Wall clock time and date at job start Thu Mar 4 2021 16:58:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 N 1.28474 * 124.88514 * 2 1 4 4 C 1.31809 * 110.07151 * 180.13337 * 3 2 1 5 5 C 1.47712 * 126.51252 * 179.86131 * 4 3 2 6 6 O 1.21575 * 119.99367 * 179.68962 * 5 4 3 7 7 N 1.34772 * 120.00529 * 359.68585 * 5 4 3 8 8 C 1.46500 * 120.00404 * 180.02562 * 7 5 4 9 9 C 1.52999 * 109.47393 * 180.02562 * 8 7 5 10 10 H 1.09000 * 112.85280 * 43.79279 * 9 8 7 11 11 C 1.53775 * 113.61558 * 174.99924 * 9 8 7 12 12 C 1.53783 * 87.08159 * 139.97749 * 11 9 8 13 13 H 1.08996 * 113.61719 * 89.19711 * 12 11 9 14 14 N 1.46503 * 113.61154 * 220.01646 * 12 11 9 15 15 C 1.34434 * 126.81881 * 85.00128 * 14 12 11 16 16 N 1.30834 * 108.07141 * 180.02562 * 15 14 12 17 17 C 1.33236 * 109.83163 * 0.02562 * 16 15 14 18 18 N 1.30706 * 108.94932 * 359.97438 * 17 16 15 19 19 C 1.53781 * 87.08234 * 334.56409 * 12 11 9 20 20 C 1.41503 * 106.96598 * 359.59621 * 4 3 2 21 21 C 1.35034 * 124.88848 * 179.67678 * 2 1 3 22 22 C 1.50707 * 126.38070 * 0.05575 * 21 2 1 23 23 O 1.42894 * 109.47233 * 30.00098 * 22 21 2 24 24 Si 1.86305 * 109.46905 * 150.00006 * 22 21 2 25 25 H 1.08999 * 109.47106 * 270.32603 * 1 2 3 26 26 H 1.09003 * 109.47064 * 30.32568 * 1 2 3 27 27 H 1.08998 * 109.46929 * 150.32759 * 1 2 3 28 28 H 0.97005 * 119.99813 * 359.97438 * 7 5 4 29 29 H 1.08996 * 109.47338 * 59.99725 * 8 7 5 30 30 H 1.09006 * 109.46614 * 299.99711 * 8 7 5 31 31 H 1.09000 * 113.61703 * 25.42951 * 11 9 8 32 32 H 1.09005 * 113.61124 * 254.52548 * 11 9 8 33 33 H 1.07990 * 125.96348 * 359.77278 * 15 14 12 34 34 H 1.08009 * 125.52824 * 179.97438 * 17 16 15 35 35 H 1.09001 * 113.61505 * 139.97852 * 19 12 11 36 36 H 1.08999 * 113.61748 * 270.89137 * 19 12 11 37 37 H 1.07996 * 127.24646 * 180.26131 * 20 4 3 38 38 H 1.09000 * 109.46814 * 269.99727 * 22 21 2 39 39 H 0.96703 * 114.00121 * 60.00048 * 23 22 21 40 40 H 1.48502 * 109.99684 * 179.97438 * 24 22 21 41 41 H 1.48495 * 109.99896 * 301.31655 * 24 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.1998 1.0539 0.0000 4 6 3.4741 0.7169 -0.0029 5 6 4.6273 1.6399 -0.0067 6 8 5.7597 1.1977 -0.0034 7 7 4.4241 2.9722 -0.0140 8 6 5.5679 3.8876 -0.0183 9 6 5.0647 5.3325 -0.0257 10 1 4.2407 5.4973 0.6685 11 6 6.1877 6.3765 0.0921 12 6 5.4144 7.2098 -0.9434 13 1 4.6863 7.8897 -0.5011 14 7 6.2756 7.8633 -1.9321 15 6 6.7484 7.3253 -3.0697 16 7 7.4775 8.2284 -3.6735 17 6 7.4942 9.3502 -2.9548 18 7 6.7722 9.1760 -1.8793 19 6 4.8045 5.8869 -1.4363 20 6 3.5272 -0.6971 0.0047 21 6 2.2374 -1.1076 0.0062 22 6 1.7534 -2.5349 0.0131 23 8 0.4961 -2.6147 -0.6611 24 14 2.9953 -3.6158 -0.8587 25 1 -0.3633 0.0058 1.0276 26 1 -0.3633 0.8871 -0.5189 27 1 -0.3633 -0.8929 -0.5087 28 1 3.5205 3.3250 -0.0170 29 1 6.1731 3.7088 -0.9070 30 1 6.1722 3.7182 0.8729 31 1 7.1536 6.0211 -0.2668 32 1 6.2464 6.8456 1.0743 33 1 6.5625 6.3214 -3.4216 34 1 8.0191 10.2566 -3.2183 35 1 3.7465 5.9609 -1.6881 36 1 5.3923 5.3977 -2.2130 37 1 4.4109 -1.3180 0.0087 38 1 1.6360 -2.8737 1.0424 39 1 0.5258 -2.3280 -1.5842 40 1 2.5300 -5.0261 -0.8582 41 1 3.1882 -3.1446 -2.2536 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_17567722_13259642.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 16:58:50 Heat of formation + Delta-G solvation = 142.452346 kcal Electronic energy + Delta-G solvation = -25739.221989 eV Core-core repulsion = 21854.087300 eV Total energy + Delta-G solvation = -3885.134688 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 319.143 amu Computer time = 0.88 seconds Orbital eigenvalues (eV) -43.82733 -43.13259 -40.82777 -39.83820 -38.24435 -35.79196 -34.39843 -33.46936 -32.61747 -32.17484 -29.58438 -28.15408 -26.94167 -26.70323 -25.28333 -23.83195 -22.96508 -22.31508 -22.19862 -21.12794 -20.31628 -19.22309 -18.36065 -17.57924 -17.51262 -17.20742 -17.07075 -16.87496 -16.32513 -16.17268 -15.95112 -15.86075 -15.65699 -15.14774 -15.01621 -14.77109 -14.55756 -14.11468 -13.73376 -13.60930 -13.53005 -13.39650 -13.34796 -12.87755 -12.63280 -12.26268 -12.23963 -11.99299 -11.80228 -11.69031 -11.27483 -11.04449 -11.00627 -10.85530 -10.56834 -10.32212 -10.00147 -9.95000 -4.88064 0.45800 0.62370 0.83158 1.22589 1.35235 1.56509 1.68631 1.95113 1.95779 2.12939 2.32855 3.03811 3.09866 3.28780 3.35454 3.36137 3.43750 3.56053 3.65071 3.85952 4.03480 4.14363 4.18385 4.30892 4.32716 4.35750 4.44833 4.51431 4.58082 4.62116 4.67123 4.71110 4.74551 4.78910 4.86742 4.94674 5.14124 5.27167 5.34347 5.41888 5.44246 5.68153 5.87959 6.25120 6.39506 6.83215 7.08298 7.13615 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.064 3.936 2 N -0.265 5.265 3 N -0.264 5.264 4 C -0.040 4.040 5 C 0.603 3.397 6 O -0.567 6.567 7 N -0.705 5.705 8 C 0.132 3.868 9 C -0.101 4.101 10 H 0.125 0.875 11 C -0.132 4.132 12 C 0.122 3.878 13 H 0.131 0.869 14 N -0.369 5.369 15 C 0.255 3.745 16 N -0.581 5.581 17 C 0.188 3.812 18 N -0.353 5.353 19 C -0.130 4.130 20 C -0.187 4.187 21 C -0.014 4.014 22 C -0.044 4.044 23 O -0.536 6.536 24 Si 0.783 3.217 25 H 0.092 0.908 26 H 0.103 0.897 27 H 0.129 0.871 28 H 0.416 0.584 29 H 0.071 0.929 30 H 0.067 0.933 31 H 0.087 0.913 32 H 0.089 0.911 33 H 0.249 0.751 34 H 0.236 0.764 35 H 0.104 0.896 36 H 0.103 0.897 37 H 0.181 0.819 38 H 0.145 0.855 39 H 0.390 0.610 40 H -0.285 1.285 41 H -0.292 1.292 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.191 -3.001 1.893 7.135 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.075 4.075 2 N -0.054 5.054 3 N -0.102 5.102 4 C -0.198 4.198 5 C 0.388 3.612 6 O -0.444 6.444 7 N -0.357 5.357 8 C 0.008 3.992 9 C -0.120 4.120 10 H 0.143 0.857 11 C -0.171 4.171 12 C 0.020 3.980 13 H 0.149 0.851 14 N -0.159 5.159 15 C -0.041 4.041 16 N -0.309 5.309 17 C -0.114 4.114 18 N -0.181 5.181 19 C -0.169 4.169 20 C -0.215 4.215 21 C -0.140 4.140 22 C -0.154 4.154 23 O -0.344 6.344 24 Si 0.686 3.314 25 H 0.111 0.889 26 H 0.122 0.878 27 H 0.147 0.853 28 H 0.253 0.747 29 H 0.089 0.911 30 H 0.086 0.914 31 H 0.105 0.895 32 H 0.107 0.893 33 H 0.265 0.735 34 H 0.252 0.748 35 H 0.123 0.877 36 H 0.122 0.878 37 H 0.198 0.802 38 H 0.162 0.838 39 H 0.241 0.759 40 H -0.212 1.212 41 H -0.219 1.219 Dipole moment (debyes) X Y Z Total from point charges -6.276 -2.618 2.107 7.119 hybrid contribution -0.682 0.059 -0.636 0.934 sum -6.958 -2.559 1.472 7.558 Atomic orbital electron populations 1.22877 0.70878 1.07647 1.06054 1.45694 1.08932 1.01912 1.48857 1.73447 1.02680 1.14760 1.19291 1.21833 0.90929 0.94482 1.12551 1.17010 0.86245 0.82215 0.75759 1.90804 1.23853 1.77841 1.51903 1.45737 1.11422 1.04611 1.73890 1.21403 0.87942 0.87129 1.02691 1.22498 0.99628 0.91729 0.98168 0.85689 1.23415 0.98409 0.95379 0.99918 1.23343 0.92361 0.93283 0.88984 0.85108 1.50764 1.37631 1.08851 1.18644 1.26595 0.91806 1.01162 0.84537 1.70581 1.24593 1.02113 1.33580 1.26531 0.97375 0.98876 0.88653 1.77987 1.18677 0.97239 1.24181 1.23605 1.03729 0.91731 0.97807 1.21726 0.97376 0.93671 1.08753 1.22119 0.91031 0.92065 1.08749 1.24853 0.93244 0.92238 1.05096 1.86558 1.29576 1.88369 1.29933 0.93178 0.83919 0.74691 0.79583 0.88938 0.87795 0.85301 0.74682 0.91055 0.91432 0.89469 0.89271 0.73536 0.74795 0.87740 0.87843 0.80158 0.83805 0.75950 1.21176 1.21886 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.50 11.00 127.77 1.41 0.90 16 2 N -0.26 0.33 3.70 -355.92 -1.32 -0.99 16 3 N -0.26 -0.53 11.67 -48.17 -0.56 -1.09 16 4 C -0.04 -0.17 7.13 42.46 0.30 0.13 16 5 C 0.60 3.28 7.82 86.75 0.68 3.96 16 6 O -0.57 -6.91 16.93 -3.95 -0.07 -6.98 16 7 N -0.70 1.29 5.55 -466.10 -2.59 -1.30 16 8 C 0.13 -0.58 5.51 86.38 0.48 -0.10 16 9 C -0.10 0.98 3.76 -10.27 -0.04 0.94 16 10 H 0.13 -1.54 8.14 -2.39 -0.02 -1.56 16 11 C -0.13 0.88 7.44 31.12 0.23 1.11 16 12 C 0.12 -0.65 5.07 45.52 0.23 -0.42 16 13 H 0.13 -0.79 8.14 -2.39 -0.02 -0.81 16 14 N -0.37 -0.66 3.83 -328.93 -1.26 -1.92 16 15 C 0.26 0.33 11.87 180.36 2.14 2.47 16 16 N -0.58 -4.32 11.19 -204.01 -2.28 -6.60 16 17 C 0.19 1.21 13.03 180.77 2.36 3.57 16 18 N -0.35 -2.72 12.70 -61.25 -0.78 -3.50 16 19 C -0.13 1.34 7.00 31.12 0.22 1.55 16 20 C -0.19 -0.30 9.35 22.41 0.21 -0.09 16 21 C -0.01 0.02 6.18 41.40 0.26 0.28 16 22 C -0.04 0.26 2.99 71.24 0.21 0.47 16 23 O -0.54 3.24 10.02 -148.98 -1.49 1.74 16 24 Si 0.78 -3.73 31.23 68.60 2.14 -1.59 16 25 H 0.09 -0.82 8.14 -2.39 -0.02 -0.84 16 26 H 0.10 -1.02 8.14 -2.39 -0.02 -1.04 16 27 H 0.13 -1.33 5.01 -2.39 -0.01 -1.34 16 28 H 0.42 -2.28 8.20 -92.70 -0.76 -3.04 16 29 H 0.07 -0.23 7.84 -2.39 -0.02 -0.25 16 30 H 0.07 -0.12 8.14 -2.38 -0.02 -0.14 16 31 H 0.09 -0.39 8.10 -2.39 -0.02 -0.41 16 32 H 0.09 -0.58 8.14 -2.38 -0.02 -0.60 16 33 H 0.25 -1.85 6.75 -2.92 -0.02 -1.87 16 34 H 0.24 0.01 8.06 -2.91 -0.02 -0.01 16 35 H 0.10 -1.28 8.14 -2.39 -0.02 -1.30 16 36 H 0.10 -1.15 6.14 -2.39 -0.01 -1.16 16 37 H 0.18 -0.27 7.02 -2.91 -0.02 -0.29 16 38 H 0.14 -1.19 7.96 -2.39 -0.02 -1.21 16 39 H 0.39 -4.23 8.39 -74.06 -0.62 -4.85 16 40 H -0.29 -0.37 7.11 99.48 0.71 0.34 16 41 H -0.29 -0.44 7.11 99.48 0.71 0.27 16 Total: 0.00 -27.78 349.64 0.22 -27.56 By element: Atomic # 1 Polarization: -19.85 SS G_CDS: -0.25 Total: -20.10 kcal Atomic # 6 Polarization: 6.09 SS G_CDS: 8.68 Total: 14.77 kcal Atomic # 7 Polarization: -6.62 SS G_CDS: -8.79 Total: -15.41 kcal Atomic # 8 Polarization: -3.67 SS G_CDS: -1.56 Total: -5.23 kcal Atomic # 14 Polarization: -3.73 SS G_CDS: 2.14 Total: -1.59 kcal Total: -27.78 0.22 -27.56 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_17567722_13259642.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 170.008 kcal (2) G-P(sol) polarization free energy of solvation -27.780 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 142.228 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.224 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.555 kcal (6) G-S(sol) free energy of system = (1) + (5) 142.452 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.88 seconds