Wall clock time and date at job start Thu Mar 4 2021 15:02:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46501 * 1 3 3 N 1.28463 * 124.88700 * 2 1 4 4 C 1.31806 * 110.07539 * 180.02562 * 3 2 1 5 5 C 1.47704 * 126.52218 * 180.02562 * 4 3 2 6 6 O 1.21580 * 120.00314 * 179.97438 * 5 4 3 7 7 N 1.34774 * 120.00189 * 359.97190 * 5 4 3 8 8 C 1.46500 * 120.00443 * 180.02562 * 7 5 4 9 9 C 1.52999 * 109.47148 * 179.97438 * 8 7 5 10 10 S 1.81404 * 109.47064 * 179.97438 * 9 8 7 11 11 C 1.81403 * 102.99855 * 174.34677 * 10 9 8 12 12 Si 1.86305 * 109.47203 * 78.44664 * 11 10 9 13 13 C 1.86299 * 109.47009 * 67.29680 * 12 11 10 14 14 C 1.86299 * 109.47023 * 187.30020 * 12 11 10 15 15 C 1.86300 * 109.46711 * 307.29979 * 12 11 10 16 16 C 1.41503 * 106.96267 * 359.76480 * 4 3 2 17 17 C 1.35035 * 124.88051 * 180.02562 * 2 1 3 18 18 C 1.50696 * 126.38835 * 359.95821 * 17 2 1 19 19 O 1.42901 * 109.46907 * 29.99945 * 18 17 2 20 20 Si 1.86300 * 109.47337 * 149.99627 * 18 17 2 21 21 H 1.48507 * 109.46773 * 60.00272 * 20 18 17 22 22 H 1.48497 * 109.47068 * 180.02562 * 20 18 17 23 23 H 1.48496 * 109.47342 * 300.00275 * 20 18 17 24 24 H 1.09000 * 109.47304 * 269.98242 * 1 2 3 25 25 H 1.08999 * 109.46704 * 29.97784 * 1 2 3 26 26 H 1.08996 * 109.47512 * 149.97444 * 1 2 3 27 27 H 0.97006 * 119.99640 * 359.97438 * 7 5 4 28 28 H 1.09002 * 109.47067 * 299.99556 * 8 7 5 29 29 H 1.09001 * 109.47438 * 59.99513 * 8 7 5 30 30 H 1.08994 * 109.47176 * 299.99693 * 9 8 7 31 31 H 1.09004 * 109.47306 * 60.00040 * 9 8 7 32 32 H 1.09003 * 109.46881 * 198.44382 * 11 10 9 33 33 H 1.08995 * 109.47008 * 318.44469 * 11 10 9 34 34 H 1.09002 * 109.47019 * 60.00590 * 13 12 11 35 35 H 1.09009 * 109.46865 * 179.97438 * 13 12 11 36 36 H 1.09002 * 109.47584 * 299.99999 * 13 12 11 37 37 H 1.09000 * 109.47073 * 59.99752 * 14 12 11 38 38 H 1.09002 * 109.46915 * 180.02562 * 14 12 11 39 39 H 1.08994 * 109.46797 * 299.99592 * 14 12 11 40 40 H 1.09001 * 109.47482 * 67.36538 * 15 12 11 41 41 H 1.09001 * 109.46842 * 187.36697 * 15 12 11 42 42 H 1.09001 * 109.47274 * 307.35763 * 15 12 11 43 43 H 1.08004 * 127.25238 * 180.25078 * 16 4 3 44 44 H 1.08994 * 109.47308 * 270.00411 * 18 17 2 45 45 H 0.96702 * 114.00478 * 60.00253 * 19 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.1998 1.0538 0.0000 4 6 3.4740 0.7168 -0.0006 5 6 4.6273 1.6396 -0.0002 6 8 5.7598 1.1974 -0.0003 7 7 4.4243 2.9720 0.0002 8 6 5.5681 3.8874 0.0000 9 6 5.0650 5.3323 -0.0001 10 16 6.4814 6.4657 0.0003 11 6 5.7010 8.0940 -0.1740 12 14 5.0106 8.6310 1.4710 13 6 6.4106 8.9477 2.6585 14 6 4.0196 10.1928 1.2484 15 6 3.9111 7.2895 2.1507 16 6 3.5272 -0.6972 0.0046 17 6 2.2372 -1.1078 -0.0005 18 6 1.7533 -2.5349 -0.0002 19 8 0.4950 -2.6112 -0.6731 20 14 2.9938 -3.6115 -0.8793 21 1 4.3015 -3.5321 -0.1800 22 1 2.5166 -5.0177 -0.8796 23 1 3.1520 -3.1427 -2.2794 24 1 -0.3634 -0.0003 1.0277 25 1 -0.3633 0.8902 -0.5135 26 1 -0.3634 -0.8897 -0.5142 27 1 3.5207 3.3249 -0.0001 28 1 6.1731 3.7130 0.8897 29 1 6.1726 3.7134 -0.8902 30 1 4.4603 5.5064 -0.8901 31 1 4.4604 5.5066 0.8899 32 1 6.4429 8.8182 -0.5105 33 1 4.8943 8.0339 -0.9045 34 1 7.0539 9.7327 2.2608 35 1 6.0066 9.2624 3.6209 36 1 6.9904 8.0339 2.7888 37 1 3.2005 10.0075 0.5535 38 1 3.6160 10.5073 2.2109 39 1 4.6629 10.9777 0.8507 40 1 4.5150 6.4180 2.4036 41 1 3.4051 7.6528 3.0452 42 1 3.1697 7.0127 1.4011 43 1 4.4108 -1.3183 0.0094 44 1 1.6372 -2.8790 1.0274 45 1 0.5233 -2.3198 -1.5948 RHF calculation, no. of doubly occupied orbitals= 57 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_17310322_13259642.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 15:02:43 Heat of formation + Delta-G solvation = -31.945666 kcal Electronic energy + Delta-G solvation = -23582.019532 eV Core-core repulsion = 20079.224057 eV Total energy + Delta-G solvation = -3502.795475 eV No. of doubly occupied orbitals = 57 Molecular weight (most abundant/longest-lived isotopes) = 331.130 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -43.82100 -40.33327 -38.30623 -36.34582 -34.44485 -32.83125 -31.76481 -30.14024 -28.87996 -28.74234 -28.46692 -28.38039 -26.84974 -24.92848 -23.22614 -22.20209 -20.98035 -19.26793 -17.65364 -17.62173 -17.33263 -17.10968 -16.76071 -16.73776 -16.11584 -15.91702 -15.42491 -15.30284 -15.03705 -14.96577 -14.55201 -14.42099 -14.28822 -14.07875 -13.89873 -13.77055 -13.68214 -13.59724 -13.28907 -13.24542 -13.16183 -12.92119 -12.68249 -12.55332 -12.44317 -12.12999 -11.78962 -11.78460 -11.17049 -11.03057 -10.97681 -10.91050 -10.69387 -10.24010 -10.00028 -9.95913 -8.47222 0.46637 0.52641 0.75962 1.07656 1.39543 1.40526 1.44823 1.47890 1.55903 1.76126 1.86443 1.93388 2.30778 2.47438 2.50361 2.92218 3.28586 3.35305 3.62789 3.82782 3.97253 4.09233 4.15475 4.23549 4.29443 4.33369 4.44774 4.51396 4.57713 4.61162 4.63453 4.64999 4.67814 4.71776 4.72321 4.79527 4.84200 4.86968 5.28388 5.36213 5.37420 5.43643 5.57328 5.62364 6.08725 6.43137 6.85832 7.24397 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.069 3.931 2 N -0.261 5.261 3 N -0.257 5.257 4 C -0.015 4.015 5 C 0.608 3.392 6 O -0.526 6.526 7 N -0.718 5.718 8 C 0.136 3.864 9 C -0.127 4.127 10 S -0.217 6.217 11 C -0.383 4.383 12 Si 1.004 2.996 13 C -0.445 4.445 14 C -0.446 4.446 15 C -0.454 4.454 16 C -0.179 4.179 17 C -0.020 4.020 18 C -0.056 4.056 19 O -0.538 6.538 20 Si 0.971 3.029 21 H -0.242 1.242 22 H -0.247 1.247 23 H -0.248 1.248 24 H 0.085 0.915 25 H 0.093 0.907 26 H 0.121 0.879 27 H 0.407 0.593 28 H 0.081 0.919 29 H 0.081 0.919 30 H 0.089 0.911 31 H 0.104 0.896 32 H 0.118 0.882 33 H 0.095 0.905 34 H 0.067 0.933 35 H 0.069 0.931 36 H 0.077 0.923 37 H 0.068 0.932 38 H 0.072 0.928 39 H 0.070 0.930 40 H 0.077 0.923 41 H 0.074 0.926 42 H 0.067 0.933 43 H 0.167 0.833 44 H 0.130 0.870 45 H 0.380 0.620 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.959 0.670 -0.438 6.012 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 N -0.050 5.050 3 N -0.094 5.094 4 C -0.175 4.175 5 C 0.392 3.608 6 O -0.399 6.399 7 N -0.371 5.371 8 C 0.012 3.988 9 C -0.275 4.275 10 S 0.009 5.991 11 C -0.578 4.578 12 Si 1.200 2.800 13 C -0.553 4.553 14 C -0.555 4.555 15 C -0.562 4.562 16 C -0.207 4.207 17 C -0.145 4.145 18 C -0.166 4.166 19 O -0.344 6.344 20 Si 0.790 3.210 21 H -0.165 1.165 22 H -0.170 1.170 23 H -0.171 1.171 24 H 0.103 0.897 25 H 0.112 0.888 26 H 0.139 0.861 27 H 0.242 0.758 28 H 0.099 0.901 29 H 0.099 0.901 30 H 0.107 0.893 31 H 0.123 0.877 32 H 0.136 0.864 33 H 0.114 0.886 34 H 0.086 0.914 35 H 0.088 0.912 36 H 0.096 0.904 37 H 0.087 0.913 38 H 0.091 0.909 39 H 0.089 0.911 40 H 0.096 0.904 41 H 0.093 0.907 42 H 0.086 0.914 43 H 0.185 0.815 44 H 0.148 0.852 45 H 0.228 0.772 Dipole moment (debyes) X Y Z Total from point charges -4.463 0.292 -0.250 4.480 hybrid contribution -1.504 0.554 -0.422 1.658 sum -5.968 0.846 -0.672 6.065 Atomic orbital electron populations 1.22657 0.72370 1.06688 1.05292 1.45361 1.08011 1.02027 1.49630 1.73497 1.02856 1.14124 1.18951 1.21715 0.90691 0.93806 1.11242 1.16815 0.86669 0.81160 0.76143 1.90839 1.22501 1.77001 1.49583 1.45778 1.10404 1.05381 1.75570 1.21006 0.88363 0.85320 1.04154 1.23954 1.00076 0.96620 1.06854 1.86848 1.14135 1.01593 1.96515 1.28094 1.08759 0.99252 1.21672 0.79195 0.67410 0.67594 0.65777 1.26075 1.13324 1.05335 1.10563 1.26093 1.08910 1.15648 1.04868 1.26350 1.09908 1.13068 1.06829 1.21560 0.96505 0.93986 1.08627 1.21918 0.91245 0.91612 1.09679 1.24816 0.94119 0.93385 1.04305 1.86482 1.29997 1.88659 1.29217 0.85389 0.77120 0.78471 0.80067 1.16539 1.16974 1.17109 0.89657 0.88845 0.86118 0.75757 0.90054 0.90091 0.89282 0.87745 0.86401 0.88589 0.91377 0.91233 0.90395 0.91290 0.90911 0.91090 0.90396 0.90700 0.91424 0.81529 0.85246 0.77163 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 -0.22 11.00 59.85 0.66 0.44 16 2 N -0.26 -0.09 3.70 -63.85 -0.24 -0.33 16 3 N -0.26 -0.56 11.67 33.42 0.39 -0.17 16 4 C -0.02 -0.05 7.13 -82.77 -0.59 -0.64 16 5 C 0.61 2.59 7.82 -12.39 -0.10 2.50 16 6 O -0.53 -3.91 16.93 5.30 0.09 -3.82 16 7 N -0.72 -0.99 5.55 -61.29 -0.34 -1.33 16 8 C 0.14 0.13 5.68 -4.04 -0.02 0.11 16 9 C -0.13 0.12 5.73 37.16 0.21 0.33 16 10 S -0.22 -0.11 20.94 -107.50 -2.25 -2.36 16 11 C -0.38 0.67 5.18 101.05 0.52 1.19 16 12 Si 1.00 -2.89 12.15 -169.99 -2.06 -4.96 16 13 C -0.44 0.51 8.65 101.05 0.87 1.38 16 14 C -0.45 0.94 8.65 101.05 0.87 1.81 16 15 C -0.45 0.99 7.09 101.05 0.72 1.71 16 16 C -0.18 -0.41 9.35 -39.36 -0.37 -0.77 16 17 C -0.02 0.00 6.17 -82.21 -0.51 -0.51 16 18 C -0.06 0.13 2.99 36.00 0.11 0.23 16 19 O -0.54 1.64 10.02 -35.23 -0.35 1.29 16 20 Si 0.97 -1.71 26.64 -169.99 -4.53 -6.24 16 21 H -0.24 0.18 6.87 56.52 0.39 0.56 16 22 H -0.25 0.21 7.11 56.52 0.40 0.61 16 23 H -0.25 0.19 7.11 56.52 0.40 0.59 16 24 H 0.08 -0.30 8.14 -51.93 -0.42 -0.72 16 25 H 0.09 -0.37 8.14 -51.93 -0.42 -0.80 16 26 H 0.12 -0.55 5.00 -51.93 -0.26 -0.81 16 27 H 0.41 -0.19 8.20 -40.82 -0.33 -0.53 16 28 H 0.08 0.15 8.14 -51.93 -0.42 -0.27 16 29 H 0.08 0.16 8.14 -51.93 -0.42 -0.26 16 30 H 0.09 -0.16 8.14 -51.93 -0.42 -0.59 16 31 H 0.10 -0.20 4.33 -51.92 -0.22 -0.43 16 32 H 0.12 -0.24 7.96 -51.92 -0.41 -0.65 16 33 H 0.10 -0.24 7.96 -51.93 -0.41 -0.65 16 34 H 0.07 -0.07 7.96 -51.93 -0.41 -0.49 16 35 H 0.07 -0.08 7.96 -51.92 -0.41 -0.50 16 36 H 0.08 -0.03 7.96 -51.93 -0.41 -0.44 16 37 H 0.07 -0.15 7.96 -51.93 -0.41 -0.56 16 38 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 39 H 0.07 -0.14 7.96 -51.93 -0.41 -0.56 16 40 H 0.08 -0.13 6.60 -51.93 -0.34 -0.47 16 41 H 0.07 -0.15 7.96 -51.93 -0.41 -0.57 16 42 H 0.07 -0.18 7.56 -51.93 -0.39 -0.57 16 43 H 0.17 0.27 6.87 -52.48 -0.36 -0.09 16 44 H 0.13 -0.42 7.96 -51.93 -0.41 -0.83 16 45 H 0.38 -2.24 8.39 45.56 0.38 -1.86 16 LS Contribution 381.44 15.07 5.75 5.75 Total: 0.00 -8.07 381.44 -7.76 -15.83 By element: Atomic # 1 Polarization: -4.85 SS G_CDS: -6.59 Total: -11.44 kcal Atomic # 6 Polarization: 5.40 SS G_CDS: 2.38 Total: 7.78 kcal Atomic # 7 Polarization: -1.64 SS G_CDS: -0.19 Total: -1.82 kcal Atomic # 8 Polarization: -2.27 SS G_CDS: -0.26 Total: -2.54 kcal Atomic # 14 Polarization: -4.60 SS G_CDS: -6.59 Total: -11.20 kcal Atomic # 16 Polarization: -0.11 SS G_CDS: -2.25 Total: -2.36 kcal Total LS contribution 5.75 Total: 5.75 kcal Total: -8.07 -7.76 -15.83 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_17310322_13259642.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -16.115 kcal (2) G-P(sol) polarization free energy of solvation -8.074 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -24.189 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.757 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.831 kcal (6) G-S(sol) free energy of system = (1) + (5) -31.946 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.63 seconds