Wall clock time and date at job start Thu Mar 4 2021 14:32:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17402 * 1 3 3 C 1.47192 * 179.97438 * 2 1 4 4 H 1.09000 * 109.47355 * 231.67832 * 3 2 1 5 5 C 1.52993 * 109.47251 * 351.68365 * 3 2 1 6 6 C 1.52997 * 109.47196 * 59.99840 * 5 3 2 7 7 C 1.52998 * 109.47139 * 60.00006 * 6 5 3 8 8 H 1.09006 * 109.47141 * 60.00245 * 7 6 5 9 9 N 1.46503 * 109.47135 * 179.97438 * 7 6 5 10 10 C 1.34770 * 120.00336 * 275.00455 * 9 7 6 11 11 O 1.21564 * 120.00334 * 359.97438 * 10 9 7 12 12 C 1.47720 * 119.99783 * 180.02562 * 10 9 7 13 13 N 1.31800 * 126.51739 * 359.97438 * 12 10 9 14 14 N 1.28469 * 110.07090 * 179.72598 * 13 12 10 15 15 C 1.46505 * 124.88408 * 180.30821 * 14 13 12 16 16 C 1.35033 * 110.23172 * 0.45153 * 14 13 12 17 17 C 1.50699 * 126.38738 * 179.81373 * 16 14 13 18 18 O 1.42898 * 109.46964 * 329.71883 * 17 16 14 19 19 Si 1.86301 * 109.47146 * 209.71801 * 17 16 14 20 20 C 1.35367 * 107.22710 * 359.55855 * 16 14 13 21 21 C 1.52995 * 109.47439 * 300.00136 * 7 6 5 22 22 C 1.52997 * 109.47066 * 59.99819 * 21 7 6 23 23 H 4.18738 * 15.03935 * 0.02562 * 4 2 1 24 24 H 1.09006 * 109.46806 * 179.97438 * 5 3 2 25 25 H 1.08999 * 109.47306 * 299.99573 * 5 3 2 26 26 H 1.08998 * 109.47192 * 299.99514 * 6 5 3 27 27 H 1.08998 * 109.47040 * 179.97438 * 6 5 3 28 28 H 0.97005 * 119.99491 * 95.00369 * 9 7 6 29 29 H 1.09004 * 109.46510 * 270.16603 * 15 14 13 30 30 H 1.08991 * 109.47411 * 30.17166 * 15 14 13 31 31 H 1.08999 * 109.46926 * 150.17207 * 15 14 13 32 32 H 1.09002 * 109.46959 * 89.71853 * 17 16 14 33 33 H 0.96708 * 113.99549 * 180.02562 * 18 17 16 34 34 H 1.48498 * 110.00005 * 60.00183 * 19 17 16 35 35 H 1.48501 * 110.00049 * 181.31845 * 19 17 16 36 36 H 1.07995 * 127.25144 * 180.23811 * 20 16 14 37 37 H 1.08999 * 109.47673 * 180.02562 * 21 7 6 38 38 H 1.09006 * 109.46569 * 299.99931 * 21 7 6 39 39 H 1.08992 * 109.47456 * 60.00489 * 22 21 7 40 40 H 1.08998 * 109.47040 * 180.02562 * 22 21 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6459 0.0007 0.0000 4 1 3.0090 0.6380 0.8062 5 6 3.1566 -1.4264 0.2086 6 6 2.6470 -2.3210 -0.9231 7 6 3.1567 -1.7878 -2.2635 8 1 4.2468 -1.7873 -2.2636 9 7 2.6692 -2.6448 -3.3472 10 6 3.3469 -3.7610 -3.6803 11 8 4.3630 -4.0567 -3.0820 12 6 2.8556 -4.6248 -4.7734 13 7 1.7761 -4.4281 -5.5035 14 7 1.6505 -5.3704 -6.3676 15 6 0.5670 -5.4686 -7.3488 16 6 2.6590 -6.2591 -6.2392 17 6 2.8643 -7.5037 -7.0637 18 8 1.5964 -8.0098 -7.4859 19 14 3.7366 -8.7913 -6.0380 20 6 3.4545 -5.8206 -5.2355 21 6 2.6461 -0.3607 -2.4722 22 6 3.1557 0.5339 -1.3405 23 1 -1.0500 -0.0008 -0.0002 24 1 4.2467 -1.4259 0.2082 25 1 2.7935 -1.8062 1.1636 26 1 1.5570 -2.3216 -0.9230 27 1 3.0112 -3.3375 -0.7747 28 1 1.8586 -2.4087 -3.8249 29 1 -0.2618 -6.0316 -6.9196 30 1 0.2271 -4.4682 -7.6161 31 1 0.9299 -5.9794 -8.2407 32 1 3.4695 -7.2645 -7.9382 33 1 1.6521 -8.8126 -8.0222 34 1 2.9216 -9.1261 -4.8427 35 1 3.9734 -10.0122 -6.8495 36 1 4.3561 -6.2856 -4.8652 37 1 3.0088 0.0190 -3.4274 38 1 1.5560 -0.3613 -2.4722 39 1 4.2456 0.5344 -1.3405 40 1 2.7916 1.5504 -1.4890 There are 53 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 53 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_17761044_13259642.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 14:32:40 Heat of formation + Delta-G solvation = 61.747865 kcal Electronic energy + Delta-G solvation = -22938.919824 eV Core-core repulsion = 19530.327019 eV Total energy + Delta-G solvation = -3408.592805 eV No. of doubly occupied orbitals = 53 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 290.142 amu Computer time = 0.70 seconds Orbital eigenvalues (eV) -43.83290 -41.05518 -39.41423 -38.06570 -35.77929 -34.46134 -33.21146 -32.68321 -31.83845 -30.44233 -28.39571 -26.75724 -24.89156 -23.73347 -23.25662 -22.11169 -21.67108 -20.72175 -18.75608 -18.54244 -18.15444 -17.50417 -17.44823 -17.33158 -16.37702 -16.10073 -15.82845 -15.49118 -15.33606 -15.16152 -14.88025 -14.65974 -14.08334 -13.94206 -13.81731 -13.61574 -13.36763 -13.21536 -13.03186 -12.89921 -12.43094 -12.30753 -12.20391 -11.87270 -11.76170 -11.52966 -11.31922 -11.03746 -10.93962 -10.84371 -10.28715 -10.01159 -9.88740 -4.89844 0.42813 0.80034 1.25802 1.52411 1.63935 1.93586 1.96454 1.97334 2.09173 2.29375 2.98353 3.26065 3.44160 3.52684 3.68291 3.78554 3.98038 4.03683 4.12291 4.21517 4.27815 4.36486 4.38590 4.44618 4.45598 4.50017 4.52023 4.63386 4.65683 4.70763 4.87126 5.04858 5.05992 5.13096 5.15438 5.16075 5.24159 5.31346 5.38138 5.47888 5.67187 6.36759 6.49794 6.75370 6.80831 7.10256 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.227 4.227 2 C -0.191 4.191 3 C 0.015 3.985 4 H 0.108 0.892 5 C -0.105 4.105 6 C -0.125 4.125 7 C 0.148 3.852 8 H 0.084 0.916 9 N -0.706 5.706 10 C 0.605 3.395 11 O -0.561 6.561 12 C -0.040 4.040 13 N -0.270 5.270 14 N -0.265 5.265 15 C 0.088 3.912 16 C 0.025 3.975 17 C -0.046 4.046 18 O -0.554 6.554 19 Si 0.774 3.226 20 C -0.192 4.192 21 C -0.121 4.121 22 C -0.104 4.104 23 H 0.232 0.768 24 H 0.087 0.913 25 H 0.068 0.932 26 H 0.058 0.942 27 H 0.050 0.950 28 H 0.411 0.589 29 H 0.087 0.913 30 H 0.102 0.898 31 H 0.118 0.882 32 H 0.118 0.882 33 H 0.406 0.594 34 H -0.313 1.313 35 H -0.264 1.264 36 H 0.184 0.816 37 H 0.079 0.921 38 H 0.065 0.935 39 H 0.091 0.909 40 H 0.079 0.921 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.273 0.173 -4.978 4.989 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.243 4.243 2 C -0.191 4.191 3 C -0.003 4.003 4 H 0.126 0.874 5 C -0.143 4.143 6 C -0.164 4.164 7 C 0.044 3.956 8 H 0.102 0.898 9 N -0.357 5.357 10 C 0.391 3.609 11 O -0.439 6.439 12 C -0.198 4.198 13 N -0.108 5.108 14 N -0.054 5.054 15 C -0.051 4.051 16 C -0.100 4.100 17 C -0.156 4.156 18 O -0.365 6.365 19 Si 0.677 3.323 20 C -0.219 4.219 21 C -0.159 4.159 22 C -0.142 4.142 23 H 0.248 0.752 24 H 0.106 0.894 25 H 0.087 0.913 26 H 0.076 0.924 27 H 0.069 0.931 28 H 0.247 0.753 29 H 0.106 0.894 30 H 0.120 0.880 31 H 0.137 0.863 32 H 0.136 0.864 33 H 0.259 0.741 34 H -0.241 1.241 35 H -0.189 1.189 36 H 0.201 0.799 37 H 0.097 0.903 38 H 0.084 0.916 39 H 0.109 0.891 40 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges -0.785 0.411 -4.152 4.245 hybrid contribution -1.128 -1.009 -0.706 1.670 sum -1.914 -0.598 -4.858 5.255 Atomic orbital electron populations 1.25543 0.96860 1.00859 1.01050 1.23430 0.95006 1.00355 1.00262 1.18528 0.84105 0.97825 0.99800 0.87404 1.21509 1.01779 0.93056 0.97941 1.21864 1.00686 0.99142 0.94704 1.21081 0.99602 0.89573 0.85319 0.89801 1.45916 1.29096 1.23840 1.36810 1.17002 0.82680 0.80316 0.80943 1.90771 1.25762 1.72979 1.54343 1.21843 0.96504 0.99806 1.01632 1.73449 1.19553 1.14355 1.03437 1.45681 1.20583 1.14613 1.24547 1.22472 0.87188 1.05319 0.90105 1.21204 0.92264 0.95432 1.01117 1.24429 0.91117 0.96508 1.03589 1.86465 1.27451 1.48333 1.74290 0.93391 0.86746 0.76070 0.76055 1.21646 1.04031 0.97514 0.98746 1.21769 1.01366 0.92643 1.00079 1.21521 1.02013 0.98997 0.91662 0.75160 0.89412 0.91317 0.92375 0.93100 0.75285 0.89424 0.87959 0.86330 0.86413 0.74118 1.24099 1.18906 0.79868 0.90254 0.91588 0.89081 0.90234 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.23 -0.64 19.25 74.32 1.43 0.79 16 2 C -0.19 -0.64 10.06 31.12 0.31 -0.33 16 3 C 0.02 -0.01 3.07 -12.60 -0.04 -0.05 16 4 H 0.11 -0.32 8.14 -2.39 -0.02 -0.34 16 5 C -0.10 -0.08 5.43 30.59 0.17 0.09 16 6 C -0.13 -0.56 5.27 30.59 0.16 -0.40 16 7 C 0.15 0.52 2.45 44.99 0.11 0.63 16 8 H 0.08 0.47 7.58 -2.38 -0.02 0.45 16 9 N -0.71 -4.00 5.07 -445.54 -2.26 -6.27 16 10 C 0.61 6.56 7.79 86.75 0.68 7.24 16 11 O -0.56 -9.05 16.59 -3.92 -0.06 -9.11 16 12 C -0.04 -0.38 7.13 42.46 0.30 -0.07 16 13 N -0.27 -2.10 11.67 -48.17 -0.56 -2.66 16 14 N -0.27 -1.11 3.70 -355.92 -1.32 -2.43 16 15 C 0.09 -0.27 10.12 127.77 1.29 1.02 16 16 C 0.03 0.08 6.21 41.40 0.26 0.33 16 17 C -0.05 0.19 2.86 71.24 0.20 0.39 16 18 O -0.55 2.70 10.40 -148.98 -1.55 1.15 16 19 Si 0.77 -2.36 31.23 68.60 2.14 -0.22 16 20 C -0.19 -1.15 9.35 22.41 0.21 -0.94 16 21 C -0.12 0.05 5.17 30.59 0.16 0.21 16 22 C -0.10 0.25 5.43 30.60 0.17 0.42 16 23 H 0.23 -0.61 7.80 -4.42 -0.03 -0.65 16 24 H 0.09 -0.10 8.14 -2.38 -0.02 -0.12 16 25 H 0.07 0.08 8.14 -2.39 -0.02 0.06 16 26 H 0.06 0.35 7.23 -2.39 -0.02 0.33 16 27 H 0.05 0.43 8.14 -2.39 -0.02 0.41 16 28 H 0.41 1.31 8.33 -92.70 -0.77 0.54 16 29 H 0.09 -0.28 8.14 -2.38 -0.02 -0.30 16 30 H 0.10 -0.55 8.14 -2.39 -0.02 -0.57 16 31 H 0.12 -0.77 6.78 -2.39 -0.02 -0.78 16 32 H 0.12 -1.12 7.96 -2.39 -0.02 -1.14 16 33 H 0.41 -5.33 8.74 -74.05 -0.65 -5.97 16 34 H -0.31 -2.33 7.11 99.48 0.71 -1.62 16 35 H -0.26 0.35 7.11 99.48 0.71 1.06 16 36 H 0.18 0.37 7.03 -2.91 -0.02 0.35 16 37 H 0.08 -0.13 8.14 -2.39 -0.02 -0.14 16 38 H 0.07 0.06 7.23 -2.38 -0.02 0.04 16 39 H 0.09 -0.42 8.14 -2.39 -0.02 -0.44 16 40 H 0.08 -0.25 8.14 -2.39 -0.02 -0.27 16 Total: 0.00 -20.77 334.42 1.48 -19.29 By element: Atomic # 1 Polarization: -8.78 SS G_CDS: -0.32 Total: -9.11 kcal Atomic # 6 Polarization: 3.94 SS G_CDS: 5.41 Total: 9.35 kcal Atomic # 7 Polarization: -7.21 SS G_CDS: -4.14 Total: -11.35 kcal Atomic # 8 Polarization: -6.35 SS G_CDS: -1.61 Total: -7.96 kcal Atomic # 14 Polarization: -2.36 SS G_CDS: 2.14 Total: -0.22 kcal Total: -20.77 1.48 -19.29 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_17761044_13259642.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 81.041 kcal (2) G-P(sol) polarization free energy of solvation -20.769 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 60.272 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.476 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.293 kcal (6) G-S(sol) free energy of system = (1) + (5) 61.748 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.70 seconds