Wall clock time and date at job start Thu Mar 4 2021 16:55:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46498 * 1 3 3 N 1.28467 * 124.88570 * 2 1 4 4 C 1.31809 * 110.07284 * 180.02562 * 3 2 1 5 5 C 1.47711 * 126.51760 * 179.97438 * 4 3 2 6 6 O 1.21572 * 120.00178 * 180.02562 * 5 4 3 7 7 N 1.34780 * 119.99981 * 0.02562 * 5 4 3 8 8 C 1.46500 * 119.99929 * 179.97438 * 7 5 4 9 9 C 1.52997 * 109.46926 * 179.97438 * 8 7 5 10 10 N 1.46909 * 109.46937 * 174.60265 * 9 8 7 11 11 H 1.00896 * 108.91120 * 307.66792 * 10 9 8 12 12 C 1.46403 * 108.93007 * 188.97475 * 10 9 8 13 13 C 1.54028 * 109.43919 * 159.09281 * 12 10 9 14 14 Si 1.87620 * 106.67581 * 58.82383 * 13 12 10 15 15 C 1.86294 * 110.05388 * 197.41737 * 14 13 12 16 16 C 1.86301 * 110.14035 * 75.92909 * 14 13 12 17 17 C 1.87621 * 106.44345 * 316.65105 * 14 13 12 18 18 C 1.46414 * 108.92802 * 66.35475 * 10 9 8 19 19 C 1.41498 * 106.96392 * 359.76062 * 4 3 2 20 20 C 1.35031 * 124.88487 * 180.02562 * 2 1 3 21 21 C 1.50704 * 126.38449 * 359.94934 * 20 2 1 22 22 O 1.42903 * 109.47207 * 29.99732 * 21 20 2 23 23 Si 1.86302 * 109.47150 * 149.99425 * 21 20 2 24 24 H 1.48501 * 109.46824 * 60.00387 * 23 21 20 25 25 H 1.48501 * 109.47040 * 179.97438 * 23 21 20 26 26 H 1.48496 * 109.47133 * 300.00223 * 23 21 20 27 27 H 1.08998 * 109.47718 * 269.97416 * 1 2 3 28 28 H 1.09013 * 109.46871 * 29.96775 * 1 2 3 29 29 H 1.09005 * 109.47241 * 149.96330 * 1 2 3 30 30 H 0.96996 * 119.99610 * 359.97438 * 7 5 4 31 31 H 1.09000 * 109.47114 * 300.00334 * 8 7 5 32 32 H 1.09006 * 109.47149 * 59.99941 * 8 7 5 33 33 H 1.08993 * 109.47309 * 294.60147 * 9 8 7 34 34 H 1.08998 * 109.46856 * 54.60809 * 9 8 7 35 35 H 1.09001 * 109.47505 * 279.17553 * 12 10 9 36 36 H 1.08998 * 109.47172 * 39.16916 * 12 10 9 37 37 H 1.08994 * 110.06734 * 299.51614 * 13 12 10 38 38 H 1.09003 * 110.06830 * 178.13489 * 13 12 10 39 39 H 1.09001 * 109.47031 * 176.99911 * 15 14 13 40 40 H 1.08995 * 109.47597 * 297.00819 * 15 14 13 41 41 H 1.09003 * 109.46980 * 57.00541 * 15 14 13 42 42 H 1.08997 * 109.47227 * 302.94646 * 16 14 13 43 43 H 1.09000 * 109.46840 * 62.94539 * 16 14 13 44 44 H 1.08999 * 109.46651 * 182.94297 * 16 14 13 45 45 H 1.08996 * 109.99949 * 283.99658 * 17 14 13 46 46 H 1.08999 * 109.99512 * 162.60079 * 17 14 13 47 47 H 1.08998 * 109.46868 * 320.83179 * 18 10 9 48 48 H 1.08992 * 109.47124 * 80.82543 * 18 10 9 49 49 H 1.07995 * 127.25154 * 180.24545 * 19 4 3 50 50 H 1.08997 * 109.47307 * 269.99818 * 21 20 2 51 51 H 0.96703 * 113.99901 * 59.99558 * 22 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.1997 1.0538 0.0000 4 6 3.4740 0.7168 -0.0006 5 6 4.6273 1.6398 -0.0013 6 8 5.7597 1.1976 -0.0022 7 7 4.4241 2.9722 -0.0009 8 6 5.5679 3.8875 -0.0010 9 6 5.0648 5.3324 -0.0012 10 7 6.2060 6.2483 0.1290 11 1 6.7566 5.9732 0.9285 12 6 5.7030 7.6064 0.3432 13 6 6.8060 8.4656 0.9894 14 14 8.2673 8.4397 -0.1871 15 6 9.8116 8.9859 0.7003 16 6 7.9390 9.5555 -1.6424 17 6 8.4516 6.6646 -0.7661 18 6 7.0339 6.1495 -1.0746 19 6 3.5271 -0.6972 0.0047 20 6 2.2373 -1.1077 -0.0005 21 6 1.7533 -2.5349 -0.0001 22 8 0.4948 -2.6114 -0.6727 23 14 2.9938 -3.6115 -0.8793 24 1 4.3015 -3.5321 -0.1802 25 1 2.5172 -5.0180 -0.8783 26 1 3.1516 -3.1427 -2.2794 27 1 -0.3634 -0.0005 1.0276 28 1 -0.3633 0.8904 -0.5134 29 1 -0.3634 -0.8897 -0.5144 30 1 3.5206 3.3249 -0.0005 31 1 6.1730 3.7131 0.8887 32 1 6.1724 3.7136 -0.8913 33 1 4.5413 5.5347 -0.9355 34 1 4.3833 5.4798 0.8366 35 1 5.4146 8.0422 -0.6134 36 1 4.8362 7.5730 1.0031 37 1 7.0945 8.0422 1.9514 38 1 6.4533 9.4883 1.1233 39 1 10.6633 8.9165 0.0235 40 1 9.6944 10.0174 1.0323 41 1 9.9807 8.3432 1.5642 42 1 7.0203 9.2438 -2.1393 43 1 7.8336 10.5835 -1.2956 44 1 8.7710 9.4922 -2.3437 45 1 8.9046 6.0611 0.0204 46 1 9.0655 6.6280 -1.6660 47 1 7.0871 5.1089 -1.3946 48 1 6.5933 6.7518 -1.8690 49 1 4.4107 -1.3181 0.0095 50 1 1.6374 -2.8790 1.0277 51 1 0.5231 -2.3199 -1.5944 RHF calculation, no. of doubly occupied orbitals= 62 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_17567708_13259642.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 16:55:53 Heat of formation + Delta-G solvation = 80.395162 kcal Electronic energy + Delta-G solvation = -27775.214645 eV Core-core repulsion = 23953.519119 eV Total energy + Delta-G solvation = -3821.695526 eV No. of doubly occupied orbitals = 62 Molecular weight (most abundant/longest-lived isotopes) = 341.192 amu Computer time = 1.08 seconds Orbital eigenvalues (eV) -43.88064 -42.56246 -40.53052 -38.14451 -36.32673 -34.44465 -32.99077 -32.74808 -32.32146 -29.70793 -28.95189 -28.42945 -28.16053 -26.73543 -25.02063 -24.55782 -23.94709 -23.16447 -22.30009 -21.14699 -19.31306 -18.60220 -18.04522 -17.64049 -17.54312 -17.27604 -17.01936 -16.75182 -16.63177 -15.96621 -15.89860 -15.46494 -15.26488 -15.08946 -14.81353 -14.60745 -14.37666 -14.11159 -13.85150 -13.73138 -13.60788 -13.53909 -13.44753 -13.41087 -13.29550 -13.16282 -13.00795 -12.78138 -12.64421 -12.62326 -12.56548 -12.44597 -12.08411 -11.85933 -11.52673 -10.89268 -10.87756 -10.76952 -10.53145 -10.40760 -10.09419 -9.99082 0.38435 0.72015 0.75739 1.10268 1.45526 1.47365 1.52332 1.60087 1.70411 1.78512 1.92762 2.01762 2.22527 2.52359 2.78812 2.86384 3.09077 3.11848 3.30569 3.35078 3.49411 3.63626 3.78310 4.01063 4.03742 4.14421 4.19038 4.30556 4.37787 4.40592 4.43356 4.45620 4.49832 4.58593 4.59886 4.64565 4.69797 4.72538 4.74798 4.77276 4.78998 4.82189 4.87170 4.93491 5.14931 5.21061 5.30327 5.37924 5.57453 5.61274 5.65653 6.21985 6.43846 6.76127 7.01301 Molecular weight = 341.19amu Principal moments of inertia in cm(-1) A = 0.027315 B = 0.001952 C = 0.001873 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1024.838802 B =14337.182444 C =14945.053510 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.061 3.939 2 N -0.259 5.259 3 N -0.253 5.253 4 C -0.042 4.042 5 C 0.612 3.388 6 O -0.562 6.562 7 N -0.703 5.703 8 C 0.080 3.920 9 C -0.009 4.009 10 N -0.371 5.371 11 H 0.435 0.565 12 C 0.004 3.996 13 C -0.434 4.434 14 Si 1.097 2.903 15 C -0.504 4.504 16 C -0.490 4.490 17 C -0.441 4.441 18 C -0.008 4.008 19 C -0.205 4.205 20 C -0.012 4.012 21 C -0.044 4.044 22 O -0.541 6.541 23 Si 0.997 3.003 24 H -0.258 1.258 25 H -0.267 1.267 26 H -0.260 1.260 27 H 0.091 0.909 28 H 0.108 0.892 29 H 0.130 0.870 30 H 0.423 0.577 31 H 0.092 0.908 32 H 0.093 0.907 33 H 0.160 0.840 34 H 0.162 0.838 35 H 0.147 0.853 36 H 0.155 0.845 37 H 0.113 0.887 38 H 0.117 0.883 39 H 0.052 0.948 40 H 0.055 0.945 41 H 0.072 0.928 42 H 0.088 0.912 43 H 0.056 0.944 44 H 0.054 0.946 45 H 0.110 0.890 46 H 0.112 0.888 47 H 0.137 0.863 48 H 0.151 0.849 49 H 0.161 0.839 50 H 0.142 0.858 51 H 0.394 0.606 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.245 16.197 0.423 16.204 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 N -0.048 5.048 3 N -0.091 5.091 4 C -0.200 4.200 5 C 0.397 3.603 6 O -0.438 6.438 7 N -0.357 5.357 8 C -0.044 4.044 9 C -0.131 4.131 10 N 0.049 4.951 11 H 0.273 0.727 12 C -0.117 4.117 13 C -0.521 4.521 14 Si 1.285 2.715 15 C -0.606 4.606 16 C -0.594 4.594 17 C -0.527 4.527 18 C -0.129 4.129 19 C -0.234 4.234 20 C -0.137 4.137 21 C -0.156 4.156 22 O -0.348 6.348 23 Si 0.820 3.180 24 H -0.182 1.182 25 H -0.192 1.192 26 H -0.183 1.183 27 H 0.110 0.890 28 H 0.127 0.873 29 H 0.148 0.852 30 H 0.262 0.738 31 H 0.110 0.890 32 H 0.111 0.889 33 H 0.178 0.822 34 H 0.180 0.820 35 H 0.165 0.835 36 H 0.173 0.827 37 H 0.132 0.868 38 H 0.136 0.864 39 H 0.072 0.928 40 H 0.074 0.926 41 H 0.091 0.909 42 H 0.107 0.893 43 H 0.076 0.924 44 H 0.074 0.926 45 H 0.129 0.871 46 H 0.130 0.870 47 H 0.155 0.845 48 H 0.169 0.831 49 H 0.178 0.822 50 H 0.159 0.841 51 H 0.244 0.756 Dipole moment (debyes) X Y Z Total from point charges 0.022 16.242 0.323 16.245 hybrid contribution 0.928 0.037 0.001 0.929 sum 0.950 16.278 0.324 16.309 Atomic orbital electron populations 1.22948 0.70501 1.08066 1.06157 1.45671 1.09020 1.01721 1.48384 1.73380 1.02240 1.14541 1.18900 1.21839 0.91434 0.93974 1.12760 1.16742 0.85689 0.82384 0.75471 1.90853 1.23775 1.77916 1.51300 1.45278 1.11536 1.03984 1.74902 1.21983 0.89312 0.87394 1.05676 1.23954 0.89159 0.87100 1.12921 1.45269 1.15878 1.15391 1.18538 0.72663 1.23741 1.00738 0.78370 1.08815 1.26742 1.09495 1.05373 1.10518 0.78175 0.64298 0.65073 0.63921 1.26806 1.18870 1.05901 1.09047 1.26644 1.05554 1.11175 1.16050 1.26841 0.97219 1.18664 1.09945 1.23785 0.92266 1.09567 0.87321 1.21708 0.97085 0.94698 1.09860 1.22093 0.90997 0.92353 1.08299 1.24654 0.93960 0.92108 1.04869 1.86497 1.29257 1.88702 1.30374 0.84982 0.76373 0.77641 0.79019 1.18242 1.19153 1.18339 0.89018 0.87304 0.85175 0.73836 0.88959 0.88880 0.82204 0.81997 0.83528 0.82677 0.86812 0.86413 0.92836 0.92612 0.90906 0.89292 0.92442 0.92650 0.87149 0.86990 0.84526 0.83136 0.82192 0.84082 0.75600 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -1.61 11.00 127.77 1.41 -0.20 16 2 N -0.26 5.34 3.70 -355.91 -1.32 4.02 16 3 N -0.25 5.18 11.67 -48.18 -0.56 4.62 16 4 C -0.04 0.77 7.13 42.46 0.30 1.07 16 5 C 0.61 -13.77 7.83 86.75 0.68 -13.09 16 6 O -0.56 8.28 16.93 -3.94 -0.07 8.22 16 7 N -0.70 25.73 5.55 -466.09 -2.59 23.14 16 8 C 0.08 -3.81 5.39 86.38 0.47 -3.34 16 9 C -0.01 0.54 4.70 86.30 0.41 0.95 16 10 N -0.37 23.28 0.33 -894.77 -0.30 22.98 16 11 H 0.44 -28.50 7.44 -89.70 -0.67 -29.17 16 12 C 0.00 -0.22 5.10 86.75 0.44 0.22 16 13 C -0.43 23.27 4.98 72.33 0.36 23.63 16 14 Si 1.10 -51.75 11.69 68.60 0.80 -50.95 16 15 C -0.50 16.75 8.65 113.37 0.98 17.74 16 16 C -0.49 18.77 8.65 113.37 0.98 19.75 16 17 C -0.44 22.57 4.98 72.31 0.36 22.93 16 18 C -0.01 0.48 4.92 86.72 0.43 0.91 16 19 C -0.21 3.29 9.35 22.41 0.21 3.49 16 20 C -0.01 0.23 6.17 41.40 0.26 0.48 16 21 C -0.04 0.94 2.99 71.24 0.21 1.15 16 22 O -0.54 12.18 10.02 -148.98 -1.49 10.69 16 23 Si 1.00 -18.10 26.64 68.60 1.83 -16.27 16 24 H -0.26 4.11 6.87 99.48 0.68 4.79 16 25 H -0.27 3.80 7.11 99.48 0.71 4.50 16 26 H -0.26 4.29 7.11 99.48 0.71 5.00 16 27 H 0.09 -2.42 8.14 -2.39 -0.02 -2.44 16 28 H 0.11 -3.14 8.14 -2.38 -0.02 -3.16 16 29 H 0.13 -3.59 5.00 -2.38 -0.01 -3.60 16 30 H 0.42 -17.09 8.20 -92.71 -0.76 -17.85 16 31 H 0.09 -4.36 8.09 -2.39 -0.02 -4.38 16 32 H 0.09 -4.37 6.32 -2.38 -0.02 -4.38 16 33 H 0.16 -10.15 8.08 -2.39 -0.02 -10.17 16 34 H 0.16 -10.36 7.72 -2.39 -0.02 -10.38 16 35 H 0.15 -9.31 7.42 -2.39 -0.02 -9.32 16 36 H 0.16 -9.97 7.58 -2.39 -0.02 -9.99 16 37 H 0.11 -6.21 7.98 -2.39 -0.02 -6.23 16 38 H 0.12 -5.90 7.99 -2.39 -0.02 -5.92 16 39 H 0.05 -1.51 7.96 -2.39 -0.02 -1.53 16 40 H 0.05 -1.60 7.96 -2.39 -0.02 -1.62 16 41 H 0.07 -2.43 7.96 -2.39 -0.02 -2.45 16 42 H 0.09 -3.78 7.96 -2.39 -0.02 -3.80 16 43 H 0.06 -1.90 7.96 -2.39 -0.02 -1.92 16 44 H 0.05 -1.81 7.96 -2.39 -0.02 -1.82 16 45 H 0.11 -5.71 7.98 -2.39 -0.02 -5.73 16 46 H 0.11 -5.26 7.99 -2.39 -0.02 -5.28 16 47 H 0.14 -7.86 5.72 -2.39 -0.01 -7.88 16 48 H 0.15 -9.22 7.42 -2.39 -0.02 -9.24 16 49 H 0.16 -2.47 6.87 -2.91 -0.02 -2.49 16 50 H 0.14 -3.26 7.96 -2.39 -0.02 -3.28 16 51 H 0.39 -11.23 8.39 -74.06 -0.62 -11.85 16 Total: 1.00 -82.86 397.70 3.42 -79.43 By element: Atomic # 1 Polarization: -161.20 SS G_CDS: -0.37 Total: -161.57 kcal Atomic # 6 Polarization: 68.21 SS G_CDS: 7.49 Total: 75.70 kcal Atomic # 7 Polarization: 59.53 SS G_CDS: -4.76 Total: 54.76 kcal Atomic # 8 Polarization: 20.47 SS G_CDS: -1.56 Total: 18.91 kcal Atomic # 14 Polarization: -69.85 SS G_CDS: 2.63 Total: -67.22 kcal Total: -82.86 3.42 -79.43 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_17567708_13259642.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 159.826 kcal (2) G-P(sol) polarization free energy of solvation -82.856 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 76.970 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 3.425 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -79.431 kcal (6) G-S(sol) free energy of system = (1) + (5) 80.395 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.08 seconds