Wall clock time and date at job start Thu Mar 4 2021 15:12:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46501 * 1 3 3 N 1.28473 * 124.88169 * 2 1 4 4 C 1.31805 * 110.07158 * 179.97438 * 3 2 1 5 5 C 1.47714 * 126.51835 * 179.97438 * 4 3 2 6 6 O 1.21567 * 120.00209 * 180.02562 * 5 4 3 7 7 N 1.34779 * 119.99879 * 0.02945 * 5 4 3 8 8 C 1.46499 * 119.99872 * 180.02562 * 7 5 4 9 9 C 1.53000 * 109.46840 * 180.02562 * 8 7 5 10 10 C 1.53001 * 109.46886 * 180.02562 * 9 8 7 11 11 H 1.08993 * 112.85258 * 43.79888 * 10 9 8 12 12 C 1.53782 * 113.61585 * 175.00132 * 10 9 8 13 13 C 1.53780 * 87.08566 * 139.97549 * 12 10 9 14 14 H 1.09004 * 113.61365 * 89.19606 * 13 12 10 15 15 O 1.42893 * 113.61764 * 220.01738 * 13 12 10 16 16 C 1.53787 * 113.61117 * 272.49572 * 10 9 8 17 17 C 1.41504 * 106.96419 * 0.22818 * 4 3 2 18 18 C 1.35025 * 124.88490 * 179.97438 * 2 1 3 19 19 C 1.50695 * 126.38980 * 0.04046 * 18 2 1 20 20 O 1.42899 * 109.46688 * 329.99584 * 19 18 2 21 21 Si 1.86303 * 109.47422 * 209.99879 * 19 18 2 22 22 H 1.09001 * 109.47193 * 90.02685 * 1 2 3 23 23 H 1.08994 * 109.47257 * 210.02148 * 1 2 3 24 24 H 1.09004 * 109.47262 * 330.02703 * 1 2 3 25 25 H 0.97000 * 119.99708 * 359.97438 * 7 5 4 26 26 H 1.09002 * 109.47391 * 59.99686 * 8 7 5 27 27 H 1.09001 * 109.46813 * 299.99742 * 8 7 5 28 28 H 1.09001 * 109.47194 * 299.99493 * 9 8 7 29 29 H 1.08992 * 109.47399 * 59.99666 * 9 8 7 30 30 H 1.09003 * 113.61406 * 254.52885 * 12 10 9 31 31 H 1.09000 * 113.61443 * 25.34143 * 12 10 9 32 32 H 0.96700 * 114.00415 * 179.97438 * 15 13 12 33 33 H 1.09002 * 113.61591 * 334.56363 * 16 10 9 34 34 H 1.08998 * 113.61477 * 105.46999 * 16 10 9 35 35 H 1.07995 * 127.24946 * 179.75187 * 17 4 3 36 36 H 1.09000 * 109.47742 * 89.99540 * 19 18 2 37 37 H 0.96709 * 113.99972 * 180.02562 * 20 19 18 38 38 H 1.48501 * 110.00084 * 59.99293 * 21 19 18 39 39 H 1.48495 * 110.00113 * 181.31351 * 21 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.1997 1.0539 0.0000 4 6 3.4740 0.7170 0.0006 5 6 4.6272 1.6400 0.0002 6 8 5.7597 1.1979 0.0003 7 7 4.4240 2.9724 -0.0002 8 6 5.5678 3.8878 -0.0011 9 6 5.0645 5.3326 -0.0007 10 6 6.2591 6.2887 -0.0023 11 1 7.0417 5.9871 -0.6983 12 6 5.8628 7.7695 -0.1248 13 6 6.9650 8.0685 0.9051 14 1 7.9414 8.2552 0.4579 15 8 6.5965 9.0591 1.8667 16 6 6.7800 6.6259 1.4048 17 6 3.5272 -0.6970 -0.0045 18 6 2.2373 -1.1076 0.0005 19 6 1.7535 -2.5348 0.0003 20 8 0.4952 -2.6112 0.6733 21 14 2.9942 -3.6113 0.8792 22 1 -0.3633 -0.0005 -1.0277 23 1 -0.3633 -0.8897 0.5141 24 1 -0.3634 0.8902 0.5134 25 1 3.5204 3.3251 -0.0006 26 1 6.1721 3.7133 -0.8913 27 1 6.1729 3.7139 0.8887 28 1 4.4592 5.5068 -0.8902 29 1 4.4605 5.5068 0.8897 30 1 6.0586 8.1939 -1.1096 31 1 4.8567 7.9836 0.2359 32 1 7.2856 9.2512 2.5174 33 1 6.0252 6.5276 2.1851 34 1 7.7163 6.1270 1.6550 35 1 4.4108 -1.3179 -0.0092 36 1 1.6373 -2.8790 -1.0274 37 1 0.1232 -3.5031 0.7117 38 1 3.1616 -3.1524 2.2816 39 1 2.5441 -5.0263 0.8582 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_17837616_13259642.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 15:12:34 Heat of formation + Delta-G solvation = -11.931911 kcal Electronic energy + Delta-G solvation = -21606.754875 eV Core-core repulsion = 18132.737165 eV Total energy + Delta-G solvation = -3474.017711 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 282.141 amu Computer time = 0.59 seconds Orbital eigenvalues (eV) -43.70671 -40.61297 -40.01290 -38.25812 -36.72352 -35.48091 -34.35283 -32.81285 -31.48024 -28.54959 -26.91513 -26.71924 -25.71824 -23.70380 -22.53692 -22.03517 -20.79991 -20.33584 -18.85050 -18.50898 -18.31143 -17.36886 -17.33135 -16.86325 -16.51048 -16.25277 -16.06340 -15.40221 -15.22385 -15.11572 -14.81706 -14.58915 -14.15673 -14.02495 -13.63129 -13.42170 -13.40584 -13.28036 -12.96918 -12.67589 -12.46032 -12.33347 -11.99407 -11.78107 -11.69401 -11.22736 -11.10453 -10.97842 -10.67873 -10.13164 -9.87745 -9.83571 -5.01742 0.61711 0.86233 1.25061 1.48243 1.62873 1.91305 2.24509 2.56530 2.76776 3.23605 3.35558 3.47982 3.51246 3.58902 3.76503 3.94212 4.01568 4.10376 4.12211 4.19589 4.28612 4.35379 4.40702 4.55096 4.56268 4.65225 4.69364 4.80101 4.80479 4.82462 4.93692 5.01221 5.11852 5.22826 5.38608 5.44326 5.52476 5.71957 6.09443 6.55296 6.72232 6.96483 7.34620 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.077 3.923 2 N -0.261 5.261 3 N -0.259 5.259 4 C -0.016 4.016 5 C 0.607 3.393 6 O -0.529 6.529 7 N -0.720 5.720 8 C 0.120 3.880 9 C -0.120 4.120 10 C -0.106 4.106 11 H 0.098 0.902 12 C -0.125 4.125 13 C 0.073 3.927 14 H 0.082 0.918 15 O -0.562 6.562 16 C -0.166 4.166 17 C -0.175 4.175 18 C 0.026 3.974 19 C -0.050 4.050 20 O -0.543 6.543 21 Si 0.712 3.288 22 H 0.081 0.919 23 H 0.121 0.879 24 H 0.092 0.908 25 H 0.407 0.593 26 H 0.071 0.929 27 H 0.071 0.929 28 H 0.074 0.926 29 H 0.073 0.927 30 H 0.074 0.926 31 H 0.091 0.909 32 H 0.379 0.621 33 H 0.090 0.910 34 H 0.071 0.929 35 H 0.173 0.827 36 H 0.088 0.912 37 H 0.388 0.612 38 H -0.251 1.251 39 H -0.254 1.254 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.070 -1.916 -1.657 3.271 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.063 4.063 2 N -0.050 5.050 3 N -0.097 5.097 4 C -0.175 4.175 5 C 0.391 3.609 6 O -0.404 6.404 7 N -0.372 5.372 8 C -0.003 4.003 9 C -0.157 4.157 10 C -0.125 4.125 11 H 0.116 0.884 12 C -0.162 4.162 13 C 0.014 3.986 14 H 0.100 0.900 15 O -0.367 6.367 16 C -0.204 4.204 17 C -0.203 4.203 18 C -0.099 4.099 19 C -0.160 4.160 20 O -0.352 6.352 21 Si 0.610 3.390 22 H 0.100 0.900 23 H 0.139 0.861 24 H 0.111 0.889 25 H 0.242 0.758 26 H 0.089 0.911 27 H 0.089 0.911 28 H 0.092 0.908 29 H 0.091 0.909 30 H 0.093 0.907 31 H 0.109 0.891 32 H 0.226 0.774 33 H 0.109 0.891 34 H 0.089 0.911 35 H 0.190 0.810 36 H 0.106 0.894 37 H 0.238 0.762 38 H -0.175 1.175 39 H -0.178 1.178 Dipole moment (debyes) X Y Z Total from point charges -2.399 -1.215 -1.271 2.974 hybrid contribution -0.741 -0.784 0.303 1.120 sum -3.140 -1.998 -0.968 3.846 Atomic orbital electron populations 1.22545 0.72532 1.06604 1.04586 1.45311 1.08047 1.02107 1.49491 1.73499 1.02918 1.14097 1.19143 1.21741 0.90742 0.93768 1.11254 1.16826 0.86563 0.81364 0.76138 1.90814 1.22489 1.77109 1.49940 1.45843 1.10752 1.05473 1.75172 1.21412 0.88328 0.87753 1.02813 1.21748 0.97945 0.92843 1.03204 1.22239 0.97994 0.94276 0.97986 0.88426 1.23122 0.99688 0.94783 0.98628 1.23355 0.98003 0.86730 0.90476 0.90025 1.86529 1.45178 1.60345 1.44657 1.23793 1.02223 0.97128 0.97268 1.21348 0.95984 0.93821 1.09098 1.20743 0.90938 0.89169 1.09000 1.24414 0.93345 0.96071 1.02128 1.86391 1.34391 1.34760 1.79639 0.94178 0.85911 0.76420 0.82505 0.90008 0.86111 0.88941 0.75813 0.91081 0.91091 0.90774 0.90865 0.90700 0.89061 0.77388 0.89129 0.91069 0.81015 0.89433 0.76199 1.17470 1.17836 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 -0.09 11.00 59.85 0.66 0.57 16 2 N -0.26 -0.55 3.70 -63.85 -0.24 -0.79 16 3 N -0.26 -0.89 11.67 33.42 0.39 -0.50 16 4 C -0.02 -0.06 7.13 -82.76 -0.59 -0.65 16 5 C 0.61 2.75 7.83 -12.39 -0.10 2.65 16 6 O -0.53 -3.83 16.93 5.31 0.09 -3.74 16 7 N -0.72 -1.28 5.55 -61.29 -0.34 -1.62 16 8 C 0.12 0.07 5.66 -4.04 -0.02 0.04 16 9 C -0.12 0.15 5.16 -26.73 -0.14 0.01 16 10 C -0.11 0.13 3.65 -89.80 -0.33 -0.20 16 11 H 0.10 -0.17 8.13 -51.93 -0.42 -0.59 16 12 C -0.12 0.04 7.47 -25.92 -0.19 -0.15 16 13 C 0.07 -0.01 5.21 -25.92 -0.14 -0.15 16 14 H 0.08 -0.11 8.14 -51.93 -0.42 -0.54 16 15 O -0.56 -0.69 13.67 -35.23 -0.48 -1.17 16 16 C -0.17 0.12 7.46 -25.91 -0.19 -0.07 16 17 C -0.17 -0.44 9.35 -39.36 -0.37 -0.81 16 18 C 0.03 0.04 6.21 -82.21 -0.51 -0.47 16 19 C -0.05 0.08 2.98 36.00 0.11 0.18 16 20 O -0.54 1.08 9.76 -35.23 -0.34 0.73 16 21 Si 0.71 -1.22 31.24 -169.99 -5.31 -6.53 16 22 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 23 H 0.12 -0.20 5.19 -51.93 -0.27 -0.47 16 24 H 0.09 -0.17 8.14 -51.93 -0.42 -0.60 16 25 H 0.41 0.15 8.20 -40.82 -0.33 -0.18 16 26 H 0.07 0.07 8.14 -51.93 -0.42 -0.35 16 27 H 0.07 0.10 8.14 -51.93 -0.42 -0.33 16 28 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 29 H 0.07 -0.08 7.84 -51.93 -0.41 -0.49 16 30 H 0.07 -0.06 8.14 -51.93 -0.42 -0.49 16 31 H 0.09 0.04 8.10 -51.93 -0.42 -0.38 16 32 H 0.38 -1.04 9.12 45.56 0.42 -0.63 16 33 H 0.09 0.01 7.90 -51.93 -0.41 -0.40 16 34 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 35 H 0.17 0.07 7.04 -52.49 -0.37 -0.30 16 36 H 0.09 -0.30 7.96 -51.93 -0.41 -0.72 16 37 H 0.39 -2.29 8.74 45.56 0.40 -1.90 16 38 H -0.25 -0.58 7.11 56.52 0.40 -0.18 16 39 H -0.25 0.11 7.11 56.52 0.40 0.51 16 LS Contribution 329.21 15.07 4.96 4.96 Total: 0.00 -9.49 329.21 -7.90 -17.39 By element: Atomic # 1 Polarization: -4.88 SS G_CDS: -4.81 Total: -9.69 kcal Atomic # 6 Polarization: 2.77 SS G_CDS: -1.81 Total: 0.96 kcal Atomic # 7 Polarization: -2.73 SS G_CDS: -0.19 Total: -2.91 kcal Atomic # 8 Polarization: -3.44 SS G_CDS: -0.74 Total: -4.18 kcal Atomic # 14 Polarization: -1.22 SS G_CDS: -5.31 Total: -6.53 kcal Total LS contribution 4.96 Total: 4.96 kcal Total: -9.49 -7.90 -17.39 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_17837616_13259642.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 5.458 kcal (2) G-P(sol) polarization free energy of solvation -9.494 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -4.036 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.896 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.390 kcal (6) G-S(sol) free energy of system = (1) + (5) -11.932 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds