Wall clock time and date at job start Thu Mar 4 2021 13:39:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50706 * 1 3 3 C 1.34810 * 125.89877 * 2 1 4 4 C 1.40997 * 107.48345 * 180.25116 * 3 2 1 5 5 C 1.50697 * 126.25725 * 179.73621 * 4 3 2 6 6 O 1.42898 * 109.46949 * 254.99657 * 5 4 3 7 7 Si 1.86301 * 109.47171 * 15.00207 * 5 4 3 8 8 C 1.34812 * 107.48194 * 359.73612 * 4 3 2 9 9 C 1.50706 * 125.89759 * 179.97438 * 8 4 3 10 10 N 1.36648 * 108.19727 * 0.02562 * 8 4 3 11 11 C 1.39661 * 125.68302 * 180.02562 * 10 8 4 12 12 C 1.40197 * 120.15575 * 270.02402 * 11 10 8 13 13 C 1.47582 * 120.19001 * 0.03761 * 12 11 10 14 14 O 1.21577 * 120.00328 * 327.16882 * 13 12 11 15 15 N 1.34777 * 119.99884 * 147.17002 * 13 12 11 16 16 C 1.47222 * 136.17928 * 4.32878 * 15 13 12 17 17 C 1.53633 * 88.20046 * 206.41497 * 16 15 13 18 18 C 1.46280 * 136.18110 * 183.94942 * 15 13 12 19 19 C 1.53081 * 120.98485 * 27.45484 * 18 15 13 20 20 C 1.53914 * 86.84604 * 259.66112 * 19 18 15 21 21 C 1.52995 * 113.66064 * 220.52733 * 20 19 18 22 22 F 1.39898 * 109.47118 * 162.70533 * 21 20 19 23 23 C 1.53070 * 120.99084 * 279.41629 * 18 15 13 24 24 C 1.39664 * 119.62037 * 180.02562 * 12 11 10 25 25 C 1.37825 * 119.91189 * 359.96893 * 24 12 11 26 26 C 1.38538 * 120.31491 * 359.97438 * 25 24 12 27 27 C 1.38072 * 120.38937 * 0.02562 * 26 25 24 28 28 H 1.08998 * 109.47282 * 270.19821 * 1 2 3 29 29 H 1.09000 * 109.47110 * 30.20360 * 1 2 3 30 30 H 1.09003 * 109.46602 * 150.19856 * 1 2 3 31 31 H 1.08001 * 126.26106 * 359.97438 * 3 2 1 32 32 H 1.09001 * 109.46684 * 135.00168 * 5 4 3 33 33 H 0.96699 * 113.99723 * 179.97438 * 6 5 4 34 34 H 1.48500 * 109.99701 * 178.68014 * 7 5 4 35 35 H 1.48494 * 109.99767 * 299.99874 * 7 5 4 36 36 H 1.08997 * 109.47105 * 269.99725 * 9 8 4 37 37 H 1.08998 * 109.46892 * 30.00459 * 9 8 4 38 38 H 1.09000 * 109.46338 * 150.00284 * 9 8 4 39 39 H 1.09000 * 113.43050 * 321.24678 * 16 15 13 40 40 H 1.09000 * 113.43719 * 91.58294 * 16 15 13 41 41 H 1.08999 * 114.27757 * 88.16367 * 17 16 15 42 42 H 1.09005 * 114.27840 * 221.01844 * 17 16 15 43 43 H 1.09002 * 113.64846 * 14.14989 * 19 18 15 44 44 H 1.09000 * 113.65329 * 145.16911 * 19 18 15 45 45 H 1.08999 * 113.58713 * 89.71469 * 20 19 18 46 46 H 1.09001 * 109.46988 * 282.70842 * 21 20 19 47 47 H 1.09000 * 109.46969 * 42.70495 * 21 20 19 48 48 H 1.08996 * 113.65425 * 214.82052 * 23 18 15 49 49 H 1.09003 * 113.65117 * 345.75735 * 23 18 15 50 50 H 1.07996 * 120.04206 * 180.25616 * 24 12 11 51 51 H 1.07998 * 119.84238 * 180.02562 * 25 24 12 52 52 H 1.08001 * 119.80217 * 179.97438 * 26 25 24 53 53 H 1.07999 * 119.96270 * 180.02562 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.2975 1.0920 0.0000 4 6 3.6353 0.6466 -0.0059 5 6 4.8647 1.5180 -0.0136 6 8 5.4485 1.5066 -1.3179 7 14 4.3926 3.2621 0.4403 8 6 3.6133 -0.7013 -0.0034 9 6 4.8196 -1.6047 -0.0083 10 7 2.3084 -1.1069 0.0033 11 6 1.8672 -2.4319 0.0082 12 6 1.6398 -3.1030 -1.2015 13 6 1.8661 -2.4135 -2.4866 14 8 1.6628 -1.2185 -2.5794 15 7 2.2982 -3.1087 -3.5574 16 6 2.5739 -4.5216 -3.8658 17 6 3.5788 -4.0439 -4.9252 18 6 2.6945 -2.7945 -4.9299 19 6 3.2698 -1.4222 -5.2896 20 6 1.8685 -1.0679 -5.8186 21 6 1.8886 -0.2697 -7.1236 22 9 0.6285 -0.3321 -7.7280 23 6 1.6453 -2.5771 -6.0231 24 6 1.1981 -4.4278 -1.1835 25 6 0.9894 -5.0665 0.0198 26 6 1.2163 -4.4007 1.2134 27 6 1.6530 -3.0909 1.2105 28 1 -0.3634 0.0036 1.0276 29 1 -0.3633 0.8882 -0.5170 30 1 -0.3633 -0.8918 -0.5108 31 1 1.9666 2.1201 -0.0004 32 1 5.5850 1.1365 0.7101 33 1 6.2458 2.0480 -1.3967 34 1 5.6011 4.1247 0.4673 35 1 3.4109 3.7937 -0.5389 36 1 5.1048 -1.8244 -1.0371 37 1 5.6466 -1.1093 0.5002 38 1 4.5796 -2.5339 0.5085 39 1 3.0379 -5.0627 -3.0412 40 1 1.7177 -5.0485 -4.2870 41 1 4.5876 -3.8821 -4.5453 42 1 3.5536 -4.6119 -5.8552 43 1 3.5717 -0.8339 -4.4230 44 1 4.0341 -1.4582 -6.0658 45 1 1.2156 -0.6289 -5.0643 46 1 2.1380 0.7697 -6.9100 47 1 2.6355 -0.6916 -7.7962 48 1 1.9555 -2.9359 -7.0045 49 1 0.6471 -2.9147 -5.7444 50 1 1.0247 -4.9526 -2.1114 51 1 0.6482 -6.0911 0.0324 52 1 1.0497 -4.9090 2.1516 53 1 1.8281 -2.5786 2.1450 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_17321334_12335856.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:39:48 Heat of formation + Delta-G solvation = 44.072441 kcal Electronic energy + Delta-G solvation = -38278.797519 eV Core-core repulsion = 33614.118907 eV Total energy + Delta-G solvation = -4664.678612 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 385.184 amu Computer time = 1.57 seconds Orbital eigenvalues (eV) -48.67147 -42.95517 -42.23789 -40.28768 -38.87609 -37.85056 -37.11710 -34.36713 -33.67896 -32.84597 -30.77737 -30.32848 -30.15001 -29.14538 -27.29495 -27.02018 -25.27783 -24.77676 -24.48789 -23.52848 -22.65965 -21.60581 -20.95426 -20.04357 -19.32786 -18.51255 -18.28615 -17.89945 -17.37320 -17.26354 -17.10688 -16.82612 -16.44831 -16.39860 -16.13165 -15.83610 -15.66884 -15.30274 -15.20186 -15.08879 -14.87981 -14.71590 -14.31599 -14.28523 -14.18788 -13.84952 -13.74488 -13.69644 -13.55455 -13.47962 -13.44132 -13.28057 -13.16125 -12.91172 -12.78554 -12.58687 -12.46446 -12.43505 -12.38163 -12.13386 -11.92148 -11.80188 -11.68819 -10.98252 -10.90390 -10.37629 -10.22333 -10.12049 -9.77321 -9.63869 -8.76150 -4.92288 -0.38682 0.02248 1.10477 1.36413 1.56093 1.60224 1.63104 1.77950 1.88120 2.01623 2.50509 3.09945 3.28229 3.32248 3.34664 3.55123 3.57552 3.62003 3.67027 3.74646 3.95508 3.95892 3.98258 4.01887 4.10246 4.12960 4.17421 4.18758 4.21929 4.23139 4.32314 4.33192 4.43050 4.48698 4.50080 4.57618 4.60155 4.60967 4.63886 4.65320 4.68306 4.70354 4.79172 4.89525 4.90662 4.92618 4.94041 4.98139 5.08000 5.15260 5.17139 5.22295 5.25962 5.31222 5.36215 5.62445 6.01584 6.17476 6.55046 6.60703 6.67434 7.00168 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 C 0.049 3.951 3 C -0.215 4.215 4 C -0.166 4.166 5 C -0.045 4.045 6 O -0.561 6.561 7 Si 0.770 3.230 8 C 0.036 3.964 9 C -0.070 4.070 10 N -0.397 5.397 11 C 0.138 3.862 12 C -0.136 4.136 13 C 0.569 3.431 14 O -0.550 6.550 15 N -0.628 5.628 16 C 0.095 3.905 17 C -0.121 4.121 18 C 0.132 3.868 19 C -0.122 4.122 20 C -0.146 4.146 21 C 0.070 3.930 22 F -0.235 7.235 23 C -0.112 4.112 24 C -0.081 4.081 25 C -0.103 4.103 26 C -0.077 4.077 27 C -0.116 4.116 28 H 0.088 0.912 29 H 0.075 0.925 30 H 0.048 0.952 31 H 0.135 0.865 32 H 0.086 0.914 33 H 0.387 0.613 34 H -0.280 1.280 35 H -0.314 1.314 36 H 0.054 0.946 37 H 0.091 0.909 38 H 0.069 0.931 39 H 0.095 0.905 40 H 0.109 0.891 41 H 0.098 0.902 42 H 0.124 0.876 43 H 0.041 0.959 44 H 0.124 0.876 45 H 0.061 0.939 46 H 0.072 0.928 47 H 0.108 0.892 48 H 0.128 0.872 49 H 0.063 0.937 50 H 0.152 0.848 51 H 0.171 0.829 52 H 0.168 0.832 53 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.805 -10.800 2.883 11.525 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.130 4.130 2 C -0.060 4.060 3 C -0.238 4.238 4 C -0.172 4.172 5 C -0.155 4.155 6 O -0.370 6.370 7 Si 0.676 3.324 8 C -0.073 4.073 9 C -0.127 4.127 10 N -0.071 5.071 11 C 0.048 3.952 12 C -0.140 4.140 13 C 0.360 3.640 14 O -0.428 6.428 15 N -0.363 5.363 16 C -0.026 4.026 17 C -0.159 4.159 18 C 0.047 3.953 19 C -0.160 4.160 20 C -0.165 4.165 21 C 0.016 3.984 22 F -0.216 7.216 23 C -0.150 4.150 24 C -0.100 4.100 25 C -0.121 4.121 26 C -0.096 4.096 27 C -0.135 4.135 28 H 0.107 0.893 29 H 0.094 0.906 30 H 0.068 0.932 31 H 0.153 0.847 32 H 0.104 0.896 33 H 0.236 0.764 34 H -0.206 1.206 35 H -0.242 1.242 36 H 0.072 0.928 37 H 0.110 0.890 38 H 0.088 0.912 39 H 0.113 0.887 40 H 0.127 0.873 41 H 0.117 0.883 42 H 0.142 0.858 43 H 0.060 0.940 44 H 0.142 0.858 45 H 0.079 0.921 46 H 0.090 0.910 47 H 0.126 0.874 48 H 0.146 0.854 49 H 0.082 0.918 50 H 0.169 0.831 51 H 0.188 0.812 52 H 0.186 0.814 53 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges 1.973 -9.922 2.680 10.465 hybrid contribution 0.390 0.896 -0.949 1.362 sum 2.364 -9.025 1.731 9.489 Atomic orbital electron populations 1.20223 0.87494 1.02435 1.02880 1.20392 0.93828 0.84889 1.06928 1.20583 0.92620 0.97645 1.12988 1.18635 0.93484 0.92283 1.12806 1.24218 0.94592 1.09884 0.86785 1.86631 1.46625 1.72239 1.31484 0.94020 0.77985 0.72308 0.88075 1.20427 0.84500 0.94158 1.08225 1.20198 0.93185 0.97556 1.01751 1.41067 1.05260 1.03109 1.57710 1.17779 1.00781 0.83253 0.93359 1.20148 1.06019 0.96292 0.91555 1.18104 0.76365 0.86050 0.83483 1.90866 1.51397 1.15899 1.84678 1.49569 1.65169 1.11643 1.09890 1.23359 0.98911 0.81940 0.98421 1.23302 0.97545 0.93828 1.01193 1.22594 0.94964 0.96038 0.81751 1.22998 0.96064 0.95969 1.00960 1.23009 0.99226 0.97245 0.96996 1.22141 0.81001 1.01953 0.93334 1.92728 1.45645 1.97980 1.85263 1.23130 0.98715 0.93673 0.99519 1.21613 0.96448 0.91069 1.00870 1.21688 0.97517 1.01946 0.90902 1.21702 0.94659 0.92643 1.00581 1.21490 0.99555 0.96185 0.96281 0.89300 0.90632 0.93247 0.84712 0.89644 0.76372 1.20633 1.24226 0.92756 0.88989 0.91223 0.88667 0.87285 0.88325 0.85753 0.94025 0.85786 0.92087 0.90993 0.87417 0.85375 0.91842 0.83073 0.81190 0.81431 0.84067 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.07 -0.65 10.09 71.24 0.72 0.07 16 2 C 0.05 0.64 5.55 41.02 0.23 0.87 16 3 C -0.21 -3.06 9.27 22.16 0.21 -2.86 16 4 C -0.17 -2.13 5.39 -19.98 -0.11 -2.24 16 5 C -0.05 -0.36 2.59 71.23 0.18 -0.18 16 6 O -0.56 -5.86 12.86 -148.98 -1.92 -7.77 16 7 Si 0.77 4.65 30.84 68.60 2.12 6.77 16 8 C 0.04 0.42 6.86 41.02 0.28 0.71 16 9 C -0.07 -0.42 9.88 71.24 0.70 0.28 16 10 N -0.40 -4.39 1.66 -319.53 -0.53 -4.92 16 11 C 0.14 0.88 4.49 38.50 0.17 1.06 16 12 C -0.14 -0.75 5.80 -19.99 -0.12 -0.86 16 13 C 0.57 6.06 7.60 86.71 0.66 6.72 16 14 O -0.55 -10.77 14.52 -3.96 -0.06 -10.82 16 15 N -0.63 -2.23 3.67 -824.31 -3.03 -5.26 16 16 C 0.09 -0.59 6.29 82.27 0.52 -0.07 16 17 C -0.12 0.84 8.25 30.83 0.25 1.10 16 18 C 0.13 0.09 1.43 -0.47 0.00 0.09 16 19 C -0.12 -0.52 7.23 30.93 0.22 -0.30 16 20 C -0.15 -0.93 4.11 -10.18 -0.04 -0.97 16 21 C 0.07 0.27 7.33 71.98 0.53 0.80 16 22 F -0.23 -2.35 17.30 44.97 0.78 -1.57 16 23 C -0.11 -0.07 7.47 30.93 0.23 0.16 16 24 C -0.08 0.20 8.73 22.52 0.20 0.40 16 25 C -0.10 0.71 10.02 22.24 0.22 0.93 16 26 C -0.08 0.45 10.03 22.30 0.22 0.67 16 27 C -0.12 -0.02 9.96 22.36 0.22 0.21 16 28 H 0.09 0.36 8.14 -2.39 -0.02 0.34 16 29 H 0.07 0.67 8.14 -2.39 -0.02 0.65 16 30 H 0.05 0.53 7.83 -2.39 -0.02 0.51 16 31 H 0.14 1.75 6.55 -2.91 -0.02 1.73 16 32 H 0.09 0.24 7.50 -2.39 -0.02 0.22 16 33 H 0.39 0.47 8.74 -74.06 -0.65 -0.18 16 34 H -0.28 -2.14 7.11 99.48 0.71 -1.43 16 35 H -0.31 -4.81 7.06 99.48 0.70 -4.11 16 36 H 0.05 0.46 8.14 -2.39 -0.02 0.44 16 37 H 0.09 0.27 7.50 -2.39 -0.02 0.25 16 38 H 0.07 0.23 7.83 -2.39 -0.02 0.21 16 39 H 0.10 -0.82 7.62 -2.39 -0.02 -0.83 16 40 H 0.11 -1.10 8.12 -2.39 -0.02 -1.12 16 41 H 0.10 -0.61 8.14 -2.39 -0.02 -0.63 16 42 H 0.12 -1.52 8.14 -2.38 -0.02 -1.54 16 43 H 0.04 0.55 7.98 -2.39 -0.02 0.53 16 44 H 0.12 -0.23 8.04 -2.39 -0.02 -0.25 16 45 H 0.06 0.94 7.60 -2.39 -0.02 0.93 16 46 H 0.07 0.29 8.14 -2.39 -0.02 0.27 16 47 H 0.11 -0.29 8.06 -2.39 -0.02 -0.30 16 48 H 0.13 -0.63 8.10 -2.39 -0.02 -0.64 16 49 H 0.06 0.21 8.14 -2.39 -0.02 0.19 16 50 H 0.15 -1.00 6.18 -2.91 -0.02 -1.02 16 51 H 0.17 -2.26 8.06 -2.91 -0.02 -2.28 16 52 H 0.17 -1.97 8.06 -2.91 -0.02 -1.99 16 53 H 0.14 -0.17 8.06 -2.91 -0.02 -0.19 16 Total: 0.00 -30.45 432.21 3.18 -27.27 By element: Atomic # 1 Polarization: -10.56 SS G_CDS: 0.31 Total: -10.25 kcal Atomic # 6 Polarization: 1.06 SS G_CDS: 5.51 Total: 6.57 kcal Atomic # 7 Polarization: -6.63 SS G_CDS: -3.56 Total: -10.19 kcal Atomic # 8 Polarization: -16.62 SS G_CDS: -1.97 Total: -18.60 kcal Atomic # 9 Polarization: -2.35 SS G_CDS: 0.78 Total: -1.57 kcal Atomic # 14 Polarization: 4.65 SS G_CDS: 2.12 Total: 6.77 kcal Total: -30.45 3.18 -27.27 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_17321334_12335856.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 71.339 kcal (2) G-P(sol) polarization free energy of solvation -30.448 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 40.891 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 3.182 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.267 kcal (6) G-S(sol) free energy of system = (1) + (5) 44.072 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.57 seconds