Wall clock time and date at job start Thu Mar 4 2021 13:50:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45196 * 1 3 3 C 1.34227 * 117.00285 * 2 1 4 4 O 1.20828 * 119.99305 * 359.97438 * 3 2 1 5 5 C 1.50694 * 120.00083 * 179.97438 * 3 2 1 6 6 C 1.53009 * 109.46922 * 180.02562 * 5 3 2 7 7 H 1.09004 * 112.84430 * 316.18952 * 6 5 3 8 8 C 1.53949 * 113.74421 * 87.40471 * 6 5 3 9 9 C 1.53779 * 87.01956 * 139.94540 * 8 6 5 10 10 H 1.08994 * 113.62183 * 89.22802 * 9 8 6 11 11 N 1.46507 * 113.61215 * 220.04786 * 9 8 6 12 12 C 1.34777 * 119.99886 * 254.13567 * 11 9 8 13 13 O 1.21590 * 119.99903 * 359.97438 * 12 11 9 14 14 C 1.47575 * 119.99953 * 179.97438 * 12 11 9 15 15 C 1.36492 * 120.00808 * 180.02562 * 14 12 11 16 16 N 1.35946 * 120.50392 * 180.02562 * 15 14 12 17 17 C 1.37003 * 132.41458 * 179.97438 * 16 15 14 18 18 C 1.50694 * 126.42801 * 359.95275 * 17 16 15 19 19 O 1.42896 * 109.47183 * 30.00419 * 18 17 16 20 20 Si 1.86306 * 109.46884 * 150.00046 * 18 17 16 21 21 C 1.35006 * 107.14249 * 179.97438 * 17 16 15 22 22 N 1.33584 * 108.65516 * 359.97438 * 21 17 16 23 23 C 1.32414 * 109.22643 * 0.02562 * 22 21 17 24 24 C 1.41249 * 132.11666 * 179.97438 * 23 22 21 25 25 Br 1.89097 * 120.25584 * 0.05493 * 24 23 22 26 26 C 1.35709 * 119.48587 * 180.02562 * 24 23 22 27 27 C 1.53781 * 113.61210 * 185.00268 * 6 5 3 28 28 H 1.08998 * 109.46931 * 60.00405 * 1 2 3 29 29 H 1.09003 * 109.47289 * 179.97438 * 1 2 3 30 30 H 1.08999 * 109.47352 * 300.00177 * 1 2 3 31 31 H 1.09000 * 109.47154 * 60.00183 * 5 3 2 32 32 H 1.08996 * 109.47353 * 299.99781 * 5 3 2 33 33 H 1.09000 * 113.61677 * 25.42038 * 8 6 5 34 34 H 1.09002 * 113.66098 * 254.47157 * 8 6 5 35 35 H 0.96999 * 119.99769 * 74.13473 * 11 9 8 36 36 H 1.07999 * 119.75121 * 359.92255 * 15 14 12 37 37 H 1.08994 * 109.47094 * 269.99779 * 18 17 16 38 38 H 0.96698 * 114.00255 * 59.99715 * 19 18 17 39 39 H 1.48504 * 109.99807 * 179.97438 * 20 18 17 40 40 H 1.48492 * 110.00037 * 301.31717 * 20 18 17 41 41 H 1.07996 * 125.67517 * 179.97438 * 21 17 16 42 42 H 1.08000 * 120.22982 * 180.02562 * 26 24 23 43 43 H 1.08997 * 113.61391 * 105.38473 * 27 6 5 44 44 H 1.08999 * 113.69208 * 334.49336 * 27 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4032 2.2092 -0.0005 5 6 3.5663 1.2748 0.0006 6 6 4.0001 2.7420 0.0011 7 1 3.4252 3.3536 -0.6944 8 6 4.1141 3.3542 1.4090 9 6 5.3807 4.0684 0.9085 10 1 5.1848 5.0428 0.4611 11 7 6.4637 4.1026 1.8947 12 6 6.7531 5.2509 2.5381 13 8 6.1158 6.2586 2.2997 14 6 7.8435 5.2853 3.5319 15 6 8.1365 6.4480 4.1839 16 7 9.1392 6.4912 5.1009 17 6 9.6335 7.5018 5.8828 18 6 9.1453 8.9271 5.9172 19 8 7.7511 8.9607 5.6060 20 14 9.4192 9.6364 7.6181 21 6 10.6403 6.9813 6.6163 22 7 10.7718 5.6889 6.3051 23 6 9.8726 5.3675 5.3878 24 6 9.5870 4.1529 4.7259 25 35 10.5902 2.5976 5.1139 26 6 8.5868 4.1106 3.8097 27 6 5.5209 2.9348 -0.1212 28 1 -0.3633 0.5138 -0.8900 29 1 -0.3634 -1.0277 -0.0005 30 1 -0.3634 0.5138 0.8899 31 1 3.9563 0.7805 -0.8892 32 1 3.9557 0.7809 0.8908 33 1 4.3072 2.6193 2.1905 34 1 3.2991 4.0339 1.6578 35 1 6.9723 3.2987 2.0845 36 1 7.5685 7.3410 3.9686 37 1 9.6956 9.5173 5.1845 38 1 7.1991 8.4552 6.2182 39 1 8.9424 11.0420 7.6649 40 1 8.7000 8.8216 8.6299 41 1 11.2397 7.5201 7.3352 42 1 8.3579 3.1881 3.2968 43 1 5.8399 3.2763 -1.1058 44 1 6.1005 2.0855 0.2406 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_17321982_12335884.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:50:37 Heat of formation + Delta-G solvation = -24.511828 kcal Electronic energy + Delta-G solvation = -31496.829767 eV Core-core repulsion = 26850.861794 eV Total energy + Delta-G solvation = -4645.967974 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 424.051 amu Computer time = 1.12 seconds Orbital eigenvalues (eV) -44.27004 -41.76516 -41.25631 -39.71725 -38.49395 -38.08024 -37.49704 -35.51399 -34.86242 -32.67632 -31.88593 -31.34655 -30.26142 -28.43576 -26.92720 -26.69226 -26.13427 -24.12063 -24.08217 -22.59164 -22.07886 -21.68516 -20.60561 -19.55200 -18.77838 -18.49872 -18.25916 -17.94701 -17.68655 -17.55538 -17.50187 -17.00490 -16.32007 -16.21804 -16.12285 -15.93395 -15.86157 -15.53530 -14.92004 -14.85486 -14.67331 -14.49442 -14.12545 -13.94614 -13.54158 -13.43325 -13.37015 -13.33203 -13.05718 -12.92799 -12.83128 -12.74395 -12.19377 -12.16642 -11.87508 -11.81821 -11.54707 -11.47739 -11.38766 -11.36818 -11.30893 -11.22781 -11.07474 -10.25109 -10.00308 -9.09419 -4.95622 -0.92393 -0.38800 0.18679 0.95271 1.12038 1.18743 1.39434 1.66076 1.76883 1.79826 1.92584 2.02814 2.20728 2.81180 2.97256 3.13918 3.35372 3.42164 3.43756 3.46923 3.49778 3.77489 3.80588 3.85161 3.91291 4.13284 4.25347 4.27151 4.28389 4.31226 4.37942 4.43166 4.48734 4.49132 4.64415 4.68834 4.76139 4.79632 4.87854 4.94665 5.00711 5.10971 5.20947 5.31802 5.41161 5.54043 5.56823 6.16166 6.31754 6.48804 6.72141 6.97421 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.367 6.367 3 C 0.453 3.547 4 O -0.545 6.545 5 C -0.096 4.096 6 C -0.098 4.098 7 H 0.086 0.914 8 C -0.148 4.148 9 C 0.117 3.883 10 H 0.095 0.905 11 N -0.692 5.692 12 C 0.577 3.423 13 O -0.570 6.570 14 C -0.168 4.168 15 C 0.154 3.846 16 N -0.359 5.359 17 C -0.091 4.091 18 C -0.054 4.054 19 O -0.548 6.548 20 Si 0.818 3.182 21 C 0.046 3.954 22 N -0.492 5.492 23 C 0.223 3.777 24 C -0.079 4.079 25 Br 0.009 6.991 26 C -0.024 4.024 27 C -0.117 4.117 28 H 0.058 0.942 29 H 0.127 0.873 30 H 0.057 0.943 31 H 0.136 0.864 32 H 0.134 0.866 33 H 0.103 0.897 34 H 0.048 0.952 35 H 0.418 0.582 36 H 0.187 0.813 37 H 0.138 0.862 38 H 0.386 0.614 39 H -0.290 1.290 40 H -0.290 1.290 41 H 0.229 0.771 42 H 0.189 0.811 43 H 0.089 0.911 44 H 0.124 0.876 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.878 -5.207 -1.014 6.035 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 O -0.284 6.284 3 C 0.298 3.702 4 O -0.435 6.435 5 C -0.133 4.133 6 C -0.117 4.117 7 H 0.104 0.896 8 C -0.187 4.187 9 C 0.012 3.988 10 H 0.113 0.887 11 N -0.344 5.344 12 C 0.363 3.637 13 O -0.450 6.450 14 C -0.175 4.175 15 C 0.028 3.972 16 N -0.032 5.032 17 C -0.202 4.202 18 C -0.162 4.162 19 O -0.355 6.355 20 Si 0.719 3.281 21 C -0.103 4.103 22 N -0.211 5.211 23 C -0.022 4.022 24 C -0.162 4.162 25 Br 0.094 6.906 26 C -0.050 4.050 27 C -0.155 4.155 28 H 0.077 0.923 29 H 0.146 0.854 30 H 0.076 0.924 31 H 0.154 0.846 32 H 0.152 0.848 33 H 0.122 0.878 34 H 0.066 0.934 35 H 0.258 0.742 36 H 0.204 0.796 37 H 0.156 0.844 38 H 0.235 0.765 39 H -0.217 1.217 40 H -0.217 1.217 41 H 0.245 0.755 42 H 0.206 0.794 43 H 0.107 0.893 44 H 0.142 0.858 Dipole moment (debyes) X Y Z Total from point charges 3.022 -4.561 -0.456 5.490 hybrid contribution -2.334 0.421 -0.528 2.430 sum 0.687 -4.140 -0.985 4.310 Atomic orbital electron populations 1.23462 0.75441 1.05424 1.02172 1.86509 1.24485 1.33573 1.83819 1.24652 0.93776 0.80764 0.71000 1.90688 1.68404 1.37549 1.46852 1.21551 0.84782 0.98498 1.08476 1.22177 0.97244 0.94473 0.97846 0.89588 1.23631 0.97234 1.00128 0.97720 1.22556 0.86336 1.00064 0.89817 0.88655 1.45697 1.36172 1.11620 1.40880 1.17660 0.81919 0.83878 0.80245 1.90851 1.52861 1.35175 1.66138 1.19270 1.01716 0.93551 1.02996 1.22196 0.87622 1.00939 0.86487 1.42744 1.23092 1.10767 1.26635 1.22408 1.04053 0.92671 1.01035 1.25221 0.83111 0.90859 1.16973 1.86593 1.17063 1.75623 1.56240 0.93469 0.89930 0.75540 0.69137 1.23031 0.96931 0.89939 1.00433 1.70845 1.21360 1.15228 1.13671 1.20764 0.93675 0.88342 0.99371 1.20599 1.01819 0.91390 1.02357 1.96843 1.71525 1.27520 1.94716 1.21368 0.90752 0.99013 0.93882 1.23379 0.94587 0.97973 0.99544 0.92297 0.85437 0.92401 0.84612 0.84817 0.87827 0.93351 0.74231 0.79578 0.84421 0.76483 1.21691 1.21655 0.75496 0.79394 0.89268 0.85802 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.56 113.37 1.20 1.16 16 2 O -0.37 -0.45 10.56 -51.38 -0.54 -0.99 16 3 C 0.45 0.78 7.96 71.23 0.57 1.34 16 4 O -0.54 -5.17 15.51 21.96 0.34 -4.83 16 5 C -0.10 0.73 5.65 29.85 0.17 0.90 16 6 C -0.10 0.51 3.15 -10.21 -0.03 0.48 16 7 H 0.09 -0.03 7.68 -2.38 -0.02 -0.05 16 8 C -0.15 0.41 7.45 31.18 0.23 0.65 16 9 C 0.12 -0.42 4.21 45.52 0.19 -0.23 16 10 H 0.10 0.19 7.50 -2.39 -0.02 0.17 16 11 N -0.69 3.58 5.31 -443.15 -2.35 1.22 16 12 C 0.58 1.11 7.76 86.71 0.67 1.78 16 13 O -0.57 -6.10 15.89 -4.00 -0.06 -6.16 16 14 C -0.17 -0.02 5.84 -20.35 -0.12 -0.14 16 15 C 0.15 0.43 9.91 83.65 0.83 1.26 16 16 N -0.36 -1.32 2.93 -337.72 -0.99 -2.31 16 17 C -0.09 -0.08 6.24 41.01 0.26 0.18 16 18 C -0.05 0.14 3.06 71.23 0.22 0.36 16 19 O -0.55 -0.44 10.90 -148.98 -1.62 -2.07 16 20 Si 0.82 -4.12 31.18 68.60 2.14 -1.99 16 21 C 0.05 0.03 10.44 83.68 0.87 0.90 16 22 N -0.49 -3.37 11.30 -194.11 -2.19 -5.56 16 23 C 0.22 1.27 7.59 134.18 1.02 2.29 16 24 C -0.08 -0.14 6.24 22.42 0.14 0.00 16 25 Br 0.01 0.01 33.72 -20.37 -0.69 -0.68 16 26 C -0.02 0.08 9.26 22.55 0.21 0.29 16 27 C -0.12 1.17 7.39 31.12 0.23 1.40 16 28 H 0.06 -0.02 8.13 -2.39 -0.02 -0.04 16 29 H 0.13 -0.89 8.14 -2.39 -0.02 -0.90 16 30 H 0.06 -0.01 8.13 -2.39 -0.02 -0.03 16 31 H 0.14 -1.64 8.14 -2.39 -0.02 -1.66 16 32 H 0.13 -1.65 7.86 -2.39 -0.02 -1.67 16 33 H 0.10 -0.65 7.91 -2.39 -0.02 -0.67 16 34 H 0.05 0.18 8.14 -2.39 -0.02 0.16 16 35 H 0.42 -5.16 6.74 -92.71 -0.63 -5.79 16 36 H 0.19 0.71 6.19 -2.91 -0.02 0.69 16 37 H 0.14 -0.67 7.96 -2.39 -0.02 -0.69 16 38 H 0.39 -1.29 8.70 -74.06 -0.64 -1.94 16 39 H -0.29 -0.55 7.11 99.48 0.71 0.16 16 40 H -0.29 -0.25 7.11 99.48 0.71 0.45 16 41 H 0.23 -1.83 6.90 -2.91 -0.02 -1.85 16 42 H 0.19 -2.16 6.44 -2.91 -0.02 -2.18 16 43 H 0.09 -0.90 8.14 -2.39 -0.02 -0.91 16 44 H 0.12 -1.95 8.07 -2.39 -0.02 -1.97 16 Total: 0.00 -30.02 395.01 0.53 -29.49 By element: Atomic # 1 Polarization: -18.59 SS G_CDS: -0.14 Total: -18.73 kcal Atomic # 6 Polarization: 5.96 SS G_CDS: 6.65 Total: 12.61 kcal Atomic # 7 Polarization: -1.11 SS G_CDS: -5.54 Total: -6.65 kcal Atomic # 8 Polarization: -12.16 SS G_CDS: -1.89 Total: -14.05 kcal Atomic # 14 Polarization: -4.12 SS G_CDS: 2.14 Total: -1.99 kcal Atomic # 35 Polarization: 0.01 SS G_CDS: -0.69 Total: -0.68 kcal Total: -30.02 0.53 -29.49 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_17321982_12335884.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 4.977 kcal (2) G-P(sol) polarization free energy of solvation -30.022 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -25.045 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.533 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.489 kcal (6) G-S(sol) free energy of system = (1) + (5) -24.512 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.12 seconds