Wall clock time and date at job start Thu Mar 4 2021 13:43:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42907 * 1 3 3 C 1.35994 * 117.00165 * 2 1 4 4 C 1.39155 * 120.07385 * 180.02562 * 3 2 1 5 5 O 1.35995 * 120.07070 * 359.73996 * 4 3 2 6 6 C 1.42895 * 117.00064 * 179.97438 * 5 4 3 7 7 C 1.50700 * 109.47460 * 180.02562 * 6 5 4 8 8 O 1.21279 * 119.99698 * 0.02562 * 7 6 5 9 9 N 1.34775 * 119.99994 * 180.02562 * 7 6 5 10 10 C 1.47219 * 136.18474 * 359.63588 * 9 7 6 11 11 C 1.53882 * 88.10799 * 153.65799 * 10 9 7 12 12 C 1.46288 * 136.17971 * 179.97438 * 9 7 6 13 13 C 1.53072 * 120.98148 * 80.55593 * 12 9 7 14 14 C 1.53920 * 86.84764 * 259.67391 * 13 12 9 15 15 C 1.53000 * 113.65657 * 220.52984 * 14 13 12 16 16 F 1.39899 * 109.47190 * 277.69836 * 15 14 13 17 17 C 1.53073 * 120.98252 * 332.52737 * 12 9 7 18 18 C 1.38558 * 119.85524 * 179.72156 * 4 3 2 19 19 C 1.38247 * 119.99917 * 359.97438 * 18 4 3 20 20 C 1.38245 * 120.14478 * 359.97438 * 19 18 4 21 21 C 1.50705 * 119.92641 * 180.02562 * 20 19 18 22 22 O 1.42902 * 109.46942 * 244.99936 * 21 20 19 23 23 Si 1.86307 * 109.46906 * 4.99521 * 21 20 19 24 24 C 1.38238 * 120.15318 * 0.04167 * 20 19 18 25 25 H 1.08998 * 109.46932 * 300.00387 * 1 2 3 26 26 H 1.09002 * 109.46940 * 59.99906 * 1 2 3 27 27 H 1.08991 * 109.47071 * 180.02562 * 1 2 3 28 28 H 1.08999 * 109.47268 * 300.00538 * 6 5 4 29 29 H 1.09005 * 109.46932 * 60.00506 * 6 5 4 30 30 H 1.09001 * 113.42772 * 268.45397 * 10 9 7 31 31 H 1.09003 * 113.42902 * 38.77133 * 10 9 7 32 32 H 1.08991 * 114.46997 * 272.02432 * 11 10 9 33 33 H 1.09000 * 114.18197 * 139.07530 * 11 10 9 34 34 H 1.09007 * 113.65177 * 14.15713 * 13 12 9 35 35 H 1.08997 * 113.65468 * 145.18058 * 13 12 9 36 36 H 1.09000 * 113.59099 * 89.72202 * 14 13 12 37 37 H 1.08996 * 109.47322 * 37.70407 * 15 14 13 38 38 H 1.09008 * 109.47196 * 157.70005 * 15 14 13 39 39 H 1.08997 * 113.65148 * 214.81137 * 17 12 9 40 40 H 1.09001 * 113.65649 * 345.75171 * 17 12 9 41 41 H 1.07996 * 120.00036 * 180.02562 * 18 4 3 42 42 H 1.08002 * 119.92731 * 179.97438 * 19 18 4 43 43 H 1.08997 * 109.47245 * 124.99365 * 21 20 19 44 44 H 0.96698 * 114.00063 * 59.99426 * 22 21 20 45 45 H 1.48490 * 109.99878 * 58.68379 * 23 21 20 46 46 H 1.48497 * 109.99580 * 180.02562 * 23 21 20 47 47 H 1.07998 * 120.00548 * 179.97438 * 24 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0465 1.2117 0.0000 4 6 3.4360 1.2863 -0.0005 5 8 4.1796 0.1476 0.0043 6 6 5.6003 0.3005 0.0028 7 6 6.2519 -1.0584 0.0081 8 8 5.5669 -2.0592 0.0121 9 7 7.5957 -1.1614 0.0082 10 6 8.7328 -0.2264 -0.0021 11 6 9.5694 -1.3161 0.6910 12 6 8.5707 -2.2520 0.0128 13 6 8.9350 -2.9886 -1.2786 14 6 7.9778 -4.1008 -0.8140 15 6 8.5020 -5.5131 -1.0811 16 9 8.2305 -5.8683 -2.4068 17 6 8.2280 -3.6128 0.6243 18 6 4.0604 2.5232 -0.0064 19 6 3.3031 3.6798 -0.0122 20 6 1.9226 3.6056 -0.0127 21 6 1.1018 4.8695 -0.0196 22 8 0.3640 4.9651 1.2005 23 14 2.2313 6.3426 -0.1793 24 6 1.2933 2.3748 -0.0066 25 1 -0.3633 0.5139 0.8899 26 1 -0.3633 0.5139 -0.8900 27 1 -0.3633 -1.0276 0.0005 28 1 5.9061 0.8462 -0.8898 29 1 5.9070 0.8543 0.8902 30 1 9.0840 0.0178 -1.0047 31 1 8.5726 0.6576 0.6152 32 1 9.5083 -1.3084 1.7792 33 1 10.5895 -1.4017 0.3165 34 1 8.6044 -2.4765 -2.1823 35 1 9.9784 -3.3006 -1.3246 36 1 6.9503 -3.9604 -1.1497 37 1 9.5782 -5.5395 -0.9109 38 1 8.0105 -6.2164 -0.4086 39 1 9.0737 -4.0993 1.1102 40 1 7.3322 -3.6001 1.2452 41 1 5.1387 2.5838 -0.0072 42 1 3.7909 4.6433 -0.0163 43 1 0.4102 4.8491 -0.8619 44 1 0.9168 4.9880 1.9936 45 1 3.0273 6.2391 -1.4285 46 1 1.4340 7.5953 -0.1867 47 1 0.2147 2.3197 -0.0066 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_17321334_60476.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:43:20 Heat of formation + Delta-G solvation = -84.547807 kcal Electronic energy + Delta-G solvation = -31286.050490 eV Core-core repulsion = 26739.609672 eV Total energy + Delta-G solvation = -4546.440818 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.156 amu Computer time = 1.12 seconds Orbital eigenvalues (eV) -48.61665 -42.31108 -41.75218 -40.10072 -39.08137 -38.76045 -37.06155 -36.93773 -32.26802 -31.66135 -31.29033 -29.05369 -28.98241 -28.43559 -26.95483 -26.21665 -24.46309 -23.84921 -22.83552 -22.31746 -21.40902 -19.94263 -18.96729 -18.56078 -18.20798 -17.85199 -17.65655 -17.25401 -17.20774 -16.99470 -16.72358 -16.71149 -16.31747 -16.11964 -16.07182 -15.89345 -15.67680 -15.25497 -14.98978 -14.74652 -14.36120 -14.26746 -13.94150 -13.70400 -13.58490 -13.51969 -13.46173 -13.35222 -12.78502 -12.66482 -12.58398 -12.40284 -12.24861 -12.15246 -12.02661 -12.01345 -11.79635 -11.77725 -11.53546 -10.93313 -10.85735 -10.44883 -9.84214 -9.79993 -8.96904 -4.97951 0.11878 0.23387 1.19810 1.32325 1.39669 1.67225 1.99453 2.26061 2.32875 2.51645 3.16723 3.34331 3.37658 3.39776 3.47179 3.60894 3.64950 3.66787 3.80210 3.81257 3.96948 4.00918 4.05230 4.08941 4.11801 4.18055 4.23019 4.25538 4.30015 4.31232 4.45127 4.47511 4.56893 4.59152 4.60842 4.67897 4.69259 4.74548 4.82577 4.95864 4.98927 5.02134 5.06890 5.07977 5.30864 5.32796 5.36388 5.55718 5.92801 6.45240 6.60221 6.76815 6.96960 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.021 3.979 2 O -0.337 6.337 3 C 0.076 3.924 4 C 0.082 3.918 5 O -0.316 6.316 6 C 0.046 3.954 7 C 0.532 3.468 8 O -0.571 6.571 9 N -0.632 5.632 10 C 0.095 3.905 11 C -0.120 4.120 12 C 0.129 3.871 13 C -0.118 4.118 14 C -0.152 4.152 15 C 0.068 3.932 16 F -0.241 7.241 17 C -0.125 4.125 18 C -0.159 4.159 19 C -0.106 4.106 20 C -0.118 4.118 21 C -0.077 4.077 22 O -0.557 6.557 23 Si 0.789 3.211 24 C -0.152 4.152 25 H 0.066 0.934 26 H 0.063 0.937 27 H 0.110 0.890 28 H 0.119 0.881 29 H 0.126 0.874 30 H 0.106 0.894 31 H 0.109 0.891 32 H 0.105 0.895 33 H 0.123 0.877 34 H 0.062 0.938 35 H 0.133 0.867 36 H 0.059 0.941 37 H 0.110 0.890 38 H 0.079 0.921 39 H 0.129 0.871 40 H 0.049 0.951 41 H 0.174 0.826 42 H 0.163 0.837 43 H 0.103 0.897 44 H 0.396 0.604 45 H -0.280 1.280 46 H -0.302 1.302 47 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 10.087 6.556 4.084 12.705 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 O -0.251 6.251 3 C 0.031 3.969 4 C 0.037 3.963 5 O -0.230 6.230 6 C -0.031 4.031 7 C 0.322 3.678 8 O -0.449 6.449 9 N -0.368 5.368 10 C -0.025 4.025 11 C -0.157 4.157 12 C 0.043 3.957 13 C -0.156 4.156 14 C -0.171 4.171 15 C 0.013 3.987 16 F -0.222 7.222 17 C -0.163 4.163 18 C -0.177 4.177 19 C -0.124 4.124 20 C -0.119 4.119 21 C -0.186 4.186 22 O -0.365 6.365 23 Si 0.694 3.306 24 C -0.171 4.171 25 H 0.084 0.916 26 H 0.081 0.919 27 H 0.129 0.871 28 H 0.137 0.863 29 H 0.144 0.856 30 H 0.124 0.876 31 H 0.127 0.873 32 H 0.124 0.876 33 H 0.141 0.859 34 H 0.080 0.920 35 H 0.151 0.849 36 H 0.077 0.923 37 H 0.128 0.872 38 H 0.097 0.903 39 H 0.147 0.853 40 H 0.068 0.932 41 H 0.192 0.808 42 H 0.180 0.820 43 H 0.121 0.879 44 H 0.246 0.754 45 H -0.207 1.207 46 H -0.231 1.231 47 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges 9.183 6.336 3.182 11.602 hybrid contribution -1.596 -0.803 -0.710 1.923 sum 7.587 5.532 2.472 9.710 Atomic orbital electron populations 1.23284 0.76767 1.05190 1.02134 1.86192 1.23060 1.26730 1.89115 1.18684 0.89876 0.85642 1.02740 1.18625 0.88208 0.86524 1.02956 1.86215 1.18109 1.29334 1.89348 1.22603 0.79224 0.94856 1.06445 1.20190 0.80930 0.90850 0.75873 1.90756 1.63028 1.40352 1.50766 1.49628 1.02403 1.12780 1.71976 1.23452 0.81250 0.94927 1.02867 1.23304 0.98563 0.92591 1.01273 1.22605 0.86637 0.89157 0.97281 1.23257 1.01160 0.94951 0.96214 1.23084 0.99630 0.95244 0.99143 1.22252 1.03342 0.95429 0.77643 1.92726 1.95945 1.93451 1.40092 1.23067 1.02682 0.95700 0.94865 1.21370 1.02211 0.89337 1.04795 1.21008 0.92213 0.98914 1.00252 1.20222 0.94540 0.94831 1.02290 1.25294 1.01049 1.02251 0.90030 1.86468 1.37506 1.96586 1.15956 0.93657 0.79158 0.72418 0.85362 1.21024 1.00490 0.90569 1.04996 0.91561 0.91864 0.87145 0.86329 0.85633 0.87635 0.87284 0.87611 0.85871 0.91956 0.84904 0.92278 0.87173 0.90287 0.85252 0.93191 0.80836 0.81995 0.87929 0.75424 1.20666 1.23058 0.84139 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.08 9.81 113.37 1.11 1.19 16 2 O -0.34 -4.35 10.28 -79.62 -0.82 -5.17 16 3 C 0.08 0.73 6.70 22.57 0.15 0.88 16 4 C 0.08 0.59 6.70 22.57 0.15 0.75 16 5 O -0.32 -3.53 9.45 -67.08 -0.63 -4.16 16 6 C 0.05 0.04 5.06 71.24 0.36 0.40 16 7 C 0.53 4.05 8.14 87.66 0.71 4.76 16 8 O -0.57 -11.18 16.28 16.01 0.26 -10.92 16 9 N -0.63 0.28 3.69 -820.75 -3.03 -2.75 16 10 C 0.10 -1.05 8.44 82.35 0.69 -0.35 16 11 C -0.12 1.37 8.24 30.81 0.25 1.62 16 12 C 0.13 -0.39 1.43 -0.59 0.00 -0.39 16 13 C -0.12 0.29 7.51 30.93 0.23 0.52 16 14 C -0.15 -0.55 4.09 -10.17 -0.04 -0.59 16 15 C 0.07 0.08 7.35 71.98 0.53 0.61 16 16 F -0.24 -2.25 17.36 44.97 0.78 -1.47 16 17 C -0.13 0.00 7.19 30.93 0.22 0.22 16 18 C -0.16 0.24 9.04 22.35 0.20 0.44 16 19 C -0.11 0.31 8.66 22.27 0.19 0.50 16 20 C -0.12 -0.09 5.35 -19.86 -0.11 -0.19 16 21 C -0.08 0.06 2.80 71.24 0.20 0.26 16 22 O -0.56 -0.05 12.83 -148.98 -1.91 -1.96 16 23 Si 0.79 -3.21 29.80 68.60 2.04 -1.16 16 24 C -0.15 -0.75 8.67 22.35 0.19 -0.56 16 25 H 0.07 0.09 7.67 -2.39 -0.02 0.07 16 26 H 0.06 0.10 7.65 -2.39 -0.02 0.08 16 27 H 0.11 0.15 8.14 -2.39 -0.02 0.13 16 28 H 0.12 -0.62 7.66 -2.39 -0.02 -0.64 16 29 H 0.13 -0.82 7.66 -2.38 -0.02 -0.83 16 30 H 0.11 -1.42 8.14 -2.39 -0.02 -1.44 16 31 H 0.11 -1.70 8.14 -2.39 -0.02 -1.72 16 32 H 0.11 -1.23 8.14 -2.39 -0.02 -1.25 16 33 H 0.12 -1.97 8.14 -2.39 -0.02 -1.99 16 34 H 0.06 0.04 8.14 -2.38 -0.02 0.02 16 35 H 0.13 -1.14 7.97 -2.39 -0.02 -1.16 16 36 H 0.06 0.79 7.73 -2.39 -0.02 0.77 16 37 H 0.11 -0.63 7.95 -2.39 -0.02 -0.65 16 38 H 0.08 0.01 8.14 -2.38 -0.02 -0.01 16 39 H 0.13 -0.85 8.10 -2.39 -0.02 -0.87 16 40 H 0.05 0.36 7.86 -2.39 -0.02 0.34 16 41 H 0.17 -1.66 6.30 -2.91 -0.02 -1.68 16 42 H 0.16 -1.53 4.89 -2.91 -0.01 -1.54 16 43 H 0.10 0.08 7.96 -2.39 -0.02 0.06 16 44 H 0.40 -3.22 8.70 -74.06 -0.64 -3.86 16 45 H -0.28 0.02 7.11 99.48 0.71 0.72 16 46 H -0.30 -1.20 7.11 99.48 0.71 -0.50 16 47 H 0.14 0.49 6.30 -2.91 -0.02 0.47 16 Total: 0.00 -35.12 390.49 2.15 -32.97 By element: Atomic # 1 Polarization: -15.86 SS G_CDS: 0.40 Total: -15.46 kcal Atomic # 6 Polarization: 5.02 SS G_CDS: 5.06 Total: 10.08 kcal Atomic # 7 Polarization: 0.28 SS G_CDS: -3.03 Total: -2.75 kcal Atomic # 8 Polarization: -19.10 SS G_CDS: -3.10 Total: -22.21 kcal Atomic # 9 Polarization: -2.25 SS G_CDS: 0.78 Total: -1.47 kcal Atomic # 14 Polarization: -3.21 SS G_CDS: 2.04 Total: -1.16 kcal Total: -35.12 2.15 -32.97 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_17321334_60476.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -51.574 kcal (2) G-P(sol) polarization free energy of solvation -35.123 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -86.697 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.149 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.974 kcal (6) G-S(sol) free energy of system = (1) + (5) -84.548 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.12 seconds