Wall clock time and date at job start Thu Mar 4 2021 12:30:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46496 * 1 3 3 N 1.28475 * 124.88819 * 2 1 4 4 C 1.31809 * 110.07403 * 180.02562 * 3 2 1 5 5 C 1.47711 * 126.51717 * 179.97438 * 4 3 2 6 6 O 1.21566 * 119.99877 * 180.02562 * 5 4 3 7 7 N 1.34779 * 119.99811 * 0.02562 * 5 4 3 8 8 C 1.46502 * 119.99822 * 180.02562 * 7 5 4 9 9 C 1.52997 * 109.47004 * 180.02562 * 8 7 5 10 10 F 1.39905 * 109.47157 * 304.99849 * 9 8 7 11 11 C 1.52997 * 109.47232 * 64.99858 * 9 8 7 12 12 C 1.52997 * 109.47232 * 179.97438 * 11 9 8 13 13 C 1.53002 * 109.47143 * 300.00043 * 12 11 9 14 14 H 1.09002 * 109.47593 * 300.00023 * 13 12 11 15 15 C 1.53002 * 109.47454 * 179.97438 * 13 12 11 16 16 O 1.42897 * 109.47108 * 64.99736 * 15 13 12 17 17 C 1.53000 * 109.46911 * 60.00192 * 13 12 11 18 18 C 1.53001 * 109.46886 * 299.99531 * 17 13 12 19 19 C 1.41503 * 106.96456 * 0.22337 * 4 3 2 20 20 C 1.35036 * 124.88341 * 180.02562 * 2 1 3 21 21 C 1.50698 * 126.38681 * 0.03244 * 20 2 1 22 22 O 1.42902 * 109.46979 * 329.99709 * 21 20 2 23 23 Si 1.86304 * 109.47166 * 210.00284 * 21 20 2 24 24 H 1.08996 * 109.47297 * 89.97466 * 1 2 3 25 25 H 1.08997 * 109.46933 * 209.98063 * 1 2 3 26 26 H 1.09001 * 109.46665 * 329.97106 * 1 2 3 27 27 H 0.96993 * 120.00013 * 0.02562 * 7 5 4 28 28 H 1.09001 * 109.46951 * 59.99578 * 8 7 5 29 29 H 1.09004 * 109.46938 * 300.00113 * 8 7 5 30 30 H 1.09001 * 109.47375 * 299.99867 * 11 9 8 31 31 H 1.09002 * 109.47045 * 59.99942 * 11 9 8 32 32 H 1.09000 * 109.47611 * 180.02562 * 12 11 9 33 33 H 1.09002 * 109.47153 * 60.00008 * 12 11 9 34 34 H 1.08998 * 109.47254 * 185.00083 * 15 13 12 35 35 H 1.09000 * 109.46791 * 304.99977 * 15 13 12 36 36 H 0.96697 * 113.99790 * 180.02562 * 16 15 13 37 37 H 1.09001 * 109.47194 * 180.02562 * 17 13 12 38 38 H 1.08992 * 109.47852 * 59.99752 * 17 13 12 39 39 H 1.08992 * 109.47514 * 300.00434 * 18 17 13 40 40 H 1.09004 * 109.47086 * 180.02562 * 18 17 13 41 41 H 1.07996 * 127.24948 * 179.75926 * 19 4 3 42 42 H 1.08992 * 109.47558 * 89.99795 * 21 20 2 43 43 H 0.96704 * 114.00056 * 300.00240 * 22 21 20 44 44 H 1.48504 * 109.99794 * 179.97438 * 23 21 20 45 45 H 1.48504 * 109.99664 * 301.31238 * 23 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.1998 1.0538 0.0000 4 6 3.4741 0.7168 -0.0006 5 6 4.6274 1.6397 -0.0013 6 8 5.7597 1.1975 -0.0022 7 7 4.4242 2.9721 -0.0009 8 6 5.5680 3.8875 -0.0022 9 6 5.0649 5.3324 -0.0008 10 9 4.1955 5.5245 -1.0799 11 6 4.3234 5.6130 1.3078 12 6 3.8208 7.0580 1.3094 13 6 5.0104 8.0119 1.1827 14 1 5.6877 7.8618 2.0235 15 6 4.5078 9.4570 1.1837 16 8 3.9175 9.7551 2.4505 17 6 5.7519 7.7313 -0.1259 18 6 6.2545 6.2862 -0.1275 19 6 3.5272 -0.6972 -0.0062 20 6 2.2372 -1.1077 -0.0005 21 6 1.7533 -2.5349 -0.0018 22 8 0.4951 -2.6118 0.6712 23 14 2.9941 -3.6122 0.8762 24 1 -0.3634 0.0005 -1.0276 25 1 -0.3633 -0.8901 0.5135 26 1 -0.3633 0.8898 0.5143 27 1 3.5207 3.3249 0.0002 28 1 6.1717 3.7134 -0.8929 29 1 6.1738 3.7132 0.8871 30 1 3.4761 4.9332 1.3983 31 1 5.0008 5.4633 2.1485 32 1 3.2929 7.2581 2.2418 33 1 3.1436 7.2082 0.4686 34 1 5.3442 10.1327 1.0046 35 1 3.7637 9.5834 0.3973 36 1 3.5759 10.6569 2.5227 37 1 6.5996 8.4105 -0.2160 38 1 5.0747 7.8814 -0.9667 39 1 6.9317 6.1361 0.7132 40 1 6.7831 6.0864 -1.0596 41 1 4.4108 -1.3181 -0.0118 42 1 1.6371 -2.8782 -1.0297 43 1 0.5237 -2.3211 1.5931 44 1 2.5281 -5.0222 0.8823 45 1 4.3152 -3.5162 0.2047 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_17664722_13259642.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 12:30:01 Heat of formation + Delta-G solvation = -95.854006 kcal Electronic energy + Delta-G solvation = -28658.618759 eV Core-core repulsion = 24400.432699 eV Total energy + Delta-G solvation = -4258.186059 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 328.163 amu Computer time = 1.20 seconds Orbital eigenvalues (eV) -48.84070 -43.89290 -40.64373 -39.54674 -38.12132 -37.37886 -35.94405 -34.44983 -32.95994 -32.36208 -31.95359 -29.14850 -27.99089 -26.70995 -25.18617 -24.22551 -23.54511 -22.26227 -21.83134 -21.08451 -20.67346 -19.28203 -18.25705 -17.76371 -17.60826 -17.41735 -17.23922 -16.99450 -16.46654 -16.13189 -16.10651 -15.84341 -15.73325 -15.56599 -15.45719 -15.10224 -14.74508 -14.56928 -14.27592 -14.02469 -13.96923 -13.71141 -13.53713 -13.45756 -13.19197 -12.99704 -12.70455 -12.60654 -12.36869 -12.23142 -12.08688 -11.87425 -11.56986 -11.51129 -11.17843 -11.10771 -10.87790 -10.81329 -10.44015 -10.11218 -10.00122 -4.97034 0.37531 0.76824 1.16589 1.53055 1.70143 1.94107 2.01576 2.21797 3.10471 3.15469 3.28022 3.29288 3.30104 3.41565 3.54399 3.58870 3.92545 3.97168 4.03670 4.21734 4.28140 4.29264 4.31758 4.36801 4.39577 4.42516 4.46710 4.54182 4.55994 4.58590 4.62942 4.66182 4.77310 4.82314 4.93294 4.99299 5.00540 5.10169 5.13726 5.18845 5.24701 5.32033 5.45517 5.64319 6.22539 6.51754 6.75278 6.88142 6.99218 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.062 3.938 2 N -0.257 5.257 3 N -0.264 5.264 4 C -0.039 4.039 5 C 0.605 3.395 6 O -0.565 6.565 7 N -0.706 5.706 8 C 0.099 3.901 9 C 0.117 3.883 10 F -0.214 7.214 11 C -0.136 4.136 12 C -0.107 4.107 13 C -0.089 4.089 14 H 0.078 0.922 15 C 0.077 3.923 16 O -0.594 6.594 17 C -0.110 4.110 18 C -0.135 4.135 19 C -0.196 4.196 20 C -0.006 4.006 21 C -0.036 4.036 22 O -0.541 6.541 23 Si 0.793 3.207 24 H 0.088 0.912 25 H 0.140 0.860 26 H 0.105 0.895 27 H 0.413 0.587 28 H 0.076 0.924 29 H 0.098 0.902 30 H 0.073 0.927 31 H 0.094 0.906 32 H 0.067 0.933 33 H 0.058 0.942 34 H 0.057 0.943 35 H 0.048 0.952 36 H 0.395 0.605 37 H 0.085 0.915 38 H 0.063 0.937 39 H 0.101 0.899 40 H 0.084 0.916 41 H 0.162 0.838 42 H 0.127 0.873 43 H 0.400 0.600 44 H -0.280 1.280 45 H -0.291 1.291 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.776 1.991 3.258 5.370 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 N -0.047 5.047 3 N -0.102 5.102 4 C -0.197 4.197 5 C 0.391 3.609 6 O -0.443 6.443 7 N -0.358 5.358 8 C -0.025 4.025 9 C 0.098 3.902 10 F -0.195 7.195 11 C -0.174 4.174 12 C -0.145 4.145 13 C -0.107 4.107 14 H 0.097 0.903 15 C -0.001 4.001 16 O -0.402 6.402 17 C -0.148 4.148 18 C -0.173 4.173 19 C -0.224 4.224 20 C -0.131 4.131 21 C -0.147 4.147 22 O -0.349 6.349 23 Si 0.696 3.304 24 H 0.106 0.894 25 H 0.158 0.842 26 H 0.123 0.877 27 H 0.250 0.750 28 H 0.094 0.906 29 H 0.116 0.884 30 H 0.091 0.909 31 H 0.113 0.887 32 H 0.086 0.914 33 H 0.076 0.924 34 H 0.075 0.925 35 H 0.066 0.934 36 H 0.245 0.755 37 H 0.104 0.896 38 H 0.082 0.918 39 H 0.120 0.880 40 H 0.103 0.897 41 H 0.180 0.820 42 H 0.145 0.855 43 H 0.251 0.749 44 H -0.206 1.206 45 H -0.218 1.218 Dipole moment (debyes) X Y Z Total from point charges -3.334 1.139 2.713 4.447 hybrid contribution -0.259 0.472 -1.102 1.227 sum -3.594 1.610 1.611 4.255 Atomic orbital electron populations 1.22973 0.70391 1.08267 1.05980 1.45747 1.09072 1.01613 1.48221 1.73494 1.02602 1.14936 1.19168 1.21698 0.90927 0.94210 1.12827 1.17016 0.86499 0.81833 0.75594 1.90788 1.23820 1.77721 1.51941 1.45668 1.11142 1.04887 1.74122 1.22097 0.88813 0.87100 1.04491 1.21260 0.90044 0.94071 0.84778 1.92843 1.72158 1.96243 1.58250 1.22137 1.01212 0.97973 0.96092 1.21440 0.97610 0.93157 1.02275 1.21194 0.97237 0.93560 0.98740 0.90327 1.22267 0.96789 0.96019 0.84996 1.86419 1.80620 1.37584 1.35614 1.21457 1.00623 0.95970 0.96733 1.22077 0.95992 0.94019 1.05196 1.21627 0.97391 0.93587 1.09775 1.22126 0.90564 0.92329 1.08124 1.24857 0.94575 0.91982 1.03243 1.86450 1.29008 1.88621 1.30838 0.93136 0.73349 0.75432 0.88474 0.89374 0.84216 0.87667 0.74965 0.90608 0.88420 0.90851 0.88696 0.91383 0.92360 0.92499 0.93415 0.75504 0.89599 0.91789 0.88001 0.89698 0.82006 0.85542 0.74850 1.20645 1.21791 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.41 11.00 127.77 1.41 0.99 16 2 N -0.26 -0.24 3.70 -355.94 -1.32 -1.56 16 3 N -0.26 -1.52 11.67 -48.17 -0.56 -2.09 16 4 C -0.04 -0.33 7.13 42.46 0.30 -0.03 16 5 C 0.61 6.39 7.82 86.75 0.68 7.07 16 6 O -0.57 -9.36 16.93 -3.92 -0.07 -9.43 16 7 N -0.71 -3.68 5.17 -466.10 -2.41 -6.09 16 8 C 0.10 0.21 4.84 86.38 0.42 0.63 16 9 C 0.12 -0.03 0.84 -10.79 -0.01 -0.04 16 10 F -0.21 -1.00 15.42 44.97 0.69 -0.31 16 11 C -0.14 0.17 4.87 30.59 0.15 0.31 16 12 C -0.11 -0.02 4.98 30.59 0.15 0.13 16 13 C -0.09 0.12 2.43 -10.79 -0.03 0.10 16 14 H 0.08 -0.06 8.14 -2.39 -0.02 -0.08 16 15 C 0.08 -0.13 6.43 71.98 0.46 0.34 16 16 O -0.59 -0.43 13.19 -148.98 -1.97 -2.40 16 17 C -0.11 0.33 5.08 30.59 0.16 0.49 16 18 C -0.13 0.43 5.00 30.60 0.15 0.59 16 19 C -0.20 -1.17 9.35 22.41 0.21 -0.96 16 20 C -0.01 0.00 6.17 41.40 0.26 0.25 16 21 C -0.04 0.15 2.99 71.24 0.21 0.36 16 22 O -0.54 4.03 10.02 -148.98 -1.49 2.54 16 23 Si 0.79 -2.99 31.38 68.60 2.15 -0.84 16 24 H 0.09 -0.60 8.14 -2.39 -0.02 -0.62 16 25 H 0.14 -1.48 5.00 -2.39 -0.01 -1.50 16 26 H 0.10 -0.89 8.14 -2.39 -0.02 -0.91 16 27 H 0.41 1.48 7.18 -92.71 -0.67 0.81 16 28 H 0.08 0.29 8.14 -2.39 -0.02 0.27 16 29 H 0.10 0.07 8.14 -2.39 -0.02 0.05 16 30 H 0.07 -0.05 7.18 -2.39 -0.02 -0.07 16 31 H 0.09 -0.28 8.14 -2.39 -0.02 -0.30 16 32 H 0.07 0.15 7.82 -2.39 -0.02 0.13 16 33 H 0.06 0.12 7.80 -2.39 -0.02 0.10 16 34 H 0.06 -0.22 8.14 -2.39 -0.02 -0.24 16 35 H 0.05 -0.10 8.14 -2.39 -0.02 -0.12 16 36 H 0.40 -2.87 9.12 -74.06 -0.68 -3.55 16 37 H 0.09 -0.45 8.14 -2.39 -0.02 -0.47 16 38 H 0.06 -0.06 7.80 -2.39 -0.02 -0.08 16 39 H 0.10 -0.60 8.14 -2.39 -0.02 -0.62 16 40 H 0.08 -0.29 8.14 -2.38 -0.02 -0.31 16 41 H 0.16 0.97 6.85 -2.91 -0.02 0.95 16 42 H 0.13 -0.50 7.96 -2.39 -0.02 -0.52 16 43 H 0.40 -5.99 8.39 -74.05 -0.62 -6.61 16 44 H -0.28 -0.45 7.11 99.48 0.71 0.25 16 45 H -0.29 -0.95 6.83 99.48 0.68 -0.27 16 Total: 0.00 -22.28 365.04 -1.36 -23.64 By element: Atomic # 1 Polarization: -12.79 SS G_CDS: -0.91 Total: -13.70 kcal Atomic # 6 Polarization: 5.71 SS G_CDS: 4.52 Total: 10.24 kcal Atomic # 7 Polarization: -5.45 SS G_CDS: -4.29 Total: -9.73 kcal Atomic # 8 Polarization: -5.76 SS G_CDS: -3.53 Total: -9.29 kcal Atomic # 9 Polarization: -1.00 SS G_CDS: 0.69 Total: -0.31 kcal Atomic # 14 Polarization: -2.99 SS G_CDS: 2.15 Total: -0.84 kcal Total: -22.28 -1.36 -23.64 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_17664722_13259642.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -72.218 kcal (2) G-P(sol) polarization free energy of solvation -22.276 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -94.494 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.360 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.636 kcal (6) G-S(sol) free energy of system = (1) + (5) -95.854 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.20 seconds