Wall clock time and date at job start Thu Mar 4 2021 13:40:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42906 * 1 3 3 C 1.35646 * 116.99820 * 2 1 4 4 C 1.40139 * 120.14632 * 180.02562 * 3 2 1 5 5 C 1.47537 * 120.19370 * 359.97438 * 4 3 2 6 6 O 1.21581 * 119.99755 * 24.38764 * 5 4 3 7 7 N 1.34770 * 119.99948 * 204.39181 * 5 4 3 8 8 C 1.47223 * 136.18405 * 5.06469 * 7 5 4 9 9 C 1.53882 * 88.10950 * 153.66426 * 8 7 5 10 10 C 1.46293 * 136.17896 * 185.44067 * 7 5 4 11 11 C 1.53072 * 120.98454 * 80.55007 * 10 7 5 12 12 C 1.53916 * 86.84306 * 259.67084 * 11 10 7 13 13 C 1.53002 * 113.65472 * 220.52928 * 12 11 10 14 14 F 1.39907 * 109.46827 * 162.70917 * 13 12 11 15 15 C 1.53067 * 120.98250 * 332.51400 * 10 7 5 16 16 C 1.39709 * 119.61686 * 180.02562 * 4 3 2 17 17 C 1.37786 * 119.90760 * 359.97438 * 16 4 3 18 18 C 1.50708 * 119.85225 * 179.97438 * 17 16 4 19 19 O 1.42901 * 109.46922 * 300.00267 * 18 17 16 20 20 Si 1.86295 * 109.47166 * 180.02562 * 18 17 16 21 21 C 1.38547 * 120.30414 * 0.25812 * 17 16 4 22 22 C 1.38058 * 120.38314 * 359.48885 * 21 17 16 23 23 H 1.09000 * 109.47091 * 59.99822 * 1 2 3 24 24 H 1.08996 * 109.47221 * 179.97438 * 1 2 3 25 25 H 1.09003 * 109.46721 * 300.00263 * 1 2 3 26 26 H 1.08998 * 113.43444 * 268.45865 * 8 7 5 27 27 H 1.09000 * 113.43185 * 38.78038 * 8 7 5 28 28 H 1.08996 * 114.46995 * 272.03023 * 9 8 7 29 29 H 1.09000 * 114.18786 * 139.07537 * 9 8 7 30 30 H 1.08995 * 113.65230 * 14.15695 * 11 10 7 31 31 H 1.08995 * 113.65325 * 145.18005 * 11 10 7 32 32 H 1.08996 * 113.59192 * 89.72315 * 12 11 10 33 33 H 1.09001 * 109.46885 * 282.70114 * 13 12 11 34 34 H 1.08991 * 109.47532 * 42.70913 * 13 12 11 35 35 H 1.09005 * 113.65380 * 214.81990 * 15 10 7 36 36 H 1.08999 * 113.65461 * 345.84567 * 15 10 7 37 37 H 1.08001 * 120.04830 * 179.97438 * 16 4 3 38 38 H 1.08999 * 109.46740 * 59.99852 * 18 17 16 39 39 H 0.96693 * 113.99741 * 299.99860 * 19 18 17 40 40 H 1.48506 * 109.99610 * 180.02562 * 20 18 17 41 41 H 1.48498 * 110.00294 * 301.31650 * 20 18 17 42 42 H 1.07999 * 119.81191 * 179.74043 * 21 17 16 43 43 H 1.08003 * 119.95449 * 180.23544 * 22 21 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0448 1.2086 0.0000 4 6 3.4441 1.2856 -0.0005 5 6 4.2550 0.0531 -0.0005 6 8 3.7878 -0.9820 -0.4349 7 7 5.5136 0.0745 0.4810 8 6 6.3777 1.0597 1.1520 9 6 7.1354 -0.1167 1.7921 10 6 6.6287 -0.8689 0.5626 11 6 7.5423 -1.1151 -0.6406 12 6 6.7282 -2.3975 -0.8886 13 6 7.5829 -3.5965 -1.3044 14 9 6.8507 -4.7753 -1.1261 15 6 6.3815 -2.3787 0.6109 16 6 4.0668 2.5362 0.0000 17 6 3.3038 3.6836 0.0005 18 6 3.9769 5.0320 0.0017 19 8 4.7920 5.1565 1.1689 20 14 2.6827 6.3720 0.0030 21 6 1.9207 3.6034 0.0059 22 6 1.2925 2.3740 0.0002 23 1 -0.3633 0.5139 -0.8900 24 1 -0.3633 -1.0276 -0.0005 25 1 -0.3633 0.5139 0.8900 26 1 6.9867 1.6434 0.4617 27 1 5.8476 1.6803 1.8744 28 1 6.7148 -0.4649 2.7354 29 1 8.2172 0.0131 1.8236 30 1 7.4365 -0.3706 -1.4296 31 1 8.5814 -1.3022 -0.3697 32 1 5.8654 -2.2479 -1.5376 33 1 7.8620 -3.4974 -2.3534 34 1 8.4829 -3.6315 -0.6906 35 1 7.0961 -2.9192 1.2318 36 1 5.3465 -2.6458 0.8238 37 1 5.1447 2.6037 0.0000 38 1 4.5992 5.1282 -0.8880 39 1 4.3032 5.0808 1.9997 40 1 3.3337 7.7068 0.0035 41 1 1.8080 6.2346 -1.1892 42 1 1.3304 4.5078 0.0105 43 1 0.2139 2.3195 0.0006 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_17321334_12496546.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:40:18 Heat of formation + Delta-G solvation = -49.249480 kcal Electronic energy + Delta-G solvation = -28144.997716 eV Core-core repulsion = 24074.307360 eV Total energy + Delta-G solvation = -4070.690357 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 322.141 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -48.59916 -42.38972 -41.37357 -39.25966 -39.11550 -37.16160 -36.97472 -33.00368 -31.89401 -30.59978 -29.11391 -28.56350 -26.87819 -26.18904 -25.33356 -24.59626 -23.05717 -22.06545 -21.34155 -19.59549 -18.86426 -18.30599 -18.01110 -17.31808 -17.14001 -17.06691 -16.86915 -16.74377 -16.41010 -16.29921 -16.08383 -15.88717 -15.44233 -15.10572 -15.03632 -14.60007 -14.53298 -14.25056 -13.76563 -13.64587 -13.48910 -13.41622 -13.40573 -13.04812 -12.65592 -12.53023 -12.41982 -12.12644 -12.09694 -12.08187 -11.80120 -11.78083 -11.52888 -10.93250 -10.85205 -10.39690 -10.24267 -9.75383 -9.32361 -4.98720 -0.28457 0.16684 1.32386 1.63506 1.66141 1.71245 1.99591 2.20331 2.56941 3.17046 3.34482 3.39333 3.43427 3.50255 3.60676 3.61594 3.67344 3.75913 3.88316 4.07112 4.08611 4.11194 4.18302 4.23614 4.29719 4.30575 4.36350 4.39270 4.54181 4.57662 4.61397 4.64001 4.65894 4.71421 4.75384 4.85990 4.93665 4.95872 4.99992 5.01588 5.11566 5.23014 5.29323 5.38855 5.52990 6.25952 6.66757 6.81586 7.08835 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.013 3.987 2 O -0.322 6.322 3 C 0.167 3.833 4 C -0.193 4.193 5 C 0.579 3.421 6 O -0.567 6.567 7 N -0.631 5.631 8 C 0.096 3.904 9 C -0.121 4.121 10 C 0.127 3.873 11 C -0.105 4.105 12 C -0.148 4.148 13 C 0.068 3.932 14 F -0.241 7.241 15 C -0.132 4.132 16 C -0.019 4.019 17 C -0.166 4.166 18 C -0.063 4.063 19 O -0.550 6.550 20 Si 0.774 3.226 21 C -0.044 4.044 22 C -0.210 4.210 23 H 0.071 0.929 24 H 0.106 0.894 25 H 0.078 0.922 26 H 0.106 0.894 27 H 0.092 0.908 28 H 0.097 0.903 29 H 0.127 0.873 30 H 0.073 0.927 31 H 0.139 0.861 32 H 0.061 0.939 33 H 0.085 0.915 34 H 0.108 0.892 35 H 0.117 0.883 36 H 0.039 0.961 37 H 0.148 0.852 38 H 0.109 0.891 39 H 0.396 0.604 40 H -0.299 1.299 41 H -0.286 1.286 42 H 0.159 0.841 43 H 0.164 0.836 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.788 6.703 4.709 8.385 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.081 4.081 2 O -0.234 6.234 3 C 0.119 3.881 4 C -0.197 4.197 5 C 0.371 3.629 6 O -0.446 6.446 7 N -0.365 5.365 8 C -0.026 4.026 9 C -0.158 4.158 10 C 0.042 3.958 11 C -0.144 4.144 12 C -0.167 4.167 13 C 0.013 3.987 14 F -0.223 7.223 15 C -0.170 4.170 16 C -0.038 4.038 17 C -0.167 4.167 18 C -0.173 4.173 19 O -0.358 6.358 20 Si 0.680 3.320 21 C -0.061 4.061 22 C -0.229 4.229 23 H 0.089 0.911 24 H 0.124 0.876 25 H 0.097 0.903 26 H 0.124 0.876 27 H 0.110 0.890 28 H 0.115 0.885 29 H 0.145 0.855 30 H 0.092 0.908 31 H 0.157 0.843 32 H 0.079 0.921 33 H 0.104 0.896 34 H 0.126 0.874 35 H 0.135 0.865 36 H 0.058 0.942 37 H 0.165 0.835 38 H 0.127 0.873 39 H 0.246 0.754 40 H -0.227 1.227 41 H -0.213 1.213 42 H 0.176 0.824 43 H 0.181 0.819 Dipole moment (debyes) X Y Z Total from point charges 1.482 6.673 3.548 7.701 hybrid contribution -0.505 -0.749 -0.855 1.243 sum 0.978 5.924 2.693 6.581 Atomic orbital electron populations 1.23442 0.76236 1.05453 1.02976 1.86276 1.23541 1.26748 1.86844 1.19388 0.91168 0.85587 0.91996 1.19370 0.91062 0.93990 1.15229 1.17969 0.80508 0.87949 0.76449 1.90794 1.71522 1.34059 1.48261 1.49558 1.09644 1.18412 1.58935 1.23384 0.90310 0.93395 0.95462 1.23299 1.02956 0.93870 0.95688 1.22600 0.85705 0.90842 0.96689 1.23133 0.99774 0.95027 0.96435 1.23051 0.99351 0.96712 0.97604 1.22237 0.93746 0.78715 1.03963 1.92728 1.80859 1.51466 1.97224 1.23086 1.01622 0.96181 0.96144 1.21199 1.00884 0.89043 0.92652 1.20306 0.93815 0.96032 1.06500 1.25045 1.02052 0.98762 0.91445 1.86464 1.37943 1.95278 1.16160 0.93832 0.77723 0.74001 0.86430 1.21289 0.93707 0.97835 0.93312 1.21471 1.01757 0.90834 1.08803 0.91073 0.87561 0.90305 0.87563 0.88971 0.88455 0.85506 0.90846 0.84281 0.92057 0.89637 0.87425 0.86509 0.94163 0.83474 0.87317 0.75394 1.22695 1.21319 0.82356 0.81894 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 0.01 9.81 113.37 1.11 1.12 16 2 O -0.32 -3.53 8.86 -70.24 -0.62 -4.15 16 3 C 0.17 1.26 6.67 22.84 0.15 1.42 16 4 C -0.19 -1.58 5.85 -20.01 -0.12 -1.70 16 5 C 0.58 7.48 7.78 86.70 0.67 8.15 16 6 O -0.57 -12.49 15.37 15.40 0.24 -12.25 16 7 N -0.63 -3.14 3.64 -824.33 -3.00 -6.15 16 8 C 0.10 -0.42 6.12 82.36 0.50 0.08 16 9 C -0.12 0.76 8.24 30.82 0.25 1.01 16 10 C 0.13 0.10 1.44 -0.57 0.00 0.10 16 11 C -0.11 0.26 7.52 30.93 0.23 0.49 16 12 C -0.15 -0.72 4.11 -10.18 -0.04 -0.77 16 13 C 0.07 0.13 7.33 71.98 0.53 0.65 16 14 F -0.24 -2.64 17.30 44.97 0.78 -1.86 16 15 C -0.13 -0.69 7.11 30.93 0.22 -0.47 16 16 C -0.02 -0.03 8.42 22.52 0.19 0.16 16 17 C -0.17 0.28 5.39 -19.90 -0.11 0.18 16 18 C -0.06 0.25 2.81 71.24 0.20 0.45 16 19 O -0.55 2.51 12.76 -148.98 -1.90 0.61 16 20 Si 0.77 -4.02 29.77 68.60 2.04 -1.98 16 21 C -0.04 0.13 8.66 22.30 0.19 0.33 16 22 C -0.21 0.00 9.03 22.34 0.20 0.20 16 23 H 0.07 -0.19 7.66 -2.39 -0.02 -0.21 16 24 H 0.11 -0.08 8.14 -2.39 -0.02 -0.09 16 25 H 0.08 -0.33 7.66 -2.39 -0.02 -0.35 16 26 H 0.11 -0.84 7.90 -2.39 -0.02 -0.86 16 27 H 0.09 -0.53 7.79 -2.39 -0.02 -0.54 16 28 H 0.10 -0.52 8.14 -2.39 -0.02 -0.54 16 29 H 0.13 -1.55 8.14 -2.39 -0.02 -1.57 16 30 H 0.07 -0.09 8.14 -2.39 -0.02 -0.10 16 31 H 0.14 -1.33 8.04 -2.39 -0.02 -1.35 16 32 H 0.06 0.82 7.94 -2.39 -0.02 0.80 16 33 H 0.09 -0.07 8.14 -2.39 -0.02 -0.09 16 34 H 0.11 -0.50 8.06 -2.39 -0.02 -0.52 16 35 H 0.12 0.02 8.10 -2.38 -0.02 0.00 16 36 H 0.04 0.56 7.71 -2.39 -0.02 0.54 16 37 H 0.15 -0.15 5.66 -2.91 -0.02 -0.17 16 38 H 0.11 -0.31 7.96 -2.39 -0.02 -0.32 16 39 H 0.40 -4.85 8.70 -74.06 -0.64 -5.50 16 40 H -0.30 -0.80 7.11 99.48 0.71 -0.09 16 41 H -0.29 0.09 7.11 99.48 0.71 0.80 16 42 H 0.16 -1.37 4.85 -2.91 -0.01 -1.38 16 43 H 0.16 -0.88 6.30 -2.91 -0.02 -0.90 16 Total: 0.00 -28.98 353.24 2.16 -26.82 By element: Atomic # 1 Polarization: -12.87 SS G_CDS: 0.44 Total: -12.43 kcal Atomic # 6 Polarization: 7.20 SS G_CDS: 4.20 Total: 11.40 kcal Atomic # 7 Polarization: -3.14 SS G_CDS: -3.00 Total: -6.15 kcal Atomic # 8 Polarization: -13.51 SS G_CDS: -2.29 Total: -15.79 kcal Atomic # 9 Polarization: -2.64 SS G_CDS: 0.78 Total: -1.86 kcal Atomic # 14 Polarization: -4.02 SS G_CDS: 2.04 Total: -1.98 kcal Total: -28.98 2.16 -26.82 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_17321334_12496546.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -22.433 kcal (2) G-P(sol) polarization free energy of solvation -28.978 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -51.411 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.161 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.816 kcal (6) G-S(sol) free energy of system = (1) + (5) -49.249 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds