Wall clock time and date at job start Thu Mar 4 2021 14:55:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46506 * 1 3 3 N 1.28469 * 124.88096 * 2 1 4 4 C 1.31809 * 110.06976 * 179.97438 * 3 2 1 5 5 C 1.47704 * 126.51962 * 179.97438 * 4 3 2 6 6 O 1.21574 * 120.00428 * 180.02562 * 5 4 3 7 7 N 1.34782 * 119.99611 * 0.03195 * 5 4 3 8 8 C 1.46503 * 119.99635 * 179.97438 * 7 5 4 9 9 C 1.53003 * 109.46818 * 179.97438 * 8 7 5 10 10 H 1.09002 * 112.85017 * 45.33137 * 9 8 7 11 11 C 1.53786 * 113.61503 * 176.52755 * 9 8 7 12 12 C 1.53782 * 87.07909 * 89.19540 * 11 9 8 13 13 H 1.08994 * 113.62059 * 270.80464 * 12 11 9 14 14 S 1.81402 * 113.61129 * 139.98017 * 12 11 9 15 15 C 1.81403 * 101.92252 * 185.00446 * 14 12 11 16 16 O 1.42102 * 108.58159 * 299.49045 * 14 12 11 17 17 O 1.42100 * 108.57880 * 70.51492 * 14 12 11 18 18 C 1.53781 * 113.61337 * 274.13548 * 9 8 7 19 19 C 1.41506 * 106.96285 * 0.22656 * 4 3 2 20 20 C 1.35037 * 124.88477 * 179.97438 * 2 1 3 21 21 C 1.50705 * 126.38354 * 0.03479 * 20 2 1 22 22 O 1.42900 * 109.47187 * 329.99813 * 21 20 2 23 23 Si 1.86297 * 109.46691 * 210.00020 * 21 20 2 24 24 H 1.09001 * 109.47190 * 89.98014 * 1 2 3 25 25 H 1.09006 * 109.46977 * 209.97666 * 1 2 3 26 26 H 1.08997 * 109.47355 * 329.97759 * 1 2 3 27 27 H 0.96996 * 120.00351 * 359.97438 * 7 5 4 28 28 H 1.08997 * 109.47388 * 60.00196 * 8 7 5 29 29 H 1.09004 * 109.47244 * 299.99375 * 8 7 5 30 30 H 1.08993 * 113.61491 * 203.74909 * 11 9 8 31 31 H 1.09000 * 113.61395 * 334.56762 * 11 9 8 32 32 H 1.08992 * 109.47107 * 59.99928 * 15 14 12 33 33 H 1.08996 * 109.47486 * 180.02562 * 15 14 12 34 34 H 1.09008 * 109.47001 * 300.00120 * 15 14 12 35 35 H 1.09001 * 113.61695 * 25.34825 * 18 9 8 36 36 H 1.08997 * 113.61223 * 156.25408 * 18 9 8 37 37 H 1.08002 * 127.24606 * 179.75372 * 19 4 3 38 38 H 1.09001 * 109.47083 * 90.00384 * 21 20 2 39 39 H 0.96702 * 113.99996 * 300.00242 * 22 21 20 40 40 H 1.48498 * 110.00145 * 58.68166 * 23 21 20 41 41 H 1.48504 * 110.00089 * 180.02562 * 23 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4651 0.0000 0.0000 3 7 2.1997 1.0539 0.0000 4 6 3.4740 0.7169 0.0006 5 6 4.6273 1.6398 0.0002 6 8 5.7597 1.1977 0.0003 7 7 4.4240 2.9722 -0.0001 8 6 5.5679 3.8876 0.0001 9 6 5.0646 5.3325 -0.0010 10 1 4.2581 5.5004 0.7128 11 6 6.1902 6.3769 0.0845 12 6 6.2363 6.3377 -1.4521 13 1 6.9162 5.5841 -1.8495 14 16 6.4682 7.9675 -2.2139 15 6 6.3216 7.5800 -3.9800 16 8 5.3789 8.8006 -1.8414 17 8 7.7955 8.4038 -1.9548 18 6 4.7670 5.8801 -1.4068 19 6 3.5272 -0.6971 -0.0044 20 6 2.2374 -1.1077 0.0005 21 6 1.7534 -2.5349 0.0004 22 8 0.4952 -2.6113 0.6734 23 14 2.9942 -3.6113 0.8794 24 1 -0.3633 0.0004 -1.0277 25 1 -0.3633 -0.8902 0.5135 26 1 -0.3634 0.8897 0.5142 27 1 3.5205 3.3251 -0.0005 28 1 6.1729 3.7134 -0.8896 29 1 6.1723 3.7137 0.8904 30 1 5.8659 7.3364 0.4873 31 1 7.0974 6.0033 0.5595 32 1 5.3391 7.1514 -4.1776 33 1 6.4444 8.4923 -4.5636 34 1 7.0937 6.8632 -4.2600 35 1 4.5273 5.1056 -2.1354 36 1 4.0529 6.7035 -1.4125 37 1 4.4108 -1.3180 -0.0091 38 1 1.6373 -2.8792 -1.0273 39 1 0.5237 -2.3197 1.5950 40 1 3.1853 -3.1329 2.2721 41 1 2.5289 -5.0216 0.8857 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_17836384_13259642.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 14:55:44 Heat of formation + Delta-G solvation = -17.509713 kcal Electronic energy + Delta-G solvation = -25838.181636 eV Core-core repulsion = 21850.628348 eV Total energy + Delta-G solvation = -3987.553287 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 330.113 amu Computer time = 1.69 seconds Orbital eigenvalues (eV) -43.85650 -40.97836 -39.78520 -38.41647 -37.95491 -37.00797 -35.45498 -34.45321 -32.70918 -30.71574 -29.82555 -28.37130 -27.07788 -26.85880 -25.52546 -23.75618 -22.22422 -21.20266 -20.43701 -19.79589 -19.11982 -18.54328 -17.64923 -17.52648 -17.32425 -17.20738 -16.97390 -16.85190 -16.30074 -16.05870 -15.99960 -15.79450 -15.11609 -14.91834 -14.72219 -14.37777 -14.23998 -14.18948 -14.05261 -13.85774 -13.76523 -13.59003 -13.37309 -13.13559 -12.99776 -12.83985 -12.72580 -12.27630 -12.05474 -12.00593 -11.84687 -11.80518 -11.25919 -11.13804 -11.01139 -10.28046 -10.03558 -9.99474 -5.05848 -1.03632 0.49485 0.77966 1.11325 1.43737 1.56245 1.66853 1.84124 2.07515 2.43273 2.48406 2.75162 2.81222 3.08312 3.21621 3.24268 3.27567 3.39220 3.41289 3.77393 3.86467 3.90694 4.02094 4.03573 4.19206 4.21658 4.25440 4.35523 4.39213 4.39612 4.46072 4.59404 4.61656 4.64623 4.65280 4.71691 4.78470 5.03011 5.26274 5.37069 5.58144 5.94646 6.40476 6.82377 7.20460 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.070 3.930 2 N -0.264 5.264 3 N -0.257 5.257 4 C -0.018 4.018 5 C 0.607 3.393 6 O -0.528 6.528 7 N -0.719 5.719 8 C 0.135 3.865 9 C -0.114 4.114 10 H 0.097 0.903 11 C -0.097 4.097 12 C -0.608 4.608 13 H 0.154 0.846 14 S 2.423 3.577 15 C -0.655 4.655 16 O -0.936 6.936 17 O -0.939 6.939 18 C -0.112 4.112 19 C -0.170 4.170 20 C -0.020 4.020 21 C -0.049 4.049 22 O -0.530 6.530 23 Si 0.716 3.284 24 H 0.085 0.915 25 H 0.118 0.882 26 H 0.094 0.906 27 H 0.408 0.592 28 H 0.075 0.925 29 H 0.078 0.922 30 H 0.101 0.899 31 H 0.094 0.906 32 H 0.128 0.872 33 H 0.129 0.871 34 H 0.128 0.872 35 H 0.089 0.911 36 H 0.108 0.892 37 H 0.172 0.828 38 H 0.130 0.870 39 H 0.379 0.621 40 H -0.255 1.255 41 H -0.249 1.249 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.986 -3.546 -1.580 5.564 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 N -0.053 5.053 3 N -0.095 5.095 4 C -0.177 4.177 5 C 0.391 3.609 6 O -0.402 6.402 7 N -0.371 5.371 8 C 0.012 3.988 9 C -0.134 4.134 10 H 0.115 0.885 11 C -0.135 4.135 12 C -0.717 4.717 13 H 0.172 0.828 14 S 2.606 3.394 15 C -0.804 4.804 16 O -0.934 6.934 17 O -0.936 6.936 18 C -0.150 4.150 19 C -0.198 4.198 20 C -0.144 4.144 21 C -0.159 4.159 22 O -0.337 6.337 23 Si 0.614 3.386 24 H 0.104 0.896 25 H 0.136 0.864 26 H 0.112 0.888 27 H 0.243 0.757 28 H 0.093 0.907 29 H 0.096 0.904 30 H 0.120 0.880 31 H 0.113 0.887 32 H 0.147 0.853 33 H 0.148 0.852 34 H 0.147 0.853 35 H 0.107 0.893 36 H 0.127 0.873 37 H 0.189 0.811 38 H 0.147 0.853 39 H 0.228 0.772 40 H -0.179 1.179 41 H -0.173 1.173 Dipole moment (debyes) X Y Z Total from point charges -3.882 -2.863 -1.098 4.947 hybrid contribution -0.996 -0.646 -0.028 1.187 sum -4.878 -3.509 -1.126 6.113 Atomic orbital electron populations 1.22631 0.72530 1.06545 1.05260 1.45359 1.07974 1.02151 1.49812 1.73503 1.02901 1.14115 1.18940 1.21756 0.90697 0.93900 1.11308 1.16827 0.86622 0.81276 0.76133 1.90831 1.22479 1.77078 1.49782 1.45782 1.10643 1.05380 1.75329 1.21204 0.88224 0.86090 1.03277 1.22451 0.99329 0.93576 0.98029 0.88491 1.22588 1.00454 1.00658 0.89849 1.31806 1.07222 1.23336 1.09367 0.82780 1.07807 0.75320 0.77770 0.78547 1.30231 1.11699 1.12694 1.25796 1.93608 1.55453 1.62766 1.81527 1.93613 1.37166 1.79181 1.83602 1.22868 0.91322 1.02369 0.98463 1.21447 0.96324 0.93733 1.08293 1.21913 0.91387 0.91391 1.09735 1.24809 0.93314 0.93549 1.04258 1.86575 1.29704 1.88227 1.29168 0.94108 0.84822 0.77734 0.81942 0.89627 0.86447 0.88776 0.75652 0.90680 0.90358 0.88030 0.88726 0.85281 0.85236 0.85295 0.89254 0.87348 0.81057 0.85285 0.77186 1.17902 1.17346 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 28. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 -0.22 11.00 59.85 0.66 0.44 16 2 N -0.26 0.01 3.70 -63.84 -0.24 -0.23 16 3 N -0.26 -0.38 11.67 33.42 0.39 0.01 16 4 C -0.02 -0.04 7.13 -82.77 -0.59 -0.63 16 5 C 0.61 1.65 7.82 -12.39 -0.10 1.55 16 6 O -0.53 -2.97 16.93 5.30 0.09 -2.88 16 7 N -0.72 0.17 5.55 -61.29 -0.34 -0.17 16 8 C 0.14 -0.19 5.35 -4.04 -0.02 -0.21 16 9 C -0.11 0.35 3.93 -89.80 -0.35 -0.01 16 10 H 0.10 -0.35 8.14 -51.93 -0.42 -0.77 16 11 C -0.10 0.25 7.26 -25.92 -0.19 0.06 16 12 C -0.61 2.03 3.81 -25.82 -0.10 1.93 16 13 H 0.15 -0.81 7.70 -51.93 -0.40 -1.21 16 14 S 2.42 -2.71 5.30 -107.50 -0.57 -3.28 16 15 C -0.65 2.49 10.62 101.05 1.07 3.56 16 16 O -0.94 -2.21 17.35 -57.83 -1.00 -3.21 16 17 O -0.94 -3.07 18.10 -57.83 -1.05 -4.12 16 18 C -0.11 0.41 7.19 -25.82 -0.19 0.22 16 19 C -0.17 -0.14 9.35 -39.36 -0.37 -0.51 16 20 C -0.02 0.01 6.17 -82.21 -0.51 -0.50 16 21 C -0.05 0.12 2.99 36.01 0.11 0.22 16 22 O -0.53 1.22 10.02 -35.23 -0.35 0.87 16 23 Si 0.72 -1.70 31.24 -169.99 -5.31 -7.01 16 24 H 0.09 -0.31 8.14 -51.93 -0.42 -0.73 16 25 H 0.12 -0.49 5.00 -51.93 -0.26 -0.75 16 26 H 0.09 -0.37 8.14 -51.93 -0.42 -0.79 16 27 H 0.41 -0.67 8.20 -40.82 -0.33 -1.01 16 28 H 0.07 -0.10 7.38 -51.93 -0.38 -0.48 16 29 H 0.08 -0.05 8.14 -51.93 -0.42 -0.48 16 30 H 0.10 -0.27 8.10 -51.93 -0.42 -0.69 16 31 H 0.09 -0.29 8.10 -51.93 -0.42 -0.71 16 32 H 0.13 -0.70 8.14 -51.93 -0.42 -1.12 16 33 H 0.13 -0.48 8.14 -51.93 -0.42 -0.90 16 34 H 0.13 -0.68 8.14 -51.92 -0.42 -1.10 16 35 H 0.09 -0.40 8.10 -51.93 -0.42 -0.82 16 36 H 0.11 -0.40 7.49 -51.93 -0.39 -0.79 16 37 H 0.17 -0.16 7.04 -52.49 -0.37 -0.53 16 38 H 0.13 -0.42 7.96 -51.93 -0.41 -0.84 16 39 H 0.38 -1.80 8.39 45.56 0.38 -1.42 16 40 H -0.26 -0.10 7.11 56.52 0.40 0.30 16 41 H -0.25 -0.09 7.11 56.52 0.40 0.32 16 LS Contribution 357.17 15.07 5.38 5.38 Total: 0.00 -13.88 357.17 -9.15 -23.03 By element: Atomic # 1 Polarization: -8.95 SS G_CDS: -5.59 Total: -14.53 kcal Atomic # 6 Polarization: 6.71 SS G_CDS: -0.57 Total: 6.14 kcal Atomic # 7 Polarization: -0.21 SS G_CDS: -0.19 Total: -0.39 kcal Atomic # 8 Polarization: -7.03 SS G_CDS: -2.31 Total: -9.34 kcal Atomic # 14 Polarization: -1.70 SS G_CDS: -5.31 Total: -7.01 kcal Atomic # 16 Polarization: -2.71 SS G_CDS: -0.57 Total: -3.28 kcal Total LS contribution 5.38 Total: 5.38 kcal Total: -13.88 -9.15 -23.03 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_17836384_13259642.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 5.525 kcal (2) G-P(sol) polarization free energy of solvation -13.881 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -8.356 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.154 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.035 kcal (6) G-S(sol) free energy of system = (1) + (5) -17.510 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.69 seconds