Wall clock time and date at job start Thu Mar 4 2021 13:43:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.33817 * 122.44723 * 2 1 4 4 C 1.50696 * 124.52337 * 359.97438 * 3 2 1 5 5 O 1.42896 * 109.47027 * 313.73481 * 4 3 2 6 6 Si 1.86302 * 109.46919 * 193.73642 * 4 3 2 7 7 S 1.70623 * 110.95083 * 179.72469 * 3 2 1 8 8 C 1.75829 * 91.56374 * 0.32556 * 7 3 2 9 9 C 1.46584 * 125.45626 * 179.97438 * 8 7 3 10 10 O 1.21707 * 119.99996 * 179.69073 * 9 8 7 11 11 N 1.34777 * 120.00240 * 359.96620 * 9 8 7 12 12 C 1.47218 * 136.17882 * 359.35693 * 11 9 8 13 13 C 1.53878 * 88.10692 * 153.66092 * 12 11 9 14 14 C 1.46281 * 136.18113 * 179.72576 * 11 9 8 15 15 C 1.53066 * 120.98463 * 80.55292 * 14 11 9 16 16 C 1.53916 * 86.84729 * 259.66760 * 15 14 11 17 17 C 1.52995 * 113.66055 * 220.52694 * 16 15 14 18 18 F 1.39901 * 109.47159 * 162.70382 * 17 16 15 19 19 C 1.53072 * 120.98356 * 332.52105 * 14 11 9 20 20 C 1.36649 * 109.08274 * 359.67632 * 8 7 3 21 21 H 1.08998 * 109.47124 * 275.84744 * 1 2 3 22 22 H 1.08994 * 109.46874 * 35.84927 * 1 2 3 23 23 H 1.09002 * 109.47040 * 155.84245 * 1 2 3 24 24 H 1.08995 * 109.47194 * 73.74236 * 4 3 2 25 25 H 0.96701 * 114.00418 * 299.99609 * 5 4 3 26 26 H 1.48501 * 110.00308 * 58.68074 * 6 4 3 27 27 H 1.48505 * 109.99993 * 179.97438 * 6 4 3 28 28 H 1.09002 * 113.42861 * 268.45082 * 12 11 9 29 29 H 1.09009 * 113.43266 * 38.77593 * 12 11 9 30 30 H 1.09003 * 114.46813 * 272.02576 * 13 12 11 31 31 H 1.08996 * 114.18545 * 139.07610 * 13 12 11 32 32 H 1.09002 * 113.65153 * 14.15844 * 15 14 11 33 33 H 1.09000 * 113.65614 * 145.17732 * 15 14 11 34 34 H 1.09004 * 113.58558 * 89.72152 * 16 15 14 35 35 H 1.09006 * 109.47426 * 282.70206 * 17 16 15 36 36 H 1.09003 * 109.47576 * 42.70426 * 17 16 15 37 37 H 1.09005 * 113.64865 * 214.82104 * 19 14 11 38 38 H 1.08999 * 113.65574 * 345.84102 * 19 14 11 39 39 H 1.08004 * 123.34718 * 180.27375 * 20 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2250 1.1293 0.0000 4 6 1.6355 2.5161 -0.0006 5 8 0.5923 2.5899 -0.9744 6 14 2.9630 3.7550 -0.4174 7 16 3.8970 0.7892 0.0077 8 6 3.5937 -0.9427 0.0009 9 6 4.6232 -1.9862 0.0026 10 8 4.3002 -3.1597 0.0031 11 7 5.9274 -1.6463 0.0091 12 6 6.6981 -0.3920 0.0044 13 6 7.8409 -1.1513 0.7012 14 6 7.2041 -2.3602 0.0176 15 6 7.7940 -2.9353 -1.2724 16 6 7.2490 -4.2994 -0.8130 17 6 8.2054 -5.4637 -1.0786 18 9 7.8283 -6.5637 -0.3008 19 6 7.3204 -3.7597 0.6266 20 6 2.2446 -1.1601 0.0006 21 1 -0.3633 0.1047 1.0223 22 1 -0.3633 0.8330 -0.6018 23 1 -0.3633 -0.9377 -0.4206 24 1 1.2282 2.7382 0.9858 25 1 0.8834 2.4033 -1.8775 26 1 3.5485 3.4442 -1.7463 27 1 2.3942 5.1268 -0.4219 28 1 6.9552 -0.0451 -0.9965 29 1 6.2563 0.3907 0.6212 30 1 7.7758 -1.1658 1.7892 31 1 8.8349 -0.8995 0.3315 32 1 7.3186 -2.5567 -2.1774 33 1 8.8823 -2.8905 -1.3137 34 1 6.2332 -4.5004 -1.1536 35 1 8.1649 -5.7339 -2.1338 36 1 9.2213 -5.1660 -0.8185 37 1 8.2763 -3.9454 1.1163 38 1 6.4660 -4.0412 1.2420 39 1 1.8020 -2.1452 0.0011 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_17321334_6739946.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:43:39 Heat of formation + Delta-G solvation = -14.455880 kcal Electronic energy + Delta-G solvation = -23929.734257 eV Core-core repulsion = 20268.387102 eV Total energy + Delta-G solvation = -3661.347154 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 312.098 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -48.58175 -42.28137 -40.29573 -39.26140 -37.47162 -37.06612 -32.54307 -30.87043 -30.16984 -29.11258 -26.87115 -26.51812 -24.60517 -24.57071 -22.54489 -21.44580 -20.18977 -19.83168 -18.45547 -17.76858 -17.39976 -17.17887 -17.08959 -16.88279 -16.62154 -16.43110 -16.21313 -15.84544 -15.39690 -15.01842 -14.68027 -14.54187 -14.33447 -13.90148 -13.81643 -13.57184 -13.46563 -13.35065 -13.17875 -12.99084 -12.81178 -12.53584 -12.37202 -12.30299 -12.11098 -11.78589 -11.66897 -11.52437 -11.13357 -10.85664 -10.77620 -10.02091 -9.66560 -9.41540 -5.11993 -0.70917 0.27090 0.68568 1.08028 1.25358 1.53950 1.57219 1.87339 2.00280 3.15346 3.23522 3.36680 3.40353 3.44131 3.58029 3.60010 3.68145 4.06270 4.08576 4.12170 4.17503 4.25359 4.28779 4.37740 4.46454 4.52787 4.54293 4.61573 4.67556 4.74493 4.77692 4.79924 4.91593 4.95825 4.98039 5.02186 5.05312 5.28560 5.34813 5.38832 5.40046 6.35156 6.54040 6.90679 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.105 4.105 2 C -0.103 4.103 3 C -0.246 4.246 4 C -0.040 4.040 5 O -0.531 6.531 6 Si 0.731 3.269 7 S 0.274 5.726 8 C -0.281 4.281 9 C 0.607 3.393 10 O -0.575 6.575 11 N -0.632 5.632 12 C 0.084 3.916 13 C -0.115 4.115 14 C 0.127 3.873 15 C -0.105 4.105 16 C -0.151 4.151 17 C 0.067 3.933 18 F -0.242 7.242 19 C -0.132 4.132 20 C -0.066 4.066 21 H 0.070 0.930 22 H 0.092 0.908 23 H 0.062 0.938 24 H 0.137 0.863 25 H 0.388 0.612 26 H -0.260 1.260 27 H -0.271 1.271 28 H 0.115 0.885 29 H 0.096 0.904 30 H 0.103 0.897 31 H 0.133 0.867 32 H 0.073 0.927 33 H 0.142 0.858 34 H 0.062 0.938 35 H 0.084 0.916 36 H 0.108 0.892 37 H 0.120 0.880 38 H 0.040 0.960 39 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.417 7.991 -0.288 10.906 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.163 4.163 2 C -0.115 4.115 3 C -0.366 4.366 4 C -0.151 4.151 5 O -0.339 6.339 6 Si 0.631 3.369 7 S 0.544 5.456 8 C -0.400 4.400 9 C 0.398 3.602 10 O -0.456 6.456 11 N -0.365 5.365 12 C -0.037 4.037 13 C -0.152 4.152 14 C 0.042 3.958 15 C -0.143 4.143 16 C -0.170 4.170 17 C 0.013 3.987 18 F -0.223 7.223 19 C -0.170 4.170 20 C -0.101 4.101 21 H 0.089 0.911 22 H 0.111 0.889 23 H 0.081 0.919 24 H 0.154 0.846 25 H 0.238 0.762 26 H -0.185 1.185 27 H -0.196 1.196 28 H 0.133 0.867 29 H 0.114 0.886 30 H 0.121 0.879 31 H 0.151 0.849 32 H 0.092 0.908 33 H 0.159 0.841 34 H 0.081 0.919 35 H 0.102 0.898 36 H 0.126 0.874 37 H 0.138 0.862 38 H 0.059 0.941 39 H 0.155 0.845 Dipole moment (debyes) X Y Z Total from point charges 8.244 8.992 -0.300 12.203 hybrid contribution -2.888 -2.045 -0.914 3.655 sum 5.356 6.947 -1.214 8.855 Atomic orbital electron populations 1.20723 0.88645 1.03741 1.03185 1.18706 0.98656 0.90571 1.03598 1.24821 1.00194 1.00892 1.10685 1.24712 0.98187 0.94969 0.97228 1.86561 1.34906 1.91799 1.20682 0.94617 0.79878 0.77071 0.85349 1.82363 1.01022 0.95323 1.66871 1.24592 0.97225 0.98914 1.19304 1.16809 0.80820 0.86870 0.75665 1.90825 1.81564 1.20331 1.52929 1.49559 1.02440 1.12856 1.71646 1.23573 0.89602 0.87284 1.03260 1.23310 0.99386 0.91368 1.01160 1.22652 0.81181 0.93937 0.97996 1.23141 1.03298 0.91899 0.96005 1.23084 0.99433 0.95926 0.98549 1.22244 0.99465 0.81887 0.95132 1.92727 1.93637 1.57596 1.78364 1.23100 1.02881 0.95071 0.95948 1.20743 0.91466 1.00104 0.97752 0.91116 0.88918 0.91919 0.84587 0.76170 1.18489 1.19575 0.86705 0.88631 0.87859 0.84926 0.90813 0.84054 0.91908 0.89756 0.87351 0.86183 0.94071 0.84506 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -0.19 9.74 71.24 0.69 0.50 16 2 C -0.10 -0.36 5.75 -21.05 -0.12 -0.48 16 3 C -0.25 0.08 5.61 24.68 0.14 0.22 16 4 C -0.04 0.12 2.68 71.23 0.19 0.32 16 5 O -0.53 0.55 10.27 -148.98 -1.53 -0.98 16 6 Si 0.73 -3.80 30.97 68.60 2.12 -1.67 16 7 S 0.27 -0.67 17.10 -56.49 -0.97 -1.63 16 8 C -0.28 -1.75 6.45 24.08 0.16 -1.59 16 9 C 0.61 6.21 8.02 86.42 0.69 6.90 16 10 O -0.57 -11.07 16.61 -4.37 -0.07 -11.14 16 11 N -0.63 -1.38 3.69 -825.49 -3.05 -4.43 16 12 C 0.08 -0.65 7.25 82.35 0.60 -0.05 16 13 C -0.11 1.14 8.24 30.82 0.25 1.39 16 14 C 0.13 -0.27 1.43 -0.57 0.00 -0.27 16 15 C -0.11 0.51 7.52 30.93 0.23 0.74 16 16 C -0.15 -0.42 4.11 -10.18 -0.04 -0.46 16 17 C 0.07 0.01 7.33 71.98 0.53 0.54 16 18 F -0.24 -2.29 17.30 44.97 0.78 -1.52 16 19 C -0.13 -0.32 7.13 30.93 0.22 -0.10 16 20 C -0.07 -0.49 9.78 21.72 0.21 -0.27 16 21 H 0.07 0.10 8.14 -2.39 -0.02 0.08 16 22 H 0.09 0.12 5.54 -2.39 -0.01 0.11 16 23 H 0.06 0.12 8.10 -2.39 -0.02 0.10 16 24 H 0.14 -0.65 7.96 -2.39 -0.02 -0.67 16 25 H 0.39 -2.33 8.70 -74.06 -0.64 -2.97 16 26 H -0.26 0.52 7.11 99.48 0.71 1.22 16 27 H -0.27 -0.33 7.11 99.48 0.71 0.38 16 28 H 0.12 -1.32 8.14 -2.39 -0.02 -1.34 16 29 H 0.10 -0.95 6.39 -2.38 -0.02 -0.97 16 30 H 0.10 -0.98 8.14 -2.39 -0.02 -1.00 16 31 H 0.13 -2.13 8.14 -2.39 -0.02 -2.15 16 32 H 0.07 -0.25 8.14 -2.39 -0.02 -0.27 16 33 H 0.14 -1.71 8.04 -2.39 -0.02 -1.73 16 34 H 0.06 0.71 7.73 -2.38 -0.02 0.70 16 35 H 0.08 -0.18 8.14 -2.38 -0.02 -0.20 16 36 H 0.11 -0.70 8.06 -2.39 -0.02 -0.71 16 37 H 0.12 -0.32 8.10 -2.38 -0.02 -0.34 16 38 H 0.04 0.45 7.85 -2.39 -0.02 0.43 16 39 H 0.14 1.29 8.06 -2.91 -0.02 1.26 16 Total: 0.00 -23.58 334.57 1.51 -22.07 By element: Atomic # 1 Polarization: -8.55 SS G_CDS: 0.47 Total: -8.08 kcal Atomic # 6 Polarization: 3.63 SS G_CDS: 3.75 Total: 7.38 kcal Atomic # 7 Polarization: -1.38 SS G_CDS: -3.05 Total: -4.43 kcal Atomic # 8 Polarization: -10.52 SS G_CDS: -1.60 Total: -12.12 kcal Atomic # 9 Polarization: -2.29 SS G_CDS: 0.78 Total: -1.52 kcal Atomic # 14 Polarization: -3.80 SS G_CDS: 2.12 Total: -1.67 kcal Atomic # 16 Polarization: -0.67 SS G_CDS: -0.97 Total: -1.63 kcal Total: -23.58 1.51 -22.07 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_17321334_6739946.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 7.617 kcal (2) G-P(sol) polarization free energy of solvation -23.584 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -15.966 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.510 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.073 kcal (6) G-S(sol) free energy of system = (1) + (5) -14.456 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds