Wall clock time and date at job start Thu Mar 4 2021 13:40:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86300 * 109.47241 * 2 1 4 4 C 1.50700 * 109.47341 * 240.00126 * 2 1 3 5 5 C 1.38399 * 119.82968 * 119.71810 * 4 2 1 6 6 C 1.37895 * 120.17115 * 179.76494 * 5 4 2 7 7 C 1.39830 * 119.82543 * 0.51703 * 6 5 4 8 8 C 1.47204 * 120.17127 * 179.76395 * 7 6 5 9 9 C 1.34807 * 119.99785 * 359.97438 * 8 7 6 10 10 C 1.46435 * 120.00012 * 179.97438 * 9 8 7 11 11 O 1.21696 * 119.99709 * 359.97438 * 10 9 8 12 12 N 1.34767 * 120.00213 * 180.02562 * 10 9 8 13 13 C 1.47227 * 136.17939 * 359.62313 * 12 10 9 14 14 C 1.53888 * 88.10308 * 153.66750 * 13 12 10 15 15 C 1.46287 * 136.18245 * 180.02562 * 12 10 9 16 16 C 1.53069 * 120.98463 * 80.54625 * 15 12 10 17 17 C 1.53918 * 86.84226 * 259.66801 * 16 15 12 18 18 C 1.53000 * 113.65869 * 220.52404 * 17 16 15 19 19 F 1.39898 * 109.47637 * 277.70984 * 18 17 16 20 20 C 1.53070 * 120.98326 * 332.51002 * 15 12 10 21 21 C 1.39841 * 119.66356 * 359.74106 * 7 6 5 22 22 C 1.37898 * 119.82105 * 0.02562 * 21 7 6 23 23 H 0.96693 * 114.00306 * 59.99646 * 1 2 3 24 24 H 1.09000 * 109.47349 * 120.00016 * 2 1 3 25 25 H 1.48506 * 110.00048 * 298.68597 * 3 2 1 26 26 H 1.48502 * 109.99996 * 59.99922 * 3 2 1 27 27 H 1.08005 * 119.91432 * 0.02562 * 5 4 2 28 28 H 1.08002 * 120.08517 * 180.23663 * 6 5 4 29 29 H 1.07998 * 120.00105 * 179.97438 * 8 7 6 30 30 H 1.07998 * 120.00279 * 0.02562 * 9 8 7 31 31 H 1.09002 * 113.43509 * 268.45870 * 13 12 10 32 32 H 1.09000 * 113.43175 * 38.78538 * 13 12 10 33 33 H 1.08993 * 114.47052 * 272.02808 * 14 13 12 34 34 H 1.09004 * 114.17889 * 139.08124 * 14 13 12 35 35 H 1.08997 * 113.65599 * 14.16011 * 16 15 12 36 36 H 1.09003 * 113.65264 * 145.18224 * 16 15 12 37 37 H 1.09005 * 113.58533 * 89.72408 * 17 16 15 38 38 H 1.09005 * 109.47170 * 37.71297 * 18 17 16 39 39 H 1.08999 * 109.47036 * 157.70815 * 18 17 16 40 40 H 1.08996 * 113.65898 * 214.82581 * 20 15 12 41 41 H 1.09009 * 113.65104 * 345.75646 * 20 15 12 42 42 H 1.07999 * 120.09298 * 180.02562 * 21 7 6 43 43 H 1.07999 * 119.91164 * 179.97438 * 22 21 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.7220 -0.0327 -2.1421 6 6 3.1895 -0.6772 -3.2679 7 6 2.8539 -2.0158 -3.4927 8 6 3.3445 -2.7098 -4.6947 9 6 4.1191 -2.0544 -5.5823 10 6 4.6076 -2.7449 -6.7777 11 8 4.3148 -3.9104 -6.9695 12 7 5.3824 -2.0899 -7.6648 13 6 5.9333 -0.7307 -7.7939 14 6 7.0781 -1.3293 -8.6302 15 6 6.0429 -2.4125 -8.9296 16 6 5.2642 -2.4133 -10.2474 17 6 5.2028 -3.9453 -10.1116 18 6 5.4147 -4.6877 -11.4326 19 9 4.2105 -4.7277 -12.1435 20 6 6.4743 -3.8457 -9.2502 21 6 2.0501 -2.6923 -2.5697 22 6 1.5944 -2.0353 -1.4462 23 1 -0.3933 0.4417 -0.7649 24 1 1.7923 -0.5138 0.8900 25 1 1.5878 2.4586 -1.2242 26 1 1.5615 2.4679 1.2085 27 1 2.9769 1.0025 -1.9691 28 1 3.8096 -0.1481 -3.9764 29 1 3.0839 -3.7439 -4.8654 30 1 4.3800 -1.0205 -5.4114 31 1 5.2915 -0.0547 -8.3589 32 1 6.2634 -0.3050 -6.8464 33 1 7.9314 -1.6739 -8.0461 34 1 7.3609 -0.7286 -9.4947 35 1 4.2901 -1.9289 -10.1801 36 1 5.8497 -2.0731 -11.1016 37 1 4.3305 -4.2998 -9.5625 38 1 6.1689 -4.1687 -12.0242 39 1 5.7498 -5.7045 -11.2281 40 1 7.3982 -3.9060 -9.8255 41 1 6.4705 -4.5076 -8.3841 42 1 1.7870 -3.7264 -2.7362 43 1 0.9732 -2.5561 -0.7326 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_17321334_12360594.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:40:10 Heat of formation + Delta-G solvation = -2.822245 kcal Electronic energy + Delta-G solvation = -25536.622455 eV Core-core repulsion = 21658.401386 eV Total energy + Delta-G solvation = -3878.221069 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 318.142 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -48.60763 -42.21952 -40.70073 -39.53911 -37.91705 -37.02239 -35.11678 -32.29578 -31.67907 -30.59053 -29.03234 -27.14387 -26.93794 -24.54516 -24.39915 -23.96214 -22.49497 -21.56153 -20.54914 -19.28162 -18.58925 -17.98900 -17.30977 -17.12112 -17.02335 -16.87921 -16.55395 -16.49944 -16.24808 -16.15896 -15.68356 -15.19148 -15.14140 -14.91268 -14.54858 -14.30884 -14.11002 -13.86994 -13.74171 -13.48533 -13.39936 -13.25206 -13.07823 -12.75802 -12.42799 -12.29779 -12.12874 -12.00422 -11.78644 -11.64145 -11.52670 -11.41070 -10.96577 -10.86341 -10.63866 -10.01673 -9.79000 -9.27026 -4.92857 -0.60783 0.35993 0.82660 1.29732 1.59634 1.73095 1.96110 2.16253 2.76517 3.20741 3.36080 3.36906 3.40965 3.43535 3.61534 3.63979 3.67463 3.74258 3.90366 4.02462 4.07134 4.13124 4.13491 4.19746 4.30965 4.33365 4.41950 4.44683 4.54905 4.58208 4.68184 4.68788 4.73987 4.80466 4.80933 4.92535 4.97759 5.00657 5.04932 5.07473 5.16699 5.29716 5.34874 5.41869 5.46174 5.55125 5.86287 6.45014 6.69341 7.06142 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.549 6.549 2 C -0.089 4.089 3 Si 0.772 3.228 4 C -0.108 4.108 5 C -0.120 4.120 6 C -0.094 4.094 7 C -0.081 4.081 8 C -0.021 4.021 9 C -0.203 4.203 10 C 0.561 3.439 11 O -0.590 6.590 12 N -0.630 5.630 13 C 0.097 3.903 14 C -0.122 4.122 15 C 0.125 3.875 16 C -0.119 4.119 17 C -0.149 4.149 18 C 0.068 3.932 19 F -0.240 7.240 20 C -0.124 4.124 21 C -0.103 4.103 22 C -0.106 4.106 23 H 0.386 0.614 24 H 0.125 0.875 25 H -0.279 1.279 26 H -0.306 1.306 27 H 0.152 0.848 28 H 0.155 0.845 29 H 0.119 0.881 30 H 0.159 0.841 31 H 0.101 0.899 32 H 0.102 0.898 33 H 0.104 0.896 34 H 0.121 0.879 35 H 0.060 0.940 36 H 0.131 0.869 37 H 0.062 0.938 38 H 0.108 0.892 39 H 0.081 0.919 40 H 0.127 0.873 41 H 0.051 0.949 42 H 0.134 0.866 43 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.622 6.884 -0.710 10.296 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.357 6.357 2 C -0.197 4.197 3 Si 0.677 3.323 4 C -0.108 4.108 5 C -0.137 4.137 6 C -0.112 4.112 7 C -0.081 4.081 8 C -0.041 4.041 9 C -0.224 4.224 10 C 0.355 3.645 11 O -0.473 6.473 12 N -0.363 5.363 13 C -0.024 4.024 14 C -0.159 4.159 15 C 0.039 3.961 16 C -0.157 4.157 17 C -0.168 4.168 18 C 0.013 3.987 19 F -0.222 7.222 20 C -0.162 4.162 21 C -0.121 4.121 22 C -0.124 4.124 23 H 0.235 0.765 24 H 0.143 0.857 25 H -0.205 1.205 26 H -0.235 1.235 27 H 0.169 0.831 28 H 0.173 0.827 29 H 0.137 0.863 30 H 0.177 0.823 31 H 0.119 0.881 32 H 0.120 0.880 33 H 0.122 0.878 34 H 0.139 0.861 35 H 0.079 0.921 36 H 0.149 0.851 37 H 0.081 0.919 38 H 0.126 0.874 39 H 0.099 0.901 40 H 0.146 0.854 41 H 0.070 0.930 42 H 0.152 0.848 43 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges 7.193 6.691 -0.121 9.825 hybrid contribution -1.907 -0.880 -0.304 2.122 sum 5.286 5.811 -0.425 7.867 Atomic orbital electron populations 1.86577 1.18548 1.80413 1.50195 1.25345 0.83461 1.12230 0.98674 0.94060 0.90177 0.71586 0.76442 1.20562 0.98409 0.94918 0.96951 1.21184 0.97903 1.00602 0.94018 1.21623 0.98784 0.93125 0.97624 1.19086 0.99664 0.94695 0.94686 1.22351 0.91754 0.99046 0.90899 1.22902 1.02943 1.02094 0.94417 1.18397 0.76525 0.85676 0.83856 1.90800 1.59202 1.18834 1.78445 1.49618 1.49349 1.15969 1.21347 1.23355 0.93417 0.83579 1.02061 1.23308 0.95409 0.95397 1.01799 1.22580 0.91978 0.96620 0.84897 1.23251 1.00917 0.94265 0.97274 1.23062 0.99791 0.97517 0.96412 1.22249 0.82623 1.02832 0.90961 1.92726 1.50617 1.98100 1.80746 1.23045 0.97894 0.95989 0.99228 1.21600 0.96314 1.00549 0.93641 1.21078 0.99444 0.94363 0.97558 0.76454 0.85732 1.20494 1.23482 0.83116 0.82742 0.86267 0.82328 0.88079 0.87953 0.87778 0.86083 0.92122 0.85135 0.91946 0.87368 0.90114 0.85446 0.92976 0.84763 0.85210 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -1.13 12.76 -148.98 -1.90 -3.03 16 2 C -0.09 0.14 2.82 71.24 0.20 0.34 16 3 Si 0.77 -2.80 29.77 68.60 2.04 -0.76 16 4 C -0.11 0.11 5.40 -19.79 -0.11 0.00 16 5 C -0.12 0.42 8.65 22.23 0.19 0.61 16 6 C -0.09 0.28 9.41 22.57 0.21 0.49 16 7 C -0.08 -0.07 5.87 -20.15 -0.12 -0.19 16 8 C -0.02 -0.06 9.46 23.84 0.23 0.16 16 9 C -0.20 -0.32 9.25 23.62 0.22 -0.10 16 10 C 0.56 4.29 7.98 86.38 0.69 4.98 16 11 O -0.59 -9.84 16.00 -4.34 -0.07 -9.91 16 12 N -0.63 -0.76 3.69 -825.54 -3.05 -3.81 16 13 C 0.10 -0.79 8.34 82.36 0.69 -0.11 16 14 C -0.12 1.15 8.24 30.82 0.25 1.40 16 15 C 0.12 -0.24 1.43 -0.56 0.00 -0.24 16 16 C -0.12 0.20 7.51 30.93 0.23 0.43 16 17 C -0.15 -0.50 4.09 -10.18 -0.04 -0.54 16 18 C 0.07 0.06 7.35 71.98 0.53 0.59 16 19 F -0.24 -2.14 17.36 44.97 0.78 -1.36 16 20 C -0.12 -0.02 7.19 30.93 0.22 0.20 16 21 C -0.10 -0.14 9.80 22.58 0.22 0.08 16 22 C -0.11 -0.10 9.59 22.23 0.21 0.11 16 23 H 0.39 -1.35 8.70 -74.06 -0.64 -1.99 16 24 H 0.12 -0.35 7.96 -2.39 -0.02 -0.37 16 25 H -0.28 0.13 7.11 99.48 0.71 0.83 16 26 H -0.31 -1.47 7.11 99.48 0.71 -0.76 16 27 H 0.15 -1.23 4.85 -2.91 -0.01 -1.24 16 28 H 0.16 -1.30 6.17 -2.91 -0.02 -1.32 16 29 H 0.12 0.75 7.52 -2.91 -0.02 0.73 16 30 H 0.16 -0.89 5.99 -2.91 -0.02 -0.91 16 31 H 0.10 -1.05 8.14 -2.39 -0.02 -1.07 16 32 H 0.10 -1.21 8.14 -2.39 -0.02 -1.23 16 33 H 0.10 -1.01 8.14 -2.39 -0.02 -1.02 16 34 H 0.12 -1.71 8.14 -2.38 -0.02 -1.73 16 35 H 0.06 0.10 8.14 -2.39 -0.02 0.08 16 36 H 0.13 -1.00 7.97 -2.39 -0.02 -1.02 16 37 H 0.06 0.77 7.73 -2.38 -0.02 0.75 16 38 H 0.11 -0.61 7.95 -2.38 -0.02 -0.63 16 39 H 0.08 -0.05 8.14 -2.39 -0.02 -0.06 16 40 H 0.13 -0.80 8.10 -2.39 -0.02 -0.81 16 41 H 0.05 0.35 7.86 -2.38 -0.02 0.34 16 42 H 0.13 -0.05 8.06 -2.91 -0.02 -0.07 16 43 H 0.13 0.05 8.06 -2.91 -0.02 0.03 16 Total: 0.00 -24.18 361.94 2.06 -22.13 By element: Atomic # 1 Polarization: -11.91 SS G_CDS: 0.42 Total: -11.49 kcal Atomic # 6 Polarization: 4.39 SS G_CDS: 3.83 Total: 8.22 kcal Atomic # 7 Polarization: -0.76 SS G_CDS: -3.05 Total: -3.81 kcal Atomic # 8 Polarization: -10.97 SS G_CDS: -1.97 Total: -12.94 kcal Atomic # 9 Polarization: -2.14 SS G_CDS: 0.78 Total: -1.36 kcal Atomic # 14 Polarization: -2.80 SS G_CDS: 2.04 Total: -0.76 kcal Total: -24.18 2.06 -22.13 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_17321334_12360594.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 19.303 kcal (2) G-P(sol) polarization free energy of solvation -24.183 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -4.880 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.058 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.125 kcal (6) G-S(sol) free energy of system = (1) + (5) -2.822 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds