Wall clock time and date at job start Thu Mar 4 2021 13:39:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86303 * 109.47259 * 2 1 4 4 C 1.50699 * 109.47299 * 239.99709 * 2 1 3 5 5 C 1.34455 * 126.47924 * 104.68975 * 4 2 1 6 6 N 1.36569 * 109.98165 * 179.86647 * 5 4 2 7 7 C 1.37836 * 109.86153 * 0.40919 * 6 5 4 8 8 C 1.38646 * 133.38296 * 179.75688 * 7 6 5 9 9 C 1.39320 * 119.66198 * 179.97438 * 8 7 6 10 10 C 1.47585 * 119.82650 * 180.02562 * 9 8 7 11 11 O 1.21589 * 119.99706 * 172.11146 * 10 9 8 12 12 N 1.34774 * 119.99818 * 352.10577 * 10 9 8 13 13 C 1.47222 * 136.18262 * 2.92425 * 12 10 9 14 14 C 1.53635 * 88.20033 * 206.41022 * 13 12 10 15 15 C 1.46286 * 136.17571 * 182.54723 * 12 10 9 16 16 C 1.53064 * 120.98627 * 27.45910 * 15 12 10 17 17 C 1.53924 * 86.84599 * 259.65846 * 16 15 12 18 18 C 1.52999 * 113.66225 * 220.52969 * 17 16 15 19 19 F 1.39892 * 109.47118 * 277.70770 * 18 17 16 20 20 C 1.53071 * 120.98890 * 279.41450 * 15 12 10 21 21 C 1.40198 * 120.33884 * 0.02562 * 9 8 7 22 22 C 1.36229 * 120.38069 * 0.03771 * 21 9 8 23 23 C 1.39881 * 119.95636 * 359.92871 * 22 21 9 24 24 H 0.96696 * 113.99582 * 60.00123 * 1 2 3 25 25 H 1.09002 * 109.47565 * 119.99521 * 2 1 3 26 26 H 1.48499 * 109.99573 * 298.68011 * 3 2 1 27 27 H 1.48499 * 109.99925 * 59.99489 * 3 2 1 28 28 H 1.07993 * 125.01195 * 0.02562 * 5 4 2 29 29 H 0.96998 * 125.06898 * 180.16557 * 6 5 4 30 30 H 1.08000 * 120.16766 * 359.97438 * 8 7 6 31 31 H 1.08991 * 113.43415 * 321.25048 * 13 12 10 32 32 H 1.09004 * 113.43285 * 91.57755 * 13 12 10 33 33 H 1.09007 * 114.27091 * 88.17429 * 14 13 12 34 34 H 1.09001 * 114.27504 * 221.01330 * 14 13 12 35 35 H 1.08996 * 113.65550 * 14.14511 * 16 15 12 36 36 H 1.09002 * 113.65453 * 145.17793 * 16 15 12 37 37 H 1.08997 * 113.58617 * 89.72221 * 17 16 15 38 38 H 1.08998 * 109.46980 * 37.70836 * 18 17 16 39 39 H 1.08997 * 109.47210 * 157.70561 * 18 17 16 40 40 H 1.08993 * 113.65788 * 214.82661 * 20 15 12 41 41 H 1.09006 * 113.65036 * 345.76142 * 20 15 12 42 42 H 1.08004 * 119.80785 * 180.02562 * 21 9 8 43 43 H 1.07991 * 120.02313 * 180.02562 * 22 21 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9314 -0.7105 -1.2304 5 6 2.4563 -0.1360 -2.3269 6 7 2.8029 -1.0947 -3.2356 7 6 2.4943 -2.3433 -2.7397 8 6 2.6306 -3.6281 -3.2427 9 6 2.2135 -4.7156 -2.4783 10 6 2.3574 -6.0848 -3.0100 11 8 2.1300 -7.0416 -2.2949 12 7 2.7406 -6.2746 -4.2881 13 6 3.1450 -5.4170 -5.4143 14 6 2.6517 -6.5174 -6.3663 15 6 2.9454 -7.4245 -5.1688 16 6 2.1701 -8.7272 -4.9572 17 6 3.4374 -9.2708 -4.2732 18 6 3.7513 -10.7253 -4.6290 19 9 2.9839 -11.5774 -3.8278 20 6 4.2340 -8.2480 -5.1030 21 6 1.6578 -4.5159 -1.2067 22 6 1.5191 -3.2568 -0.7055 23 6 1.9338 -2.1548 -1.4606 24 1 -0.3932 0.4417 -0.7650 25 1 1.7924 -0.5138 0.8900 26 1 1.5879 2.4585 -1.2243 27 1 1.5615 2.4679 1.2084 28 1 2.5873 0.9268 -2.4672 29 1 3.2030 -0.9225 -4.1023 30 1 3.0579 -3.7850 -4.2221 31 1 2.5702 -4.4936 -5.4842 32 1 4.2207 -5.2488 -5.4666 33 1 1.5963 -6.4428 -6.6287 34 1 3.2992 -6.6895 -7.2260 35 1 1.3193 -8.6252 -4.2836 36 1 1.9187 -9.2421 -5.8845 37 1 3.4692 -9.0815 -3.2003 38 1 3.5144 -10.9020 -5.6782 39 1 4.8098 -10.9210 -4.4577 40 1 4.5596 -8.6289 -6.0709 41 1 5.0359 -7.7616 -4.5474 42 1 1.3377 -5.3652 -0.6213 43 1 1.0908 -3.1097 0.2749 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_17321334_12335838.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:39:34 Heat of formation + Delta-G solvation = 23.269444 kcal Electronic energy + Delta-G solvation = -28055.447962 eV Core-core repulsion = 23984.706262 eV Total energy + Delta-G solvation = -4070.741700 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 331.137 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -48.59563 -42.62694 -42.13860 -39.74579 -37.98581 -37.48446 -37.10094 -33.46449 -31.64707 -30.68280 -29.97783 -29.08987 -26.89052 -26.52055 -25.10276 -24.62730 -23.70160 -22.23959 -21.52315 -20.71518 -19.27258 -19.11419 -18.29446 -17.77115 -17.22987 -17.14890 -17.00629 -16.81746 -16.54979 -16.30776 -16.09786 -15.72661 -15.51055 -15.41860 -15.13021 -15.00613 -14.77477 -14.42639 -14.22656 -13.89840 -13.62982 -13.45464 -13.37627 -13.05822 -12.82651 -12.69278 -12.57052 -12.49107 -12.17744 -12.03799 -11.80978 -11.76247 -11.44279 -10.96326 -10.86569 -10.80712 -10.45318 -9.83307 -9.37093 -8.83000 -4.83799 -0.37638 0.31982 1.36535 1.38735 1.62302 1.63926 1.83094 2.02800 2.08655 2.79350 3.16490 3.38090 3.40897 3.42961 3.52428 3.58867 3.60641 3.69775 3.81320 3.89831 4.04079 4.09950 4.16769 4.17637 4.22743 4.31505 4.39097 4.44072 4.49213 4.50296 4.57075 4.58646 4.67510 4.72432 4.76838 4.90001 4.95390 4.95705 5.00180 5.03820 5.18944 5.28389 5.37288 5.41990 5.47240 5.57409 5.93977 6.55840 6.61405 6.62851 7.01722 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.557 6.557 2 C -0.058 4.058 3 Si 0.784 3.216 4 C -0.229 4.229 5 C 0.099 3.901 6 N -0.568 5.568 7 C 0.074 3.926 8 C -0.082 4.082 9 C -0.133 4.133 10 C 0.579 3.421 11 O -0.582 6.582 12 N -0.629 5.629 13 C 0.086 3.914 14 C -0.119 4.119 15 C 0.126 3.874 16 C -0.136 4.136 17 C -0.151 4.151 18 C 0.067 3.933 19 F -0.244 7.244 20 C -0.105 4.105 21 C -0.107 4.107 22 C -0.087 4.087 23 C -0.083 4.083 24 H 0.384 0.616 25 H 0.104 0.896 26 H -0.259 1.259 27 H -0.313 1.313 28 H 0.213 0.787 29 H 0.439 0.561 30 H 0.169 0.831 31 H 0.101 0.899 32 H 0.116 0.884 33 H 0.098 0.902 34 H 0.130 0.870 35 H 0.038 0.962 36 H 0.122 0.878 37 H 0.062 0.938 38 H 0.106 0.894 39 H 0.090 0.910 40 H 0.140 0.860 41 H 0.073 0.927 42 H 0.115 0.885 43 H 0.126 0.874 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.093 7.920 -11.436 15.615 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.365 6.365 2 C -0.166 4.166 3 Si 0.687 3.313 4 C -0.236 4.236 5 C -0.031 4.031 6 N -0.172 5.172 7 C -0.033 4.033 8 C -0.103 4.103 9 C -0.137 4.137 10 C 0.372 3.628 11 O -0.463 6.463 12 N -0.362 5.362 13 C -0.034 4.034 14 C -0.157 4.157 15 C 0.041 3.959 16 C -0.173 4.173 17 C -0.170 4.170 18 C 0.012 3.988 19 F -0.226 7.226 20 C -0.144 4.144 21 C -0.127 4.127 22 C -0.106 4.106 23 C -0.089 4.089 24 H 0.233 0.767 25 H 0.122 0.878 26 H -0.185 1.185 27 H -0.241 1.241 28 H 0.229 0.771 29 H 0.281 0.719 30 H 0.186 0.814 31 H 0.119 0.881 32 H 0.134 0.866 33 H 0.117 0.883 34 H 0.148 0.852 35 H 0.057 0.943 36 H 0.140 0.860 37 H 0.080 0.920 38 H 0.124 0.876 39 H 0.109 0.891 40 H 0.158 0.842 41 H 0.092 0.908 42 H 0.133 0.867 43 H 0.144 0.856 Dipole moment (debyes) X Y Z Total from point charges 6.835 7.992 -10.424 14.807 hybrid contribution -1.480 -0.704 0.455 1.701 sum 5.355 7.288 -9.969 13.460 Atomic orbital electron populations 1.86587 1.19384 1.80586 1.49939 1.24703 0.82675 1.12109 0.97111 0.94116 0.89684 0.70287 0.77185 1.20750 1.12455 0.91187 0.99233 1.22293 0.97016 0.95770 0.88004 1.41684 1.53927 1.02673 1.18893 1.18106 1.03284 0.87281 0.94630 1.20929 1.00428 0.87975 1.00932 1.19425 1.06239 0.91742 0.96323 1.18069 0.76363 0.88679 0.79676 1.90773 1.53441 1.44193 1.57885 1.49549 1.65122 1.12207 1.09300 1.23561 1.02486 0.96226 0.81159 1.23329 1.03954 0.92800 0.95602 1.22689 0.97718 0.87887 0.87602 1.23190 0.96310 0.96495 1.01354 1.23090 0.98882 0.95082 0.99913 1.22297 0.95414 0.86104 0.94961 1.92723 1.79049 1.73400 1.77412 1.23115 0.95011 0.94147 1.02084 1.20653 0.99769 0.97318 0.94987 1.20252 0.99702 0.90603 1.00036 1.19532 1.00969 0.93911 0.94449 0.76702 0.87795 1.18488 1.24128 0.77090 0.71901 0.81380 0.88095 0.86615 0.88319 0.85208 0.94256 0.86001 0.91997 0.87614 0.89148 0.84166 0.90832 0.86666 0.85572 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -2.36 12.88 -148.98 -1.92 -4.28 16 2 C -0.06 0.00 3.06 71.24 0.22 0.21 16 3 Si 0.78 -3.78 30.83 68.60 2.11 -1.66 16 4 C -0.23 0.06 5.57 -18.65 -0.10 -0.05 16 5 C 0.10 -0.69 10.43 83.09 0.87 0.18 16 6 N -0.57 4.19 6.07 -187.71 -1.14 3.05 16 7 C 0.07 0.03 7.26 38.95 0.28 0.31 16 8 C -0.08 -0.06 9.20 22.63 0.21 0.15 16 9 C -0.13 -1.12 5.87 -20.07 -0.12 -1.23 16 10 C 0.58 6.60 7.98 86.71 0.69 7.30 16 11 O -0.58 -12.04 16.13 -4.00 -0.06 -12.11 16 12 N -0.63 -1.53 3.68 -824.23 -3.03 -4.56 16 13 C 0.09 -0.74 6.45 82.28 0.53 -0.21 16 14 C -0.12 1.17 8.25 30.83 0.25 1.42 16 15 C 0.13 -0.22 1.44 -0.47 0.00 -0.22 16 16 C -0.14 -0.40 7.21 30.93 0.22 -0.18 16 17 C -0.15 -0.56 4.09 -10.17 -0.04 -0.60 16 18 C 0.07 0.06 7.35 71.98 0.53 0.59 16 19 F -0.24 -2.67 17.36 44.97 0.78 -1.89 16 20 C -0.11 0.45 7.52 30.93 0.23 0.69 16 21 C -0.11 -1.19 9.51 22.28 0.21 -0.98 16 22 C -0.09 -0.76 10.03 22.20 0.22 -0.53 16 23 C -0.08 -0.42 6.35 -20.14 -0.13 -0.55 16 24 H 0.38 -0.95 8.70 -74.06 -0.64 -1.60 16 25 H 0.10 0.13 7.96 -2.39 -0.02 0.12 16 26 H -0.26 1.24 6.99 99.48 0.70 1.93 16 27 H -0.31 -1.49 7.11 99.48 0.71 -0.78 16 28 H 0.21 -3.03 6.27 -2.91 -0.02 -3.05 16 29 H 0.44 -6.54 8.96 -92.71 -0.83 -7.37 16 30 H 0.17 -1.12 3.83 -2.91 -0.01 -1.13 16 31 H 0.10 -1.14 6.20 -2.39 -0.01 -1.16 16 32 H 0.12 -1.51 8.14 -2.39 -0.02 -1.53 16 33 H 0.10 -0.86 8.14 -2.38 -0.02 -0.88 16 34 H 0.13 -2.06 8.14 -2.39 -0.02 -2.08 16 35 H 0.04 0.46 7.93 -2.39 -0.02 0.44 16 36 H 0.12 -0.34 7.97 -2.39 -0.02 -0.36 16 37 H 0.06 0.81 7.65 -2.39 -0.02 0.79 16 38 H 0.11 -0.55 7.95 -2.39 -0.02 -0.57 16 39 H 0.09 -0.23 8.14 -2.39 -0.02 -0.25 16 40 H 0.14 -1.64 8.10 -2.39 -0.02 -1.66 16 41 H 0.07 -0.21 8.14 -2.38 -0.02 -0.23 16 42 H 0.12 1.59 7.64 -2.91 -0.02 1.57 16 43 H 0.13 1.00 8.06 -2.91 -0.02 0.97 16 Total: 0.00 -32.41 356.54 0.45 -31.97 By element: Atomic # 1 Polarization: -16.45 SS G_CDS: -0.37 Total: -16.82 kcal Atomic # 6 Polarization: 2.22 SS G_CDS: 4.08 Total: 6.30 kcal Atomic # 7 Polarization: 2.66 SS G_CDS: -4.17 Total: -1.51 kcal Atomic # 8 Polarization: -14.40 SS G_CDS: -1.98 Total: -16.38 kcal Atomic # 9 Polarization: -2.67 SS G_CDS: 0.78 Total: -1.89 kcal Atomic # 14 Polarization: -3.78 SS G_CDS: 2.11 Total: -1.66 kcal Total: -32.41 0.45 -31.97 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_17321334_12335838.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 55.235 kcal (2) G-P(sol) polarization free energy of solvation -32.411 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 22.824 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.446 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.966 kcal (6) G-S(sol) free energy of system = (1) + (5) 23.269 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds