Wall clock time and date at job start Thu Mar 4 2021 14:34:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 N 1.28504 * 125.01490 * 2 1 4 4 C 1.32574 * 110.04583 * 180.02562 * 3 2 1 5 5 C 1.47911 * 126.41106 * 179.97438 * 4 3 2 6 6 O 1.21966 * 120.00075 * 180.02562 * 5 4 3 7 7 N 1.32905 * 120.00288 * 0.02562 * 5 4 3 8 8 S 1.49345 * 120.00298 * 180.02562 * 7 5 4 9 9 C 1.81398 * 107.52259 * 64.89192 * 8 7 5 10 10 O 1.42101 * 107.24178 * 302.44632 * 8 7 5 11 11 C 1.81401 * 107.52304 * 179.97438 * 8 7 5 12 12 H 1.09001 * 112.90772 * 195.91353 * 11 8 7 13 13 C 1.53782 * 113.61207 * 327.16009 * 11 8 7 14 14 C 1.53962 * 87.11063 * 89.18669 * 13 11 8 15 15 H 1.08993 * 113.61598 * 270.84305 * 14 13 11 16 16 C 1.50700 * 113.66521 * 139.88647 * 14 13 11 17 17 O 1.20822 * 120.00365 * 262.55162 * 16 14 13 18 18 O 1.34233 * 120.00053 * 82.55365 * 16 14 13 19 19 C 1.45192 * 117.00369 * 179.97438 * 18 16 14 20 20 C 1.53005 * 109.46984 * 60.00106 * 19 18 16 21 21 C 1.53003 * 109.47327 * 180.02562 * 19 18 16 22 22 C 1.53000 * 109.47137 * 300.00283 * 19 18 16 23 23 C 1.53781 * 113.61464 * 64.65810 * 11 8 7 24 24 C 1.41047 * 107.18213 * 0.26007 * 4 3 2 25 25 C 1.35637 * 105.65853 * 359.58285 * 24 4 3 26 26 C 1.50701 * 126.42901 * 180.18078 * 25 24 4 27 27 O 1.42907 * 109.47010 * 150.27998 * 26 25 24 28 28 Si 1.86299 * 109.47270 * 30.27978 * 26 25 24 29 29 H 1.09003 * 109.47179 * 89.97561 * 1 2 3 30 30 H 1.08991 * 109.47116 * 209.98096 * 1 2 3 31 31 H 1.09008 * 109.47225 * 329.97865 * 1 2 3 32 32 H 1.09005 * 109.46932 * 181.53239 * 9 8 7 33 33 H 1.08996 * 109.47543 * 301.53320 * 9 8 7 34 34 H 1.09001 * 109.47498 * 61.54226 * 9 8 7 35 35 H 1.08997 * 113.61668 * 203.66220 * 13 11 8 36 36 H 1.08998 * 113.61674 * 334.48729 * 13 11 8 37 37 H 1.09001 * 109.47131 * 60.00097 * 20 19 18 38 38 H 1.08997 * 109.47305 * 179.97438 * 20 19 18 39 39 H 1.09000 * 109.47306 * 299.99869 * 20 19 18 40 40 H 1.08995 * 109.46824 * 59.99745 * 21 19 18 41 41 H 1.08997 * 109.47348 * 180.02562 * 21 19 18 42 42 H 1.09005 * 109.46699 * 300.00272 * 21 19 18 43 43 H 1.09000 * 109.47273 * 60.00057 * 22 19 18 44 44 H 1.09004 * 109.46884 * 180.02562 * 22 19 18 45 45 H 1.08999 * 109.47015 * 299.99660 * 22 19 18 46 46 H 1.09002 * 113.61445 * 25.43536 * 23 11 8 47 47 H 1.09002 * 113.61408 * 156.25267 * 23 11 8 48 48 H 1.07998 * 127.17249 * 179.70599 * 24 4 3 49 49 H 1.08999 * 109.46820 * 270.27565 * 26 25 24 50 50 H 0.96696 * 114.00037 * 299.99396 * 27 26 25 51 51 H 1.48498 * 109.99923 * 58.68223 * 28 26 25 52 52 H 1.48494 * 109.99898 * 180.02562 * 28 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.2023 1.0525 0.0000 4 6 3.4831 0.7100 -0.0006 5 6 4.6387 1.6332 -0.0013 6 8 5.7745 1.1886 -0.0022 7 7 4.4396 2.9472 -0.0009 8 16 5.6064 3.8794 -0.0022 9 6 6.4894 3.6470 -1.5696 10 8 6.3914 3.5733 1.1421 11 6 4.9535 5.5718 -0.0020 12 1 5.7014 6.3151 -0.2782 13 6 3.6265 5.7202 -0.7649 14 6 2.9171 5.3916 0.5614 15 1 2.7518 4.3254 0.7157 16 6 1.6816 6.2185 0.8076 17 8 1.7417 7.2006 1.5088 18 8 0.5142 5.8640 0.2479 19 6 -0.6344 6.7065 0.5290 20 6 -0.3570 8.1281 0.0358 21 6 -1.8646 6.1480 -0.1891 22 6 -0.8921 6.7311 2.0369 23 6 4.1703 5.9298 1.2721 24 6 3.5376 -0.6994 -0.0071 25 6 2.2467 -1.1157 -0.0005 26 6 1.7671 -2.5443 0.0002 27 8 0.5099 -2.6244 0.6750 28 14 3.0123 -3.6170 0.8775 29 1 -0.3634 0.0004 -1.0277 30 1 -0.3633 -0.8901 0.5135 31 1 -0.3634 0.8898 0.5142 32 1 7.3656 4.2950 -1.5926 33 1 6.8040 2.6072 -1.6588 34 1 5.8292 3.8993 -2.3995 35 1 3.4379 6.7333 -1.1201 36 1 3.4811 4.9664 -1.5388 37 1 -0.1734 8.1106 -1.0385 38 1 -1.2194 8.7605 0.2463 39 1 0.5192 8.5258 0.5477 40 1 -2.0620 5.1354 0.1626 41 1 -2.7268 6.7807 0.0215 42 1 -1.6812 6.1301 -1.2635 43 1 -0.0159 7.1288 2.5489 44 1 -1.7547 7.3633 2.2478 45 1 -1.0898 5.7184 2.3883 46 1 4.4632 5.3444 2.1437 47 1 4.1316 7.0001 1.4746 48 1 4.4227 -1.3182 -0.0136 49 1 1.6505 -2.8889 -1.0273 50 1 0.5388 -2.3328 1.5964 51 1 3.2038 -3.1378 2.2700 52 1 2.5512 -5.0285 0.8845 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_17831164_13259642.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 14:34:17 Heat of formation + Delta-G solvation = -25.092438 kcal Electronic energy + Delta-G solvation = -37756.242945 eV Core-core repulsion = 32854.839656 eV Total energy + Delta-G solvation = -4901.403289 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 400.159 amu Computer time = 1.72 seconds Orbital eigenvalues (eV) -43.52591 -42.12837 -40.47846 -39.92488 -38.19072 -37.72740 -37.55869 -35.04070 -34.44618 -34.23786 -32.42279 -30.53755 -28.74940 -28.61650 -28.40914 -28.32152 -27.03435 -26.73364 -24.81602 -23.98134 -22.19126 -21.80041 -21.05384 -20.42129 -19.10691 -18.94180 -18.44155 -17.75239 -17.54866 -17.50872 -17.40211 -17.14334 -17.00107 -16.83768 -16.29657 -16.02721 -15.92408 -15.61967 -15.44601 -15.31780 -15.03457 -14.82433 -14.62303 -14.42733 -14.10181 -14.07743 -13.92057 -13.71392 -13.66189 -13.53118 -13.39755 -13.34871 -13.18270 -13.08018 -12.94881 -12.88010 -12.58596 -12.52937 -12.26226 -12.17299 -12.09620 -11.90003 -11.88623 -11.78087 -11.41243 -11.40012 -11.04101 -10.94578 -10.91488 -10.69055 -10.02740 -9.84900 -4.89313 -1.74564 0.46887 0.83410 1.12785 1.26848 1.38207 1.61818 1.67028 1.70261 1.82759 1.97275 2.29142 2.54279 2.89296 3.07209 3.22372 3.31978 3.37383 3.49518 3.59125 3.72132 3.77385 3.91439 3.93081 3.99768 4.02703 4.11145 4.32562 4.36077 4.37263 4.42152 4.48196 4.51489 4.54856 4.56607 4.57753 4.65225 4.71968 4.73463 4.73931 4.76817 4.80229 4.85046 4.85362 4.90731 5.05960 5.10842 5.22447 5.26688 5.29700 5.42247 5.55434 5.78200 6.26135 6.74554 6.79356 7.10818 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.069 3.931 2 N -0.273 5.273 3 N -0.236 5.236 4 C -0.022 4.022 5 C 0.631 3.369 6 O -0.602 6.602 7 N -1.118 6.118 8 S 2.285 3.715 9 C -0.603 4.603 10 O -0.981 6.981 11 C -0.469 4.469 12 H 0.219 0.781 13 C -0.067 4.067 14 C -0.139 4.139 15 H 0.147 0.853 16 C 0.479 3.521 17 O -0.523 6.523 18 O -0.351 6.351 19 C 0.107 3.893 20 C -0.179 4.179 21 C -0.138 4.138 22 C -0.183 4.183 23 C -0.091 4.091 24 C -0.191 4.191 25 C -0.024 4.024 26 C -0.040 4.040 27 O -0.535 6.535 28 Si 0.780 3.220 29 H 0.094 0.906 30 H 0.128 0.872 31 H 0.097 0.903 32 H 0.163 0.837 33 H 0.125 0.875 34 H 0.173 0.827 35 H 0.138 0.862 36 H 0.121 0.879 37 H 0.069 0.931 38 H 0.083 0.917 39 H 0.066 0.934 40 H 0.065 0.935 41 H 0.093 0.907 42 H 0.071 0.929 43 H 0.063 0.937 44 H 0.085 0.915 45 H 0.058 0.942 46 H 0.080 0.920 47 H 0.138 0.862 48 H 0.180 0.820 49 H 0.147 0.853 50 H 0.389 0.611 51 H -0.299 1.299 52 H -0.279 1.279 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.027 4.102 -7.813 9.329 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 N -0.063 5.063 3 N -0.074 5.074 4 C -0.182 4.182 5 C 0.418 3.582 6 O -0.484 6.484 7 N -1.024 6.024 8 S 2.488 3.512 9 C -0.761 4.761 10 O -0.967 6.967 11 C -0.588 4.588 12 H 0.236 0.764 13 C -0.105 4.105 14 C -0.158 4.158 15 H 0.165 0.835 16 C 0.323 3.677 17 O -0.413 6.413 18 O -0.268 6.268 19 C 0.071 3.929 20 C -0.236 4.236 21 C -0.195 4.195 22 C -0.240 4.240 23 C -0.129 4.129 24 C -0.219 4.219 25 C -0.148 4.148 26 C -0.150 4.150 27 O -0.343 6.343 28 Si 0.683 3.317 29 H 0.113 0.887 30 H 0.146 0.854 31 H 0.116 0.884 32 H 0.181 0.819 33 H 0.143 0.857 34 H 0.191 0.809 35 H 0.156 0.844 36 H 0.139 0.861 37 H 0.088 0.912 38 H 0.102 0.898 39 H 0.085 0.915 40 H 0.084 0.916 41 H 0.112 0.888 42 H 0.090 0.910 43 H 0.082 0.918 44 H 0.104 0.896 45 H 0.077 0.923 46 H 0.098 0.902 47 H 0.156 0.844 48 H 0.197 0.803 49 H 0.164 0.836 50 H 0.239 0.761 51 H -0.226 1.226 52 H -0.205 1.205 Dipole moment (debyes) X Y Z Total from point charges -3.443 4.291 -6.752 8.710 hybrid contribution 0.042 -0.235 0.883 0.915 sum -3.401 4.056 -5.869 7.903 Atomic orbital electron populations 1.22780 0.71009 1.07145 1.05989 1.46210 1.08900 1.02148 1.49072 1.73944 1.02767 1.13416 1.17224 1.21519 0.90922 0.93126 1.12646 1.16561 0.85888 0.83664 0.72092 1.90956 1.24073 1.80700 1.52632 1.70335 1.49107 1.15028 1.67895 1.13076 0.74459 0.82777 0.80879 1.29862 1.15574 1.13191 1.17430 1.93521 1.73149 1.81864 1.48187 1.30359 1.09903 1.10506 1.08027 0.76415 1.22793 0.85967 1.07080 0.94690 1.23181 0.88981 1.02697 1.00964 0.83506 1.23549 0.84960 0.83375 0.75819 1.90581 1.86092 1.27811 1.36771 1.86594 1.18009 1.54485 1.67670 1.22432 0.84126 0.90400 0.95920 1.22455 1.04112 0.94987 1.02066 1.21870 0.94422 1.02225 1.01020 1.22479 1.03722 1.02896 0.94877 1.22824 0.90646 1.05575 0.93898 1.21707 0.97440 0.93731 1.08989 1.22461 0.90728 0.92000 1.09599 1.24816 0.93154 0.92001 1.05053 1.86541 1.29679 1.88116 1.30014 0.93237 0.84002 0.74907 0.79536 0.88713 0.85432 0.88449 0.81871 0.85674 0.80876 0.84447 0.86064 0.91195 0.89841 0.91483 0.91590 0.88842 0.90954 0.91806 0.89578 0.92278 0.90179 0.84441 0.80302 0.83579 0.76119 1.22604 1.20519 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 -0.20 11.03 127.77 1.41 1.21 16 2 N -0.27 -1.31 3.74 -354.80 -1.33 -2.63 16 3 N -0.24 -2.40 12.01 -47.94 -0.58 -2.98 16 4 C -0.02 -0.28 7.15 42.28 0.30 0.03 16 5 C 0.63 8.77 7.39 87.10 0.64 9.42 16 6 O -0.60 -11.10 14.96 10.46 0.16 -10.94 16 7 N -1.12 -7.53 7.82 -178.02 -1.39 -8.92 16 8 S 2.28 0.57 3.83 -56.49 -0.22 0.35 16 9 C -0.60 4.59 10.55 113.37 1.20 5.78 16 10 O -0.98 -13.09 17.29 -133.32 -2.30 -15.39 16 11 C -0.47 4.66 4.65 31.12 0.14 4.80 16 12 H 0.22 -4.44 8.14 -2.39 -0.02 -4.46 16 13 C -0.07 0.66 6.99 31.18 0.22 0.88 16 14 C -0.14 0.15 3.83 -10.95 -0.04 0.11 16 15 H 0.15 0.42 6.56 -2.39 -0.02 0.41 16 16 C 0.48 1.60 6.80 71.24 0.48 2.08 16 17 O -0.52 -3.60 11.40 21.98 0.25 -3.35 16 18 O -0.35 -1.31 9.89 -51.45 -0.51 -1.81 16 19 C 0.11 0.13 1.13 -10.79 -0.01 0.12 16 20 C -0.18 0.01 8.37 71.98 0.60 0.62 16 21 C -0.14 0.39 8.85 71.98 0.64 1.02 16 22 C -0.18 -0.45 8.37 71.98 0.60 0.16 16 23 C -0.09 0.31 7.01 31.12 0.22 0.52 16 24 C -0.19 -1.47 9.33 22.36 0.21 -1.27 16 25 C -0.02 -0.08 6.21 41.27 0.26 0.17 16 26 C -0.04 0.08 3.00 71.24 0.21 0.29 16 27 O -0.54 1.33 10.06 -148.98 -1.50 -0.17 16 28 Si 0.78 -0.87 31.25 68.60 2.14 1.27 16 29 H 0.09 -0.46 8.14 -2.39 -0.02 -0.48 16 30 H 0.13 -0.76 5.07 -2.39 -0.01 -0.77 16 31 H 0.10 -0.36 8.14 -2.38 -0.02 -0.38 16 32 H 0.16 -2.32 8.14 -2.39 -0.02 -2.34 16 33 H 0.12 -0.13 7.07 -2.39 -0.02 -0.15 16 34 H 0.17 -2.62 8.14 -2.39 -0.02 -2.64 16 35 H 0.14 -1.90 8.09 -2.39 -0.02 -1.92 16 36 H 0.12 -1.50 8.04 -2.39 -0.02 -1.52 16 37 H 0.07 -0.12 8.14 -2.39 -0.02 -0.14 16 38 H 0.08 -0.21 8.14 -2.39 -0.02 -0.23 16 39 H 0.07 0.24 5.89 -2.39 -0.01 0.23 16 40 H 0.07 -0.15 8.14 -2.39 -0.02 -0.17 16 41 H 0.09 -0.53 8.14 -2.39 -0.02 -0.55 16 42 H 0.07 -0.25 8.14 -2.38 -0.02 -0.27 16 43 H 0.06 0.43 5.89 -2.39 -0.01 0.42 16 44 H 0.09 -0.06 8.14 -2.38 -0.02 -0.08 16 45 H 0.06 0.16 8.14 -2.39 -0.02 0.14 16 46 H 0.08 0.03 8.10 -2.39 -0.02 0.01 16 47 H 0.14 -0.70 7.43 -2.39 -0.02 -0.71 16 48 H 0.18 0.71 7.04 -2.91 -0.02 0.69 16 49 H 0.15 -0.79 7.96 -2.39 -0.02 -0.81 16 50 H 0.39 -2.60 8.41 -74.06 -0.62 -3.22 16 51 H -0.30 -1.85 7.11 99.48 0.71 -1.14 16 52 H -0.28 -1.03 7.11 99.48 0.71 -0.33 16 Total: 0.00 -41.22 430.37 2.18 -39.04 By element: Atomic # 1 Polarization: -20.79 SS G_CDS: 0.37 Total: -20.42 kcal Atomic # 6 Polarization: 18.87 SS G_CDS: 7.08 Total: 25.95 kcal Atomic # 7 Polarization: -11.24 SS G_CDS: -3.29 Total: -14.53 kcal Atomic # 8 Polarization: -27.76 SS G_CDS: -3.91 Total: -31.67 kcal Atomic # 14 Polarization: -0.87 SS G_CDS: 2.14 Total: 1.27 kcal Atomic # 16 Polarization: 0.57 SS G_CDS: -0.22 Total: 0.35 kcal Total: -41.22 2.18 -39.04 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_17831164_13259642.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 13.945 kcal (2) G-P(sol) polarization free energy of solvation -41.220 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -27.275 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.182 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.037 kcal (6) G-S(sol) free energy of system = (1) + (5) -25.092 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.72 seconds