Wall clock time and date at job start Thu Mar 4 2021 13:39:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.34844 * 125.90195 * 2 1 4 4 C 1.40938 * 107.46779 * 179.71792 * 3 2 1 5 5 C 1.50700 * 126.26533 * 180.24121 * 4 3 2 6 6 O 1.42898 * 109.47532 * 255.02646 * 5 4 3 7 7 Si 1.86305 * 109.47242 * 15.03118 * 5 4 3 8 8 C 1.34851 * 107.46671 * 0.26927 * 4 3 2 9 9 C 1.50705 * 125.89709 * 180.02562 * 8 4 3 10 10 N 1.36557 * 108.19772 * 359.97438 * 8 4 3 11 11 C 1.40233 * 125.66407 * 180.02562 * 10 8 4 12 12 C 1.38546 * 119.99527 * 244.72939 * 11 10 8 13 13 C 1.39509 * 119.78450 * 179.72926 * 12 11 10 14 14 C 1.47853 * 120.11468 * 180.27309 * 13 12 11 15 15 O 1.21554 * 120.00005 * 6.92963 * 14 13 12 16 16 N 1.34771 * 119.99911 * 186.93366 * 14 13 12 17 17 C 1.47220 * 136.18385 * 5.20297 * 16 14 13 18 18 C 1.53882 * 88.10762 * 153.66695 * 17 16 14 19 19 C 1.46289 * 136.17830 * 185.57537 * 16 14 13 20 20 C 1.53071 * 120.98301 * 80.55279 * 19 16 14 21 21 C 1.53924 * 86.84265 * 259.66579 * 20 19 16 22 22 C 1.53000 * 113.65747 * 220.52587 * 21 20 19 23 23 F 1.39898 * 109.46828 * 162.70701 * 22 21 20 24 24 C 1.53076 * 120.98651 * 332.51601 * 19 16 14 25 25 C 1.39578 * 119.77040 * 0.54371 * 13 12 11 26 26 C 1.38014 * 119.98537 * 359.73114 * 25 13 12 27 27 C 1.38223 * 120.21782 * 359.97438 * 26 25 13 28 28 H 1.09004 * 109.47824 * 90.01705 * 1 2 3 29 29 H 1.09003 * 109.47288 * 210.02490 * 1 2 3 30 30 H 1.09000 * 109.46828 * 330.01613 * 1 2 3 31 31 H 1.08002 * 126.26442 * 359.97438 * 3 2 1 32 32 H 1.09005 * 109.47174 * 135.02298 * 5 4 3 33 33 H 0.96703 * 113.99923 * 60.00319 * 6 5 4 34 34 H 1.48501 * 109.99964 * 179.97438 * 7 5 4 35 35 H 1.48502 * 109.99812 * 301.31395 * 7 5 4 36 36 H 1.09000 * 109.46913 * 89.96958 * 9 8 4 37 37 H 1.08994 * 109.46931 * 209.97016 * 9 8 4 38 38 H 1.08997 * 109.46681 * 329.97067 * 9 8 4 39 39 H 1.08001 * 120.10841 * 359.97438 * 12 11 10 40 40 H 1.09002 * 113.43042 * 268.45329 * 17 16 14 41 41 H 1.08993 * 113.43227 * 38.77766 * 17 16 14 42 42 H 1.09005 * 114.46459 * 272.02415 * 18 17 16 43 43 H 1.08995 * 114.18708 * 139.08275 * 18 17 16 44 44 H 1.08995 * 113.65826 * 14.15353 * 20 19 16 45 45 H 1.08996 * 113.65331 * 145.18316 * 20 19 16 46 46 H 1.08998 * 113.58847 * 89.72361 * 21 20 19 47 47 H 1.08999 * 109.47774 * 282.70710 * 22 21 20 48 48 H 1.09000 * 109.47368 * 42.71049 * 22 21 20 49 49 H 1.08996 * 113.65391 * 214.81995 * 24 19 16 50 50 H 1.09004 * 113.64903 * 345.84435 * 24 19 16 51 51 H 1.08004 * 120.00289 * 179.70281 * 25 13 12 52 52 H 1.08003 * 119.88962 * 180.02562 * 26 25 13 53 53 H 1.08003 * 119.88241 * 180.02562 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2977 1.0923 0.0000 4 6 3.6348 0.6466 0.0066 5 6 4.8647 1.5175 0.0141 6 8 5.4615 1.5101 -1.2842 7 14 4.3888 3.2603 0.4691 8 6 3.6120 -0.7017 0.0044 9 6 4.8177 -1.6058 0.0101 10 7 2.3078 -1.1062 -0.0028 11 6 1.8644 -2.4366 -0.0066 12 6 1.1650 -2.9305 -1.0959 13 6 0.7309 -4.2563 -1.0975 14 6 -0.0108 -4.7927 -2.2587 15 8 -0.1342 -4.1207 -3.2641 16 7 -0.5500 -6.0265 -2.2023 17 6 -0.6999 -7.0746 -1.1794 18 6 -1.9426 -7.5687 -1.9408 19 6 -1.2400 -6.9203 -3.1325 20 6 -0.4570 -7.7666 -4.1394 21 6 -0.8256 -6.7040 -5.1902 22 6 -1.1993 -7.2915 -6.5525 23 9 -1.8831 -6.3294 -7.3035 24 6 -2.0425 -6.3640 -4.3113 25 6 0.9942 -5.0731 0.0033 26 6 1.6866 -4.5697 1.0858 27 6 2.1219 -3.2577 1.0842 28 1 -0.3635 -0.0003 -1.0277 29 1 -0.3634 -0.8898 0.5142 30 1 -0.3633 0.8901 0.5136 31 1 1.9670 2.1204 -0.0004 32 1 5.5774 1.1333 0.7439 33 1 4.8827 1.8400 -1.9851 34 1 5.5931 4.1290 0.4806 35 1 3.3932 3.7844 -0.5002 36 1 5.1026 -1.8249 1.0391 37 1 4.5774 -2.5352 -0.5061 38 1 5.6452 -1.1111 -0.4985 39 1 0.9600 -2.2923 -1.9428 40 1 0.1188 -7.7942 -1.1729 41 1 -0.9248 -6.6831 -0.1874 42 1 -2.8734 -7.0816 -1.6501 43 1 -2.0249 -8.6536 -2.0050 44 1 0.6110 -7.8208 -3.9283 45 1 -0.9024 -8.7429 -4.3300 46 1 -0.1006 -5.8934 -5.2638 47 1 -0.2936 -7.5886 -7.0811 48 1 -1.8388 -8.1626 -6.4095 49 1 -2.9312 -6.9483 -4.5499 50 1 -2.2438 -5.2952 -4.2376 51 1 0.6556 -6.0987 0.0081 52 1 1.8899 -5.2031 1.9366 53 1 2.6637 -2.8695 1.9340 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_17321334_12335854.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:39:43 Heat of formation + Delta-G solvation = 40.357147 kcal Electronic energy + Delta-G solvation = -35999.505958 eV Core-core repulsion = 31334.666239 eV Total energy + Delta-G solvation = -4664.839719 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 385.184 amu Computer time = 1.57 seconds Orbital eigenvalues (eV) -48.62490 -42.96302 -42.39823 -40.46419 -39.02018 -37.86551 -37.14796 -34.45878 -33.76285 -32.55075 -31.20983 -30.22291 -30.15053 -29.14646 -27.29396 -26.90269 -25.38914 -24.99312 -24.56831 -23.59830 -22.59998 -21.53947 -21.19339 -20.54969 -19.12389 -18.33437 -17.75462 -17.64752 -17.36933 -17.32828 -17.03460 -16.96999 -16.67674 -16.54861 -16.25565 -16.02965 -15.65507 -15.34089 -15.29524 -15.10278 -14.93561 -14.74733 -14.39089 -14.32747 -14.19040 -14.06117 -13.84817 -13.66594 -13.51115 -13.48574 -13.43108 -13.26411 -13.21632 -13.04672 -12.81339 -12.63774 -12.50051 -12.41008 -12.20944 -12.07979 -11.80613 -11.73362 -11.55999 -11.06188 -10.88044 -10.55275 -10.43477 -10.33453 -9.80657 -9.57793 -8.89044 -4.87252 -0.48484 -0.11226 1.03500 1.40204 1.48016 1.56630 1.66558 1.71661 1.79408 2.01166 2.50623 3.09787 3.28136 3.34347 3.40378 3.52526 3.56484 3.59199 3.61927 3.65617 3.82574 3.86947 3.92540 4.04432 4.06181 4.08529 4.12086 4.15872 4.20871 4.28324 4.36168 4.37602 4.44457 4.51791 4.55378 4.57426 4.61856 4.63054 4.66405 4.67118 4.67670 4.73265 4.83769 4.92581 4.93539 4.95376 4.97945 5.00014 5.02112 5.05706 5.09158 5.12914 5.26900 5.29842 5.34334 5.51605 5.92774 6.09167 6.40576 6.52116 6.54918 6.90160 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.083 4.083 2 C 0.013 3.987 3 C -0.198 4.198 4 C -0.201 4.201 5 C -0.046 4.046 6 O -0.552 6.552 7 Si 0.777 3.223 8 C 0.041 3.959 9 C -0.083 4.083 10 N -0.406 5.406 11 C 0.099 3.901 12 C -0.070 4.070 13 C -0.130 4.130 14 C 0.576 3.424 15 O -0.582 6.582 16 N -0.627 5.627 17 C 0.087 3.913 18 C -0.121 4.121 19 C 0.127 3.873 20 C -0.103 4.103 21 C -0.152 4.152 22 C 0.066 3.934 23 F -0.242 7.242 24 C -0.135 4.135 25 C -0.077 4.077 26 C -0.098 4.098 27 C -0.081 4.081 28 H 0.063 0.937 29 H 0.063 0.937 30 H 0.100 0.900 31 H 0.151 0.849 32 H 0.118 0.882 33 H 0.381 0.619 34 H -0.303 1.303 35 H -0.291 1.291 36 H 0.092 0.908 37 H 0.058 0.942 38 H 0.081 0.919 39 H 0.107 0.893 40 H 0.120 0.880 41 H 0.106 0.894 42 H 0.098 0.902 43 H 0.130 0.870 44 H 0.076 0.924 45 H 0.141 0.859 46 H 0.060 0.940 47 H 0.085 0.915 48 H 0.108 0.892 49 H 0.117 0.883 50 H 0.039 0.961 51 H 0.173 0.827 52 H 0.181 0.819 53 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.430 -11.508 9.377 15.043 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.140 4.140 2 C -0.095 4.095 3 C -0.222 4.222 4 C -0.208 4.208 5 C -0.156 4.156 6 O -0.360 6.360 7 Si 0.683 3.317 8 C -0.069 4.069 9 C -0.140 4.140 10 N -0.081 5.081 11 C 0.010 3.990 12 C -0.090 4.090 13 C -0.134 4.134 14 C 0.368 3.632 15 O -0.463 6.463 16 N -0.360 5.360 17 C -0.033 4.033 18 C -0.158 4.158 19 C 0.042 3.958 20 C -0.142 4.142 21 C -0.170 4.170 22 C 0.012 3.988 23 F -0.224 7.224 24 C -0.173 4.173 25 C -0.094 4.094 26 C -0.116 4.116 27 C -0.100 4.100 28 H 0.082 0.918 29 H 0.082 0.918 30 H 0.119 0.881 31 H 0.169 0.831 32 H 0.136 0.864 33 H 0.230 0.770 34 H -0.231 1.231 35 H -0.218 1.218 36 H 0.110 0.890 37 H 0.077 0.923 38 H 0.100 0.900 39 H 0.126 0.874 40 H 0.138 0.862 41 H 0.124 0.876 42 H 0.116 0.884 43 H 0.148 0.852 44 H 0.095 0.905 45 H 0.159 0.841 46 H 0.078 0.922 47 H 0.103 0.897 48 H 0.126 0.874 49 H 0.135 0.865 50 H 0.058 0.942 51 H 0.190 0.810 52 H 0.198 0.802 53 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges -2.053 -10.637 8.920 14.033 hybrid contribution 0.095 0.939 -2.116 2.317 sum -1.957 -9.698 6.804 12.007 Atomic orbital electron populations 1.20355 0.87004 1.04097 1.02534 1.20731 0.94292 0.85119 1.09389 1.20802 0.92110 0.98150 1.11099 1.19678 0.94993 0.92794 1.13325 1.24490 0.94480 1.09450 0.87164 1.86523 1.44559 1.87189 1.17736 0.93872 0.76937 0.71882 0.88990 1.20612 0.84304 0.94449 1.07535 1.20366 0.92871 0.97054 1.03695 1.41533 1.05738 1.03227 1.57575 1.17640 1.01843 0.83867 0.95691 1.21067 0.96430 0.94968 0.96572 1.19697 1.03224 0.94350 0.96132 1.18127 0.77647 0.80567 0.86881 1.90791 1.61211 1.59261 1.35054 1.49529 1.56330 1.12884 1.17228 1.23634 0.98777 0.87363 0.93574 1.23323 0.96961 1.03460 0.92097 1.22654 0.92494 0.89063 0.91631 1.23133 1.01253 0.98174 0.91600 1.23085 0.99203 0.99938 0.94824 1.22254 0.97539 0.89349 0.89657 1.92727 1.82665 1.68147 1.78840 1.23110 0.97858 1.00872 0.95434 1.22231 0.95060 1.01263 0.90888 1.21522 0.96176 0.94387 0.99488 1.21706 0.97867 0.94363 0.96098 0.91820 0.91847 0.88133 0.83141 0.86399 0.77047 1.23116 1.21796 0.88966 0.92334 0.90043 0.87443 0.86241 0.87635 0.88383 0.85215 0.90515 0.84149 0.92156 0.89699 0.87352 0.86454 0.94199 0.81040 0.80212 0.83236 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.25 9.93 71.24 0.71 0.46 16 2 C 0.01 0.09 6.81 41.04 0.28 0.37 16 3 C -0.20 -1.24 9.27 22.15 0.21 -1.03 16 4 C -0.20 -1.26 5.35 -19.98 -0.11 -1.36 16 5 C -0.05 -0.20 2.50 71.24 0.18 -0.02 16 6 O -0.55 -4.19 12.88 -148.98 -1.92 -6.11 16 7 Si 0.78 2.02 30.86 68.60 2.12 4.14 16 8 C 0.04 0.26 6.81 41.05 0.28 0.54 16 9 C -0.08 -0.20 9.72 71.24 0.69 0.49 16 10 N -0.41 -2.68 2.79 -320.38 -0.89 -3.57 16 11 C 0.10 0.41 4.66 38.04 0.18 0.59 16 12 C -0.07 -0.53 9.26 22.65 0.21 -0.32 16 13 C -0.13 -0.52 5.87 -20.10 -0.12 -0.64 16 14 C 0.58 4.89 8.00 86.79 0.69 5.59 16 15 O -0.58 -10.86 16.18 -3.89 -0.06 -10.92 16 16 N -0.63 -0.05 3.67 -824.03 -3.02 -3.07 16 17 C 0.09 -0.95 6.12 82.35 0.50 -0.44 16 18 C -0.12 1.33 8.24 30.82 0.25 1.59 16 19 C 0.13 -0.40 1.44 -0.57 0.00 -0.40 16 20 C -0.10 0.59 7.52 30.93 0.23 0.83 16 21 C -0.15 -0.39 4.11 -10.18 -0.04 -0.43 16 22 C 0.07 0.02 7.33 71.98 0.53 0.55 16 23 F -0.24 -2.37 17.30 44.97 0.78 -1.59 16 24 C -0.13 -0.33 7.11 30.93 0.22 -0.11 16 25 C -0.08 0.37 9.16 22.54 0.21 0.58 16 26 C -0.10 0.70 10.02 22.21 0.22 0.92 16 27 C -0.08 0.19 9.71 22.44 0.22 0.40 16 28 H 0.06 0.28 8.14 -2.38 -0.02 0.26 16 29 H 0.06 0.17 7.84 -2.39 -0.02 0.15 16 30 H 0.10 -0.08 8.14 -2.39 -0.02 -0.10 16 31 H 0.15 0.54 6.52 -2.91 -0.02 0.53 16 32 H 0.12 0.23 7.96 -2.38 -0.02 0.21 16 33 H 0.38 1.36 8.70 -74.06 -0.64 0.71 16 34 H -0.30 -2.79 7.11 99.48 0.71 -2.08 16 35 H -0.29 -2.12 7.01 99.48 0.70 -1.42 16 36 H 0.09 -0.17 8.14 -2.39 -0.02 -0.19 16 37 H 0.06 0.17 7.83 -2.39 -0.02 0.16 16 38 H 0.08 0.31 7.87 -2.39 -0.02 0.30 16 39 H 0.11 1.46 7.67 -2.91 -0.02 1.44 16 40 H 0.12 -1.87 8.13 -2.39 -0.02 -1.89 16 41 H 0.11 -1.48 6.79 -2.39 -0.02 -1.50 16 42 H 0.10 -0.95 8.14 -2.38 -0.02 -0.97 16 43 H 0.13 -2.18 8.14 -2.39 -0.02 -2.20 16 44 H 0.08 -0.37 8.14 -2.39 -0.02 -0.39 16 45 H 0.14 -1.78 8.04 -2.39 -0.02 -1.80 16 46 H 0.06 0.68 7.94 -2.39 -0.02 0.66 16 47 H 0.08 -0.19 8.14 -2.39 -0.02 -0.21 16 48 H 0.11 -0.69 8.06 -2.39 -0.02 -0.71 16 49 H 0.12 -0.27 8.10 -2.39 -0.02 -0.29 16 50 H 0.04 0.45 7.70 -2.39 -0.02 0.43 16 51 H 0.17 -1.95 4.18 -2.91 -0.01 -1.96 16 52 H 0.18 -2.62 8.06 -2.91 -0.02 -2.64 16 53 H 0.15 -0.75 8.06 -2.91 -0.02 -0.77 16 Total: 0.00 -30.14 433.19 2.86 -27.28 By element: Atomic # 1 Polarization: -14.61 SS G_CDS: 0.32 Total: -14.29 kcal Atomic # 6 Polarization: 2.60 SS G_CDS: 5.54 Total: 8.14 kcal Atomic # 7 Polarization: -2.73 SS G_CDS: -3.92 Total: -6.64 kcal Atomic # 8 Polarization: -15.05 SS G_CDS: -1.98 Total: -17.03 kcal Atomic # 9 Polarization: -2.37 SS G_CDS: 0.78 Total: -1.59 kcal Atomic # 14 Polarization: 2.02 SS G_CDS: 2.12 Total: 4.14 kcal Total: -30.14 2.86 -27.28 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_17321334_12335854.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 67.642 kcal (2) G-P(sol) polarization free energy of solvation -30.141 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 37.501 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.856 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.285 kcal (6) G-S(sol) free energy of system = (1) + (5) 40.357 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.57 seconds