Wall clock time and date at job start Thu Mar 4 2021 15:02:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 N 1.28464 * 124.88743 * 2 1 4 4 C 1.31808 * 110.07459 * 180.02562 * 3 2 1 5 5 C 1.47713 * 126.51962 * 180.02562 * 4 3 2 6 6 O 1.21570 * 119.99808 * 179.97438 * 5 4 3 7 7 N 1.34771 * 119.99886 * 359.97230 * 5 4 3 8 8 C 1.46503 * 119.99810 * 179.97438 * 7 5 4 9 9 C 1.53001 * 109.46877 * 180.02562 * 8 7 5 10 10 C 1.53004 * 109.46921 * 180.02562 * 9 8 7 11 11 S 1.81399 * 109.47058 * 180.02562 * 10 9 8 12 12 C 1.81401 * 103.00039 * 175.57886 * 11 10 9 13 13 Si 1.86294 * 109.47139 * 184.42285 * 12 11 10 14 14 C 1.86305 * 109.47297 * 59.04501 * 13 12 11 15 15 C 1.86305 * 109.47238 * 179.04679 * 13 12 11 16 16 C 1.86302 * 109.47223 * 299.04798 * 13 12 11 17 17 C 1.41508 * 106.96130 * 359.76851 * 4 3 2 18 18 C 1.35032 * 124.88171 * 180.02562 * 2 1 3 19 19 C 1.50705 * 126.38783 * 359.95958 * 18 2 1 20 20 O 1.42899 * 109.46809 * 29.99921 * 19 18 2 21 21 Si 1.86294 * 109.47193 * 149.99930 * 19 18 2 22 22 H 1.48499 * 109.47229 * 60.00412 * 21 19 18 23 23 H 1.48505 * 109.47119 * 180.02562 * 21 19 18 24 24 H 1.48507 * 109.47407 * 299.99810 * 21 19 18 25 25 H 1.08995 * 109.47288 * 269.98106 * 1 2 3 26 26 H 1.08998 * 109.46593 * 29.97766 * 1 2 3 27 27 H 1.08996 * 109.47377 * 149.97382 * 1 2 3 28 28 H 0.96997 * 120.00181 * 0.02562 * 7 5 4 29 29 H 1.08991 * 109.47421 * 300.00379 * 8 7 5 30 30 H 1.09001 * 109.46820 * 60.00962 * 8 7 5 31 31 H 1.08991 * 109.47311 * 300.00331 * 9 8 7 32 32 H 1.09001 * 109.46705 * 60.00776 * 9 8 7 33 33 H 1.09005 * 109.46928 * 300.00079 * 10 9 8 34 34 H 1.08993 * 109.47098 * 60.00079 * 10 9 8 35 35 H 1.09001 * 109.46477 * 304.42409 * 12 11 10 36 36 H 1.08996 * 109.47080 * 64.42141 * 12 11 10 37 37 H 1.09001 * 109.46854 * 60.00115 * 14 13 12 38 38 H 1.08995 * 109.47265 * 180.02562 * 14 13 12 39 39 H 1.08998 * 109.47163 * 300.00606 * 14 13 12 40 40 H 1.08999 * 109.46704 * 59.99967 * 15 13 12 41 41 H 1.09003 * 109.46979 * 180.02562 * 15 13 12 42 42 H 1.08998 * 109.46437 * 300.00185 * 15 13 12 43 43 H 1.08998 * 109.46893 * 57.55544 * 16 13 12 44 44 H 1.09001 * 109.47366 * 177.55500 * 16 13 12 45 45 H 1.09003 * 109.47139 * 297.55632 * 16 13 12 46 46 H 1.08000 * 127.24507 * 180.24373 * 17 4 3 47 47 H 1.09000 * 109.47089 * 270.00406 * 19 18 2 48 48 H 0.96699 * 114.00013 * 60.00184 * 20 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.1998 1.0538 0.0000 4 6 3.4740 0.7168 -0.0006 5 6 4.6274 1.6397 -0.0002 6 8 5.7598 1.1974 -0.0003 7 7 4.4242 2.9720 0.0002 8 6 5.5681 3.8873 0.0011 9 6 5.0650 5.3323 0.0020 10 6 6.2596 6.2882 0.0023 11 16 5.6632 8.0013 0.0042 12 6 7.1933 8.9661 0.1406 13 14 6.7754 10.7750 0.2938 14 6 5.7093 11.0409 1.7984 15 6 8.3457 11.7631 0.4630 16 6 5.8530 11.3303 -1.2266 17 6 3.5271 -0.6973 0.0045 18 6 2.2372 -1.1077 -0.0005 19 6 1.7533 -2.5350 -0.0003 20 8 0.4950 -2.6113 -0.6732 21 14 2.9939 -3.6115 -0.8793 22 1 4.3015 -3.5322 -0.1800 23 1 2.5167 -5.0178 -0.8796 24 1 3.1520 -3.1427 -2.2795 25 1 -0.3633 -0.0003 1.0276 26 1 -0.3632 0.8902 -0.5135 27 1 -0.3634 -0.8897 -0.5142 28 1 3.5207 3.3249 0.0006 29 1 6.1724 3.7128 0.8912 30 1 6.1732 3.7136 -0.8888 31 1 4.4604 5.5071 -0.8878 32 1 4.4602 5.5057 0.8921 33 1 6.8646 6.1135 0.8921 34 1 6.8641 6.1146 -0.8878 35 1 7.7476 8.6452 1.0226 36 1 7.8029 8.8081 -0.7490 37 1 6.2489 10.7160 2.6880 38 1 5.4643 12.0992 1.8878 39 1 4.7905 10.4628 1.6995 40 1 8.9694 11.6076 -0.4173 41 1 8.1011 12.8215 0.5531 42 1 8.8852 11.4382 1.3526 43 1 4.9563 10.7229 -1.3496 44 1 5.5705 12.3774 -1.1181 45 1 6.4926 11.2153 -2.1018 46 1 4.4107 -1.3182 0.0092 47 1 1.6371 -2.8791 1.0274 48 1 0.5234 -2.3198 -1.5947 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_17310320_13259642.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 15:02:19 Heat of formation + Delta-G solvation = -44.589266 kcal Electronic energy + Delta-G solvation = -24578.796260 eV Core-core repulsion = 20919.914899 eV Total energy + Delta-G solvation = -3658.881361 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 345.146 amu Computer time = 0.70 seconds Orbital eigenvalues (eV) -43.80352 -40.33908 -38.29738 -36.81822 -34.46147 -33.69410 -32.54430 -30.07831 -29.08556 -28.76270 -28.46928 -28.38546 -27.43751 -26.52871 -24.01496 -22.73306 -22.17340 -20.81737 -19.19428 -17.64240 -17.50281 -17.42144 -17.20198 -16.91343 -16.52158 -16.12130 -15.92167 -15.57823 -15.31919 -15.22315 -14.82491 -14.69530 -14.45458 -14.37850 -14.21507 -13.99848 -13.81761 -13.75791 -13.61742 -13.50043 -13.36764 -13.18018 -13.15431 -13.07601 -12.66814 -12.56816 -12.42035 -12.13007 -12.09743 -11.77625 -11.36531 -11.12585 -10.97017 -10.87767 -10.83607 -10.68497 -10.22210 -9.97384 -9.94479 -8.55741 0.54465 0.61100 0.76914 1.08704 1.39684 1.40472 1.41407 1.55892 1.72463 1.82518 1.86465 1.96489 2.20748 2.49057 2.54260 2.93285 3.29293 3.35978 3.79369 3.85643 3.86414 4.05142 4.11727 4.19721 4.24960 4.31326 4.35613 4.46814 4.49711 4.53122 4.64602 4.65358 4.65417 4.69667 4.70396 4.77993 4.79409 4.82018 4.87029 4.95367 5.03470 5.30495 5.40721 5.42660 5.56202 5.59517 5.64275 6.09771 6.47050 6.88171 7.26732 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.069 3.931 2 N -0.261 5.261 3 N -0.256 5.256 4 C -0.017 4.017 5 C 0.607 3.393 6 O -0.530 6.530 7 N -0.719 5.719 8 C 0.124 3.876 9 C -0.117 4.117 10 C -0.091 4.091 11 S -0.239 6.239 12 C -0.382 4.382 13 Si 1.020 2.980 14 C -0.445 4.445 15 C -0.442 4.442 16 C -0.446 4.446 17 C -0.179 4.179 18 C -0.020 4.020 19 C -0.056 4.056 20 O -0.538 6.538 21 Si 0.971 3.029 22 H -0.243 1.243 23 H -0.246 1.246 24 H -0.248 1.248 25 H 0.085 0.915 26 H 0.093 0.907 27 H 0.121 0.879 28 H 0.408 0.592 29 H 0.073 0.927 30 H 0.073 0.927 31 H 0.080 0.920 32 H 0.081 0.919 33 H 0.084 0.916 34 H 0.084 0.916 35 H 0.095 0.905 36 H 0.094 0.906 37 H 0.068 0.932 38 H 0.069 0.931 39 H 0.075 0.925 40 H 0.070 0.930 41 H 0.074 0.926 42 H 0.070 0.930 43 H 0.075 0.925 44 H 0.069 0.931 45 H 0.068 0.932 46 H 0.167 0.833 47 H 0.130 0.870 48 H 0.380 0.620 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.884 0.274 -0.576 2.953 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 N -0.050 5.050 3 N -0.093 5.093 4 C -0.176 4.176 5 C 0.391 3.609 6 O -0.404 6.404 7 N -0.371 5.371 8 C -0.001 4.001 9 C -0.155 4.155 10 C -0.240 4.240 11 S -0.013 6.013 12 C -0.575 4.575 13 Si 1.215 2.785 14 C -0.553 4.553 15 C -0.551 4.551 16 C -0.554 4.554 17 C -0.207 4.207 18 C -0.145 4.145 19 C -0.166 4.166 20 O -0.343 6.343 21 Si 0.789 3.211 22 H -0.166 1.166 23 H -0.170 1.170 24 H -0.171 1.171 25 H 0.103 0.897 26 H 0.112 0.888 27 H 0.139 0.861 28 H 0.244 0.756 29 H 0.091 0.909 30 H 0.091 0.909 31 H 0.099 0.901 32 H 0.100 0.900 33 H 0.102 0.898 34 H 0.102 0.898 35 H 0.113 0.887 36 H 0.113 0.887 37 H 0.087 0.913 38 H 0.088 0.912 39 H 0.094 0.906 40 H 0.089 0.911 41 H 0.093 0.907 42 H 0.089 0.911 43 H 0.094 0.906 44 H 0.089 0.911 45 H 0.087 0.913 46 H 0.184 0.816 47 H 0.147 0.853 48 H 0.228 0.772 Dipole moment (debyes) X Y Z Total from point charges -3.511 0.466 -0.496 3.577 hybrid contribution 1.196 -0.427 -0.059 1.271 sum -2.316 0.039 -0.554 2.381 Atomic orbital electron populations 1.22659 0.72354 1.06705 1.05301 1.45367 1.08026 1.02018 1.49605 1.73512 1.02854 1.14092 1.18857 1.21744 0.90746 0.93824 1.11248 1.16833 0.86613 0.81309 0.76108 1.90822 1.22566 1.77100 1.49898 1.45782 1.10689 1.05410 1.75244 1.21363 0.88441 0.87261 1.03048 1.21513 0.97439 0.92221 1.04370 1.23338 1.00749 0.94489 1.05409 1.86791 1.14764 1.02131 1.97581 1.28050 1.02170 1.19926 1.07364 0.78806 0.67787 0.63522 0.68359 1.26075 1.10151 1.04690 1.14420 1.26045 1.15272 1.09099 1.04721 1.26081 1.08806 1.05807 1.14732 1.21549 0.96479 0.94000 1.08704 1.21916 0.91257 0.91617 1.09712 1.24814 0.94115 0.93394 1.04294 1.86481 1.29988 1.88655 1.29221 0.85394 0.77114 0.78485 0.80067 1.16575 1.16958 1.17116 0.89653 0.88801 0.86126 0.75644 0.90913 0.90898 0.90112 0.90033 0.89768 0.89763 0.88655 0.88726 0.91278 0.91196 0.90551 0.91103 0.90665 0.91108 0.90615 0.91143 0.91271 0.81585 0.85254 0.77159 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 -0.20 11.00 59.85 0.66 0.46 16 2 N -0.26 -0.16 3.70 -63.86 -0.24 -0.39 16 3 N -0.26 -0.64 11.67 33.42 0.39 -0.25 16 4 C -0.02 -0.06 7.13 -82.76 -0.59 -0.65 16 5 C 0.61 2.66 7.82 -12.39 -0.10 2.56 16 6 O -0.53 -3.92 16.93 5.30 0.09 -3.83 16 7 N -0.72 -1.09 5.55 -61.29 -0.34 -1.43 16 8 C 0.12 0.04 5.67 -4.04 -0.02 0.02 16 9 C -0.12 0.12 5.34 -26.73 -0.14 -0.02 16 10 C -0.09 0.06 5.94 37.16 0.22 0.28 16 11 S -0.24 -0.13 20.84 -107.50 -2.24 -2.37 16 12 C -0.38 0.46 5.14 101.05 0.52 0.98 16 13 Si 1.02 -2.27 12.30 -169.99 -2.09 -4.36 16 14 C -0.45 0.38 8.65 101.05 0.87 1.26 16 15 C -0.44 0.80 8.65 101.05 0.87 1.68 16 16 C -0.45 0.37 8.65 101.05 0.87 1.25 16 17 C -0.18 -0.44 9.35 -39.36 -0.37 -0.80 16 18 C -0.02 -0.01 6.17 -82.21 -0.51 -0.52 16 19 C -0.06 0.12 2.99 36.01 0.11 0.23 16 20 O -0.54 1.56 10.02 -35.23 -0.35 1.21 16 21 Si 0.97 -1.62 26.64 -169.99 -4.53 -6.15 16 22 H -0.24 0.16 6.87 56.52 0.39 0.55 16 23 H -0.25 0.20 7.11 56.52 0.40 0.60 16 24 H -0.25 0.17 7.11 56.52 0.40 0.57 16 25 H 0.08 -0.28 8.14 -51.93 -0.42 -0.70 16 26 H 0.09 -0.35 8.14 -51.93 -0.42 -0.77 16 27 H 0.12 -0.53 5.00 -51.93 -0.26 -0.79 16 28 H 0.41 0.01 8.20 -40.82 -0.33 -0.33 16 29 H 0.07 0.06 8.14 -51.93 -0.42 -0.36 16 30 H 0.07 0.06 8.14 -51.93 -0.42 -0.36 16 31 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 32 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 33 H 0.08 -0.08 8.14 -51.92 -0.42 -0.51 16 34 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 35 H 0.09 -0.16 7.96 -51.92 -0.41 -0.58 16 36 H 0.09 -0.15 7.96 -51.93 -0.41 -0.57 16 37 H 0.07 -0.06 7.96 -51.93 -0.41 -0.47 16 38 H 0.07 -0.07 7.96 -51.93 -0.41 -0.49 16 39 H 0.08 0.00 7.96 -51.93 -0.41 -0.41 16 40 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 41 H 0.07 -0.13 7.96 -51.93 -0.41 -0.55 16 42 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 43 H 0.07 0.00 7.96 -51.93 -0.41 -0.41 16 44 H 0.07 -0.07 7.96 -51.93 -0.41 -0.49 16 45 H 0.07 -0.06 7.96 -51.93 -0.41 -0.47 16 46 H 0.17 0.29 6.87 -52.49 -0.36 -0.08 16 47 H 0.13 -0.40 7.96 -51.93 -0.41 -0.82 16 48 H 0.38 -2.19 8.39 45.56 0.38 -1.80 16 LS Contribution 410.41 15.07 6.18 6.18 Total: 0.00 -8.05 410.41 -8.45 -16.50 By element: Atomic # 1 Polarization: -4.09 SS G_CDS: -7.73 Total: -11.82 kcal Atomic # 6 Polarization: 4.31 SS G_CDS: 2.40 Total: 6.71 kcal Atomic # 7 Polarization: -1.89 SS G_CDS: -0.19 Total: -2.07 kcal Atomic # 8 Polarization: -2.36 SS G_CDS: -0.26 Total: -2.62 kcal Atomic # 14 Polarization: -3.89 SS G_CDS: -6.62 Total: -10.51 kcal Atomic # 16 Polarization: -0.13 SS G_CDS: -2.24 Total: -2.37 kcal Total LS contribution 6.18 Total: 6.18 kcal Total: -8.05 -8.45 -16.50 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_17310320_13259642.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -28.087 kcal (2) G-P(sol) polarization free energy of solvation -8.051 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -36.138 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.451 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.502 kcal (6) G-S(sol) free energy of system = (1) + (5) -44.589 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.70 seconds