Wall clock time and date at job start Thu Mar 4 2021 17:17:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46505 * 1 3 3 N 1.28467 * 124.88762 * 2 1 4 4 C 1.31806 * 110.07340 * 180.15821 * 3 2 1 5 5 C 1.47711 * 126.51967 * 179.81757 * 4 3 2 6 6 O 1.21571 * 120.00486 * 179.69146 * 5 4 3 7 7 N 1.34780 * 119.99406 * 359.69771 * 5 4 3 8 8 C 1.46507 * 119.99467 * 179.97438 * 7 5 4 9 9 H 1.08997 * 112.85150 * 37.69704 * 8 7 5 10 10 C 1.53783 * 113.61352 * 168.89562 * 8 7 5 11 11 C 1.53779 * 87.08212 * 89.11022 * 10 8 7 12 12 C 1.53001 * 113.61911 * 270.88429 * 11 10 8 13 13 C 1.53002 * 113.61334 * 140.06196 * 11 10 8 14 14 O 1.42898 * 109.47291 * 181.53061 * 13 11 10 15 15 C 1.53789 * 87.17317 * 25.47471 * 11 10 8 16 16 C 1.41503 * 106.96296 * 359.56217 * 4 3 2 17 17 C 1.35044 * 124.88092 * 179.66604 * 2 1 3 18 18 C 1.50696 * 126.38734 * 359.97438 * 17 2 1 19 19 O 1.42902 * 109.47301 * 330.00047 * 18 17 2 20 20 Si 1.86301 * 109.47126 * 210.00245 * 18 17 2 21 21 H 1.08998 * 109.46959 * 270.33271 * 1 2 3 22 22 H 1.08998 * 109.46747 * 30.33914 * 1 2 3 23 23 H 1.08999 * 109.46841 * 150.33738 * 1 2 3 24 24 H 0.96995 * 120.00216 * 359.97438 * 7 5 4 25 25 H 1.09000 * 113.61146 * 334.56728 * 10 8 7 26 26 H 1.08994 * 113.61250 * 203.66536 * 10 8 7 27 27 H 1.08999 * 109.46903 * 297.09063 * 12 11 10 28 28 H 1.08998 * 109.47322 * 177.08760 * 12 11 10 29 29 H 1.08997 * 109.46711 * 57.08452 * 12 11 10 30 30 H 1.08999 * 109.47198 * 301.53254 * 13 11 10 31 31 H 1.09004 * 109.47025 * 61.53319 * 13 11 10 32 32 H 0.96700 * 114.00328 * 180.02562 * 14 13 11 33 33 H 1.09001 * 113.61164 * 89.07378 * 15 11 10 34 34 H 1.08997 * 113.61582 * 219.97257 * 15 11 10 35 35 H 1.08002 * 127.24650 * 180.25393 * 16 4 3 36 36 H 1.08998 * 109.47486 * 90.00115 * 18 17 2 37 37 H 0.96697 * 114.00165 * 179.97438 * 19 18 17 38 38 H 1.48503 * 109.99901 * 298.68245 * 20 18 17 39 39 H 1.48503 * 110.00102 * 59.99846 * 20 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.1998 1.0538 0.0000 4 6 3.4741 0.7168 -0.0034 5 6 4.6274 1.6396 -0.0084 6 8 5.7598 1.1975 -0.0055 7 7 4.4242 2.9720 -0.0159 8 6 5.5681 3.8874 -0.0202 9 1 6.3955 3.5279 -0.6319 10 6 5.1853 5.3503 -0.3000 11 6 4.9961 5.5088 1.2179 12 6 3.5821 5.1750 1.6975 13 6 5.5091 6.8430 1.7635 14 8 5.3229 6.8817 3.1797 15 6 5.9933 4.3501 1.3863 16 6 3.5272 -0.6972 0.0046 17 6 2.2373 -1.1078 0.0065 18 6 1.7534 -2.5349 0.0153 19 8 0.4957 -2.6073 0.6899 20 14 2.9948 -3.6061 0.8997 21 1 -0.3633 0.0060 1.0276 22 1 -0.3633 0.8869 -0.5191 23 1 -0.3633 -0.8930 -0.5086 24 1 3.5206 3.3248 -0.0184 25 1 4.2618 5.4589 -0.8687 26 1 6.0041 5.9465 -0.7026 27 1 2.8728 5.8709 1.2495 28 1 3.5373 5.2593 2.7833 29 1 3.3288 4.1571 1.4013 30 1 6.5695 6.9460 1.5334 31 1 4.9560 7.6611 1.3018 32 1 5.6262 7.7012 3.5941 33 1 7.0326 4.6735 1.4440 34 1 5.7217 3.6519 2.1780 35 1 4.4108 -1.3182 0.0083 36 1 1.6363 -2.8853 -1.0101 37 1 0.1233 -3.4986 0.7333 38 1 4.2985 -3.5646 0.1898 39 1 3.1634 -3.1388 2.2991 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_17058578_13259642.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 17:17:38 Heat of formation + Delta-G solvation = -5.854864 kcal Electronic energy + Delta-G solvation = -22652.405817 eV Core-core repulsion = 19178.651627 eV Total energy + Delta-G solvation = -3473.754190 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 282.141 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -43.99605 -41.71754 -39.80989 -37.90323 -37.29471 -34.85266 -34.31939 -32.84749 -30.62688 -28.66723 -27.58608 -26.89330 -26.75485 -24.84007 -22.66510 -22.22204 -21.00842 -19.67054 -18.62432 -18.40025 -18.26537 -17.82998 -17.51769 -17.13221 -16.40349 -16.05163 -15.93423 -15.61753 -15.49611 -15.20205 -14.89003 -14.49080 -14.31094 -14.00968 -13.77918 -13.63831 -13.47201 -13.30217 -13.10007 -13.01836 -12.46597 -12.20059 -12.12222 -11.91741 -11.57819 -11.49434 -11.25933 -10.95820 -10.81675 -10.41248 -10.10139 -9.96509 -5.04523 0.26039 0.63471 1.16659 1.49663 1.65515 1.92146 2.03534 2.10032 3.00743 3.08191 3.14225 3.36632 3.50228 3.56958 3.67659 3.89279 3.98503 4.14563 4.20123 4.29001 4.34126 4.39751 4.41801 4.46132 4.51665 4.56477 4.68022 4.68459 4.72849 4.80231 4.85297 4.94890 4.99689 5.02132 5.13517 5.25682 5.49002 5.55605 6.20547 6.64117 6.82659 6.89395 6.93844 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.085 3.915 2 N -0.256 5.256 3 N -0.260 5.260 4 C -0.038 4.038 5 C 0.603 3.397 6 O -0.568 6.568 7 N -0.687 5.687 8 C 0.111 3.889 9 H 0.091 0.909 10 C -0.114 4.114 11 C -0.084 4.084 12 C -0.130 4.130 13 C 0.089 3.911 14 O -0.594 6.594 15 C -0.140 4.140 16 C -0.217 4.217 17 C 0.030 3.970 18 C -0.042 4.042 19 O -0.558 6.558 20 Si 0.811 3.189 21 H 0.093 0.907 22 H 0.104 0.896 23 H 0.126 0.874 24 H 0.415 0.585 25 H 0.091 0.909 26 H 0.122 0.878 27 H 0.071 0.929 28 H 0.051 0.949 29 H 0.053 0.947 30 H 0.059 0.941 31 H 0.061 0.939 32 H 0.394 0.606 33 H 0.100 0.900 34 H 0.045 0.955 35 H 0.155 0.845 36 H 0.120 0.880 37 H 0.416 0.584 38 H -0.293 1.293 39 H -0.313 1.313 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.908 -1.456 -2.747 7.575 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.053 4.053 2 N -0.045 5.045 3 N -0.099 5.099 4 C -0.196 4.196 5 C 0.389 3.611 6 O -0.445 6.445 7 N -0.341 5.341 8 C 0.006 3.994 9 H 0.109 0.891 10 C -0.152 4.152 11 C -0.084 4.084 12 C -0.187 4.187 13 C 0.012 3.988 14 O -0.402 6.402 15 C -0.179 4.179 16 C -0.245 4.245 17 C -0.096 4.096 18 C -0.153 4.153 19 O -0.369 6.369 20 Si 0.717 3.283 21 H 0.112 0.888 22 H 0.122 0.878 23 H 0.144 0.856 24 H 0.255 0.745 25 H 0.109 0.891 26 H 0.140 0.860 27 H 0.090 0.910 28 H 0.070 0.930 29 H 0.071 0.929 30 H 0.077 0.923 31 H 0.079 0.921 32 H 0.244 0.756 33 H 0.118 0.882 34 H 0.064 0.936 35 H 0.172 0.828 36 H 0.138 0.862 37 H 0.270 0.730 38 H -0.221 1.221 39 H -0.242 1.242 Dipole moment (debyes) X Y Z Total from point charges -6.384 -0.811 -2.402 6.869 hybrid contribution 0.625 0.563 0.172 0.858 sum -5.759 -0.249 -2.230 6.181 Atomic orbital electron populations 1.22620 0.69827 1.06943 1.05895 1.45813 1.09438 1.01497 1.47793 1.73445 1.02311 1.14782 1.19321 1.21749 0.91258 0.93942 1.12679 1.17043 0.86255 0.82264 0.75577 1.90774 1.23932 1.77867 1.51968 1.45765 1.10826 1.04272 1.73187 1.22034 0.88995 0.90194 0.98144 0.89053 1.23332 1.04312 0.92855 0.94667 1.21922 0.95929 0.94495 0.96040 1.21624 0.94493 1.01134 1.01437 1.22191 0.99609 0.96092 0.80945 1.86453 1.87271 1.45121 1.21347 1.23548 1.00296 0.97639 0.96422 1.21518 0.97165 0.94121 1.11732 1.21457 0.90219 0.91357 1.06538 1.24358 0.95377 0.91466 1.04073 1.86352 1.33780 1.37800 1.79006 0.94643 0.75452 0.83638 0.74608 0.88806 0.87788 0.85584 0.74486 0.89091 0.86003 0.90983 0.93009 0.92869 0.92253 0.92119 0.75601 0.88191 0.93600 0.82775 0.86207 0.73042 1.22111 1.24185 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.09 -0.33 10.12 127.77 1.29 0.96 16 2 N -0.26 -1.31 3.70 -355.92 -1.32 -2.63 16 3 N -0.26 -2.43 11.67 -48.18 -0.56 -2.99 16 4 C -0.04 -0.50 7.13 42.46 0.30 -0.20 16 5 C 0.60 8.74 7.82 86.75 0.68 9.42 16 6 O -0.57 -11.98 16.73 -3.94 -0.07 -12.04 16 7 N -0.69 -5.25 4.38 -442.57 -1.94 -7.19 16 8 C 0.11 0.54 4.12 45.61 0.19 0.73 16 9 H 0.09 0.64 7.83 -2.39 -0.02 0.62 16 10 C -0.11 0.21 6.95 31.12 0.22 0.43 16 11 C -0.08 -0.12 1.18 -51.65 -0.06 -0.18 16 12 C -0.13 -0.42 8.77 71.98 0.63 0.21 16 13 C 0.09 -0.06 6.49 71.98 0.47 0.40 16 14 O -0.59 -1.58 12.74 -148.98 -1.90 -3.48 16 15 C -0.14 -0.78 7.05 31.22 0.22 -0.56 16 16 C -0.22 -2.51 9.35 22.41 0.21 -2.30 16 17 C 0.03 0.17 6.21 41.40 0.26 0.42 16 18 C -0.04 0.18 2.86 71.23 0.20 0.38 16 19 O -0.56 4.41 10.38 -148.98 -1.55 2.87 16 20 Si 0.81 -2.08 31.31 68.60 2.15 0.07 16 21 H 0.09 -0.42 8.14 -2.39 -0.02 -0.44 16 22 H 0.10 -0.65 8.14 -2.39 -0.02 -0.67 16 23 H 0.13 -1.00 6.77 -2.39 -0.02 -1.02 16 24 H 0.42 1.87 6.32 -92.71 -0.59 1.28 16 25 H 0.09 -0.33 8.10 -2.39 -0.02 -0.35 16 26 H 0.12 -0.70 8.10 -2.39 -0.02 -0.72 16 27 H 0.07 0.02 8.14 -2.39 -0.02 0.00 16 28 H 0.05 0.37 7.44 -2.39 -0.02 0.36 16 29 H 0.05 0.23 4.93 -2.39 -0.01 0.22 16 30 H 0.06 -0.18 7.98 -2.39 -0.02 -0.20 16 31 H 0.06 -0.21 8.14 -2.38 -0.02 -0.23 16 32 H 0.39 -2.28 9.12 -74.06 -0.68 -2.96 16 33 H 0.10 0.35 7.99 -2.39 -0.02 0.33 16 34 H 0.05 0.51 8.10 -2.39 -0.02 0.50 16 35 H 0.15 1.88 6.91 -2.91 -0.02 1.86 16 36 H 0.12 -1.17 7.96 -2.39 -0.02 -1.19 16 37 H 0.42 -7.75 8.74 -74.06 -0.65 -8.40 16 38 H -0.29 -1.35 6.94 99.48 0.69 -0.66 16 39 H -0.31 -2.46 7.11 99.48 0.71 -1.75 16 Total: 0.00 -27.75 321.88 -1.36 -29.11 By element: Atomic # 1 Polarization: -12.64 SS G_CDS: -0.79 Total: -13.43 kcal Atomic # 6 Polarization: 5.11 SS G_CDS: 4.61 Total: 9.72 kcal Atomic # 7 Polarization: -8.99 SS G_CDS: -3.82 Total: -12.81 kcal Atomic # 8 Polarization: -9.14 SS G_CDS: -3.51 Total: -12.65 kcal Atomic # 14 Polarization: -2.08 SS G_CDS: 2.15 Total: 0.07 kcal Total: -27.75 -1.36 -29.11 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_17058578_13259642.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 23.258 kcal (2) G-P(sol) polarization free energy of solvation -27.751 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -4.493 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.362 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.113 kcal (6) G-S(sol) free energy of system = (1) + (5) -5.855 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds