Wall clock time and date at job start Thu Mar 4 2021 12:46:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45203 * 1 3 3 C 1.34223 * 116.99814 * 2 1 4 4 O 1.20824 * 120.00716 * 0.02562 * 3 2 1 5 5 C 1.50706 * 120.00010 * 180.02562 * 3 2 1 6 6 C 1.52997 * 109.47357 * 180.02562 * 5 3 2 7 7 C 1.52999 * 109.47036 * 179.97438 * 6 5 3 8 8 H 1.08997 * 112.85211 * 316.19514 * 7 6 5 9 9 C 1.53782 * 113.69021 * 87.46791 * 7 6 5 10 10 C 1.53784 * 87.08119 * 139.99006 * 9 7 6 11 11 H 1.08998 * 113.68947 * 220.00525 * 10 9 7 12 12 N 1.46499 * 113.61396 * 89.11604 * 10 9 7 13 13 C 1.34778 * 120.00304 * 107.50043 * 12 10 9 14 14 O 1.21576 * 119.99449 * 0.02562 * 13 12 10 15 15 C 1.47705 * 120.00345 * 179.97438 * 13 12 10 16 16 N 1.31814 * 126.51590 * 359.97438 * 15 13 12 17 17 N 1.28468 * 110.07177 * 180.02562 * 16 15 13 18 18 C 1.46502 * 124.88202 * 179.97438 * 17 16 15 19 19 C 1.35034 * 110.23105 * 0.02562 * 17 16 15 20 20 C 1.50702 * 126.38682 * 180.02562 * 19 17 16 21 21 O 1.42907 * 109.46844 * 329.97813 * 20 19 17 22 22 Si 1.86294 * 109.47091 * 209.97879 * 20 19 17 23 23 C 1.35371 * 107.22924 * 359.97438 * 19 17 16 24 24 C 1.53781 * 87.08104 * 334.56673 * 10 9 7 25 25 H 1.09003 * 109.47299 * 179.97438 * 1 2 3 26 26 H 1.09004 * 109.47035 * 300.00022 * 1 2 3 27 27 H 1.09002 * 109.46994 * 60.00028 * 1 2 3 28 28 H 1.08996 * 109.47011 * 59.99691 * 5 3 2 29 29 H 1.08997 * 109.46596 * 300.00235 * 5 3 2 30 30 H 1.09001 * 109.47043 * 60.00192 * 6 5 3 31 31 H 1.09000 * 109.47279 * 300.00193 * 6 5 3 32 32 H 1.08998 * 113.61595 * 25.44106 * 9 7 6 33 33 H 1.09001 * 113.60917 * 254.54082 * 9 7 6 34 34 H 0.96998 * 119.99689 * 287.50223 * 12 10 9 35 35 H 1.08994 * 109.46809 * 90.03071 * 18 17 16 36 36 H 1.09002 * 109.46891 * 210.02241 * 18 17 16 37 37 H 1.08999 * 109.46998 * 330.02418 * 18 17 16 38 38 H 1.09001 * 109.47200 * 89.97441 * 20 19 17 39 39 H 0.96693 * 113.99705 * 299.99794 * 21 20 19 40 40 H 1.48500 * 110.00095 * 179.97438 * 22 20 19 41 41 H 1.48503 * 110.00275 * 301.31510 * 22 20 19 42 42 H 1.07998 * 127.24848 * 180.02562 * 23 19 17 43 43 H 1.08992 * 113.61320 * 139.98320 * 24 10 9 44 44 H 1.09002 * 113.61134 * 270.79740 * 24 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4034 2.2093 0.0005 5 6 3.5663 1.2749 -0.0006 6 6 4.0001 2.7421 0.0002 7 6 5.5280 2.8221 0.0002 8 1 5.9887 2.1200 0.6951 9 6 6.1483 2.7930 -1.4066 10 6 7.1398 3.8566 -0.9059 11 1 7.3535 4.6353 -1.6380 12 7 8.3511 3.2930 -0.3049 13 6 9.5254 3.3634 -0.9627 14 8 9.5794 3.8952 -2.0546 15 6 10.7468 2.7956 -0.3565 16 7 10.8355 2.1954 0.8137 17 7 12.0467 1.8248 1.0284 18 6 12.5088 1.1277 2.2312 19 6 12.8327 2.1712 -0.0135 20 6 14.3117 1.9124 -0.1425 21 8 14.9087 1.9036 1.1559 22 14 15.0893 3.2544 -1.1744 23 6 12.0442 2.7934 -0.9211 24 6 6.0698 4.2561 0.1238 25 1 -0.3634 -1.0277 -0.0005 26 1 -0.3633 0.5139 0.8900 27 1 -0.3633 0.5138 -0.8900 28 1 3.9557 0.7809 -0.8908 29 1 3.9563 0.7806 0.8891 30 1 3.6108 3.2356 0.8907 31 1 3.6100 3.2368 -0.8893 32 1 5.4782 3.1538 -2.1869 33 1 6.6179 1.8418 -1.6571 34 1 8.3080 2.8690 0.5665 35 1 12.4268 0.0512 2.0813 36 1 13.5490 1.3892 2.4256 37 1 11.8946 1.4240 3.0815 38 1 14.4711 0.9467 -0.6222 39 1 14.8055 2.7331 1.6418 40 1 16.5481 3.0110 -1.3087 41 1 14.4551 3.2949 -2.5166 42 1 12.3426 3.2019 -1.8753 43 1 6.4759 4.4860 1.1088 44 1 5.3790 5.0179 -0.2375 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_17523010_13259642.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 12:46:06 Heat of formation + Delta-G solvation = -47.617422 kcal Electronic energy + Delta-G solvation = -26786.485130 eV Core-core repulsion = 22708.474028 eV Total energy + Delta-G solvation = -4078.011102 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 324.156 amu Computer time = 0.96 seconds Orbital eigenvalues (eV) -43.86297 -41.59792 -41.12802 -39.41532 -38.09968 -37.64310 -35.15592 -34.39903 -33.29387 -32.46479 -29.22447 -28.56318 -27.09899 -26.69463 -26.47336 -24.57724 -23.11281 -22.26931 -21.59800 -21.09925 -20.23456 -19.11386 -18.62313 -17.69839 -17.64299 -17.53436 -17.51274 -17.11669 -16.92317 -16.08687 -15.97635 -15.84689 -15.71157 -15.27813 -15.16522 -15.05079 -14.63706 -14.39188 -14.12052 -14.00230 -13.63602 -13.43650 -13.40712 -13.38574 -13.03496 -12.66350 -12.58779 -12.34251 -12.14406 -11.89796 -11.86391 -11.83661 -11.66226 -11.33879 -11.28067 -11.07068 -10.86033 -10.31701 -10.00027 -9.97681 -4.96740 0.41605 0.78848 1.14652 1.18690 1.55075 1.71101 1.77401 1.97189 2.08061 2.25710 3.12914 3.32221 3.33299 3.52521 3.53265 3.72267 3.86514 3.88406 4.03007 4.20208 4.24380 4.27934 4.31046 4.31861 4.34237 4.39677 4.50312 4.54225 4.58794 4.61233 4.69204 4.77402 4.80742 4.83039 4.89037 4.91275 5.04935 5.13224 5.19028 5.25222 5.31463 5.40976 5.61922 5.68263 6.36700 6.53512 6.68629 6.80947 7.10009 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.369 6.369 3 C 0.455 3.545 4 O -0.545 6.545 5 C -0.109 4.109 6 C -0.094 4.094 7 C -0.097 4.097 8 H 0.108 0.892 9 C -0.146 4.146 10 C 0.108 3.892 11 H 0.086 0.914 12 N -0.687 5.687 13 C 0.605 3.395 14 O -0.570 6.570 15 C -0.038 4.038 16 N -0.259 5.259 17 N -0.257 5.257 18 C 0.062 3.938 19 C -0.006 4.006 20 C -0.034 4.034 21 O -0.541 6.541 22 Si 0.789 3.211 23 C -0.198 4.198 24 C -0.131 4.131 25 H 0.127 0.873 26 H 0.060 0.940 27 H 0.059 0.941 28 H 0.121 0.879 29 H 0.128 0.872 30 H 0.068 0.932 31 H 0.064 0.936 32 H 0.095 0.905 33 H 0.067 0.933 34 H 0.416 0.584 35 H 0.089 0.911 36 H 0.138 0.862 37 H 0.106 0.894 38 H 0.128 0.872 39 H 0.400 0.600 40 H -0.280 1.280 41 H -0.292 1.292 42 H 0.159 0.841 43 H 0.083 0.917 44 H 0.102 0.898 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.977 -2.618 6.531 7.640 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.285 6.285 3 C 0.301 3.699 4 O -0.435 6.435 5 C -0.146 4.146 6 C -0.131 4.131 7 C -0.115 4.115 8 H 0.126 0.874 9 C -0.185 4.185 10 C 0.003 3.997 11 H 0.104 0.896 12 N -0.337 5.337 13 C 0.391 3.609 14 O -0.448 6.448 15 C -0.196 4.196 16 N -0.097 5.097 17 N -0.046 5.046 18 C -0.076 4.076 19 C -0.132 4.132 20 C -0.145 4.145 21 O -0.349 6.349 22 Si 0.693 3.307 23 C -0.226 4.226 24 C -0.169 4.169 25 H 0.146 0.854 26 H 0.079 0.921 27 H 0.078 0.922 28 H 0.139 0.861 29 H 0.146 0.854 30 H 0.087 0.913 31 H 0.083 0.917 32 H 0.114 0.886 33 H 0.086 0.914 34 H 0.253 0.747 35 H 0.107 0.893 36 H 0.156 0.844 37 H 0.125 0.875 38 H 0.145 0.855 39 H 0.251 0.749 40 H -0.207 1.207 41 H -0.219 1.219 42 H 0.177 0.823 43 H 0.102 0.898 44 H 0.120 0.880 Dipole moment (debyes) X Y Z Total from point charges 2.768 -2.751 5.928 7.097 hybrid contribution -0.425 -0.485 -0.601 0.881 sum 2.344 -3.236 5.327 6.659 Atomic orbital electron populations 1.23492 0.75246 1.05492 1.02335 1.86515 1.24694 1.33554 1.83757 1.24598 0.93598 0.80806 0.70943 1.90673 1.68391 1.37428 1.46978 1.21557 0.84835 1.00534 1.07689 1.21352 0.94786 0.93761 1.03242 1.22556 0.93996 0.97636 0.97303 0.87436 1.23529 0.97861 0.99337 0.97730 1.21961 0.83535 0.96982 0.97267 0.89618 1.45415 1.06568 1.59101 1.22655 1.17062 0.82233 0.77859 0.83774 1.90791 1.86123 1.46131 1.21741 1.21704 0.95470 1.07821 0.94580 1.73468 1.03660 1.14931 1.17617 1.45740 1.03313 1.39130 1.16439 1.22971 1.04588 0.97546 0.82483 1.22077 0.96605 1.03942 0.90582 1.24805 0.85701 1.11014 0.92977 1.86450 1.77892 1.42894 1.27667 0.93159 0.75813 0.83833 0.77888 1.21617 0.91821 1.06840 1.02307 1.23332 0.96504 0.97604 0.99487 0.85440 0.92089 0.92237 0.86081 0.85419 0.91281 0.91716 0.88618 0.91400 0.74675 0.89284 0.84428 0.87516 0.85500 0.74855 1.20686 1.21934 0.82319 0.89807 0.87985 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 10.56 113.37 1.20 1.19 16 2 O -0.37 -1.19 10.57 -51.35 -0.54 -1.73 16 3 C 0.46 1.77 7.96 71.24 0.57 2.34 16 4 O -0.54 -5.82 15.73 21.97 0.35 -5.48 16 5 C -0.11 0.41 5.80 29.85 0.17 0.58 16 6 C -0.09 0.26 4.34 30.59 0.13 0.40 16 7 C -0.10 0.48 3.52 -10.27 -0.04 0.44 16 8 H 0.11 -0.80 8.13 -2.39 -0.02 -0.82 16 9 C -0.15 0.23 7.43 31.12 0.23 0.46 16 10 C 0.11 0.12 4.32 45.52 0.20 0.31 16 11 H 0.09 0.47 7.46 -2.39 -0.02 0.45 16 12 N -0.69 -1.69 5.26 -443.03 -2.33 -4.02 16 13 C 0.61 5.54 7.83 86.75 0.68 6.22 16 14 O -0.57 -9.40 16.52 -3.96 -0.07 -9.46 16 15 C -0.04 -0.26 7.13 42.45 0.30 0.04 16 16 N -0.26 -0.86 11.67 -48.18 -0.56 -1.43 16 17 N -0.26 0.22 3.70 -355.92 -1.32 -1.10 16 18 C 0.06 -0.52 11.00 127.77 1.41 0.88 16 19 C -0.01 0.00 6.18 41.40 0.26 0.26 16 20 C -0.03 0.17 2.99 71.24 0.21 0.38 16 21 O -0.54 4.45 10.02 -148.98 -1.49 2.96 16 22 Si 0.79 -3.19 31.37 68.60 2.15 -1.04 16 23 C -0.20 -0.99 9.35 22.41 0.21 -0.79 16 24 C -0.13 0.47 7.39 31.12 0.23 0.70 16 25 H 0.13 -0.76 8.14 -2.39 -0.02 -0.78 16 26 H 0.06 0.01 8.13 -2.38 -0.02 -0.01 16 27 H 0.06 0.03 8.13 -2.39 -0.02 0.01 16 28 H 0.12 -0.76 8.14 -2.39 -0.02 -0.78 16 29 H 0.13 -1.00 8.14 -2.39 -0.02 -1.02 16 30 H 0.07 -0.07 8.10 -2.39 -0.02 -0.09 16 31 H 0.06 -0.01 7.81 -2.39 -0.02 -0.03 16 32 H 0.10 -0.17 7.90 -2.39 -0.02 -0.19 16 33 H 0.07 -0.01 8.14 -2.39 -0.02 -0.03 16 34 H 0.42 -0.61 8.43 -92.71 -0.78 -1.39 16 35 H 0.09 -0.78 8.14 -2.39 -0.02 -0.80 16 36 H 0.14 -1.64 5.00 -2.39 -0.01 -1.65 16 37 H 0.11 -1.12 8.14 -2.39 -0.02 -1.14 16 38 H 0.13 -0.61 7.96 -2.39 -0.02 -0.63 16 39 H 0.40 -6.28 8.39 -74.06 -0.62 -6.90 16 40 H -0.28 -0.40 7.11 99.48 0.71 0.31 16 41 H -0.29 -0.94 6.83 99.48 0.68 -0.26 16 42 H 0.16 0.90 6.84 -2.91 -0.02 0.88 16 43 H 0.08 -0.40 8.14 -2.39 -0.02 -0.42 16 44 H 0.10 -0.39 8.10 -2.39 -0.02 -0.41 16 Total: 0.00 -25.15 371.96 1.59 -23.56 By element: Atomic # 1 Polarization: -15.33 SS G_CDS: -0.35 Total: -15.69 kcal Atomic # 6 Polarization: 7.66 SS G_CDS: 5.76 Total: 13.42 kcal Atomic # 7 Polarization: -2.34 SS G_CDS: -4.21 Total: -6.55 kcal Atomic # 8 Polarization: -11.95 SS G_CDS: -1.76 Total: -13.71 kcal Atomic # 14 Polarization: -3.19 SS G_CDS: 2.15 Total: -1.04 kcal Total: -25.15 1.59 -23.56 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_17523010_13259642.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -24.053 kcal (2) G-P(sol) polarization free energy of solvation -25.154 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -49.208 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.590 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.564 kcal (6) G-S(sol) free energy of system = (1) + (5) -47.617 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.96 seconds