Wall clock time and date at job start Thu Mar 4 2021 15:12:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46501 * 1 3 3 N 1.28473 * 124.88169 * 2 1 4 4 C 1.31805 * 110.07158 * 179.97438 * 3 2 1 5 5 C 1.47714 * 126.51835 * 179.97438 * 4 3 2 6 6 O 1.21567 * 120.00209 * 180.02562 * 5 4 3 7 7 N 1.34779 * 119.99879 * 0.02945 * 5 4 3 8 8 C 1.46499 * 119.99872 * 180.02562 * 7 5 4 9 9 C 1.53000 * 109.46840 * 180.02562 * 8 7 5 10 10 C 1.53001 * 109.46886 * 180.02562 * 9 8 7 11 11 H 1.08993 * 112.85258 * 43.79888 * 10 9 8 12 12 C 1.53782 * 113.61585 * 175.00132 * 10 9 8 13 13 C 1.53780 * 87.08566 * 139.97549 * 12 10 9 14 14 H 1.09004 * 113.61365 * 89.19606 * 13 12 10 15 15 O 1.42893 * 113.61764 * 220.01738 * 13 12 10 16 16 C 1.53787 * 113.61117 * 272.49572 * 10 9 8 17 17 C 1.41504 * 106.96419 * 0.22818 * 4 3 2 18 18 C 1.35025 * 124.88490 * 179.97438 * 2 1 3 19 19 C 1.50695 * 126.38980 * 0.04046 * 18 2 1 20 20 O 1.42899 * 109.46688 * 329.99584 * 19 18 2 21 21 Si 1.86303 * 109.47422 * 209.99879 * 19 18 2 22 22 H 1.09001 * 109.47193 * 90.02685 * 1 2 3 23 23 H 1.08994 * 109.47257 * 210.02148 * 1 2 3 24 24 H 1.09004 * 109.47262 * 330.02703 * 1 2 3 25 25 H 0.97000 * 119.99708 * 359.97438 * 7 5 4 26 26 H 1.09002 * 109.47391 * 59.99686 * 8 7 5 27 27 H 1.09001 * 109.46813 * 299.99742 * 8 7 5 28 28 H 1.09001 * 109.47194 * 299.99493 * 9 8 7 29 29 H 1.08992 * 109.47399 * 59.99666 * 9 8 7 30 30 H 1.09003 * 113.61406 * 254.52885 * 12 10 9 31 31 H 1.09000 * 113.61443 * 25.34143 * 12 10 9 32 32 H 0.96700 * 114.00415 * 179.97438 * 15 13 12 33 33 H 1.09002 * 113.61591 * 334.56363 * 16 10 9 34 34 H 1.08998 * 113.61477 * 105.46999 * 16 10 9 35 35 H 1.07995 * 127.24946 * 179.75187 * 17 4 3 36 36 H 1.09000 * 109.47742 * 89.99540 * 19 18 2 37 37 H 0.96709 * 113.99972 * 180.02562 * 20 19 18 38 38 H 1.48501 * 110.00084 * 59.99293 * 21 19 18 39 39 H 1.48495 * 110.00113 * 181.31351 * 21 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.1997 1.0539 0.0000 4 6 3.4740 0.7170 0.0006 5 6 4.6272 1.6400 0.0002 6 8 5.7597 1.1979 0.0003 7 7 4.4240 2.9724 -0.0002 8 6 5.5678 3.8878 -0.0011 9 6 5.0645 5.3326 -0.0007 10 6 6.2591 6.2887 -0.0023 11 1 7.0417 5.9871 -0.6983 12 6 5.8628 7.7695 -0.1248 13 6 6.9650 8.0685 0.9051 14 1 7.9414 8.2552 0.4579 15 8 6.5965 9.0591 1.8667 16 6 6.7800 6.6259 1.4048 17 6 3.5272 -0.6970 -0.0045 18 6 2.2373 -1.1076 0.0005 19 6 1.7535 -2.5348 0.0003 20 8 0.4952 -2.6112 0.6733 21 14 2.9942 -3.6113 0.8792 22 1 -0.3633 -0.0005 -1.0277 23 1 -0.3633 -0.8897 0.5141 24 1 -0.3634 0.8902 0.5134 25 1 3.5204 3.3251 -0.0006 26 1 6.1721 3.7133 -0.8913 27 1 6.1729 3.7139 0.8887 28 1 4.4592 5.5068 -0.8902 29 1 4.4605 5.5068 0.8897 30 1 6.0586 8.1939 -1.1096 31 1 4.8567 7.9836 0.2359 32 1 7.2856 9.2512 2.5174 33 1 6.0252 6.5276 2.1851 34 1 7.7163 6.1270 1.6550 35 1 4.4108 -1.3179 -0.0092 36 1 1.6373 -2.8790 -1.0274 37 1 0.1232 -3.5031 0.7117 38 1 3.1616 -3.1524 2.2816 39 1 2.5441 -5.0263 0.8582 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_17837616_13259642.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 15:12:34 Heat of formation + Delta-G solvation = -16.389800 kcal Electronic energy + Delta-G solvation = -21606.948184 eV Core-core repulsion = 18132.737165 eV Total energy + Delta-G solvation = -3474.211019 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 282.141 amu Computer time = 0.67 seconds Orbital eigenvalues (eV) -43.82794 -40.71589 -40.15904 -38.10439 -36.81959 -35.62151 -34.42988 -32.87353 -31.54939 -28.58357 -26.88781 -26.67466 -25.75561 -23.81438 -22.56917 -22.16596 -20.88949 -20.34878 -18.72608 -18.52992 -18.33938 -17.51745 -17.41469 -16.96328 -16.60182 -16.23524 -16.04306 -15.42643 -15.29433 -15.23528 -14.81800 -14.70792 -14.16980 -14.03912 -13.59675 -13.39300 -13.37486 -13.29994 -12.89029 -12.68939 -12.47824 -12.41014 -11.96310 -11.85645 -11.68885 -11.36053 -11.13009 -11.00592 -10.65979 -10.33960 -10.02494 -9.88079 -4.88665 0.42483 0.79844 1.26069 1.53878 1.65363 1.98039 2.10823 2.28976 2.93388 3.25361 3.34466 3.50978 3.53032 3.64644 3.80755 4.00094 4.01644 4.13998 4.27777 4.29864 4.36422 4.36990 4.40563 4.49428 4.62717 4.64990 4.70215 4.82513 4.83080 4.85893 4.95869 5.02639 5.13480 5.24737 5.27343 5.36511 5.51112 5.67706 6.35151 6.49683 6.81156 6.88614 7.09066 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.071 3.929 2 N -0.265 5.265 3 N -0.270 5.270 4 C -0.040 4.040 5 C 0.602 3.398 6 O -0.565 6.565 7 N -0.710 5.710 8 C 0.121 3.879 9 C -0.110 4.110 10 C -0.099 4.099 11 H 0.106 0.894 12 C -0.128 4.128 13 C 0.068 3.932 14 H 0.095 0.905 15 O -0.584 6.584 16 C -0.165 4.165 17 C -0.192 4.192 18 C 0.025 3.975 19 C -0.047 4.047 20 O -0.553 6.553 21 Si 0.776 3.224 22 H 0.097 0.903 23 H 0.128 0.872 24 H 0.097 0.903 25 H 0.414 0.586 26 H 0.068 0.932 27 H 0.062 0.938 28 H 0.082 0.918 29 H 0.072 0.928 30 H 0.080 0.920 31 H 0.081 0.919 32 H 0.393 0.607 33 H 0.080 0.920 34 H 0.075 0.925 35 H 0.185 0.815 36 H 0.117 0.883 37 H 0.406 0.594 38 H -0.311 1.311 39 H -0.264 1.264 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.843 -2.344 -2.474 4.438 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 N -0.054 5.054 3 N -0.108 5.108 4 C -0.198 4.198 5 C 0.388 3.612 6 O -0.443 6.443 7 N -0.361 5.361 8 C -0.001 4.001 9 C -0.147 4.147 10 C -0.118 4.118 11 H 0.125 0.875 12 C -0.166 4.166 13 C 0.010 3.990 14 H 0.113 0.887 15 O -0.393 6.393 16 C -0.203 4.203 17 C -0.219 4.219 18 C -0.101 4.101 19 C -0.156 4.156 20 O -0.365 6.365 21 Si 0.679 3.321 22 H 0.116 0.884 23 H 0.146 0.854 24 H 0.116 0.884 25 H 0.250 0.750 26 H 0.087 0.913 27 H 0.081 0.919 28 H 0.100 0.900 29 H 0.091 0.909 30 H 0.099 0.901 31 H 0.099 0.901 32 H 0.243 0.757 33 H 0.099 0.901 34 H 0.094 0.906 35 H 0.202 0.798 36 H 0.135 0.865 37 H 0.260 0.740 38 H -0.239 1.239 39 H -0.190 1.190 Dipole moment (debyes) X Y Z Total from point charges -3.200 -1.632 -2.106 4.164 hybrid contribution -0.557 -0.648 0.638 1.066 sum -3.757 -2.279 -1.468 4.633 Atomic orbital electron populations 1.22790 0.70877 1.07262 1.05845 1.45689 1.09077 1.01975 1.48641 1.73442 1.02814 1.14900 1.19675 1.21814 0.90889 0.94483 1.12598 1.17019 0.86329 0.82128 0.75762 1.90779 1.23720 1.77798 1.51968 1.45841 1.11532 1.04901 1.73858 1.21456 0.87950 0.88473 1.02265 1.21669 0.98026 0.91478 1.03573 1.22219 0.98046 0.93751 0.97814 0.87539 1.23136 0.99196 0.95325 0.98936 1.23503 0.98584 0.86576 0.90370 0.88716 1.86483 1.46560 1.60768 1.45445 1.23753 1.02175 0.97093 0.97282 1.21654 0.97168 0.93570 1.09538 1.21195 0.90679 0.90422 1.07768 1.24454 0.93476 0.93876 1.03814 1.86339 1.33967 1.36583 1.79659 0.93345 0.84997 0.74846 0.78882 0.88415 0.85416 0.88393 0.74974 0.91327 0.91936 0.89962 0.90912 0.90096 0.90084 0.75714 0.90117 0.90605 0.79823 0.86501 0.74037 1.23928 1.18960 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 -0.22 11.00 127.77 1.41 1.19 16 2 N -0.26 -1.08 3.70 -355.93 -1.32 -2.39 16 3 N -0.27 -2.02 11.67 -48.17 -0.56 -2.58 16 4 C -0.04 -0.37 7.13 42.46 0.30 -0.06 16 5 C 0.60 6.38 7.83 86.75 0.68 7.06 16 6 O -0.57 -9.26 16.93 -3.93 -0.07 -9.33 16 7 N -0.71 -3.27 5.55 -466.09 -2.59 -5.85 16 8 C 0.12 0.23 5.66 86.38 0.49 0.72 16 9 C -0.11 0.25 5.16 30.59 0.16 0.41 16 10 C -0.10 0.25 3.65 -10.26 -0.04 0.21 16 11 H 0.11 -0.43 8.13 -2.39 -0.02 -0.45 16 12 C -0.13 0.09 7.47 31.12 0.23 0.32 16 13 C 0.07 -0.03 5.21 31.12 0.16 0.14 16 14 H 0.10 -0.31 8.14 -2.38 -0.02 -0.33 16 15 O -0.58 -1.60 13.67 -148.98 -2.04 -3.63 16 16 C -0.17 0.19 7.46 31.12 0.23 0.43 16 17 C -0.19 -1.10 9.35 22.41 0.21 -0.89 16 18 C 0.02 0.07 6.21 41.40 0.26 0.33 16 19 C -0.05 0.20 2.98 71.23 0.21 0.41 16 20 O -0.55 2.98 9.76 -148.98 -1.45 1.52 16 21 Si 0.78 -2.69 31.24 68.60 2.14 -0.54 16 22 H 0.10 -0.61 8.14 -2.39 -0.02 -0.63 16 23 H 0.13 -0.57 5.19 -2.39 -0.01 -0.58 16 24 H 0.10 -0.42 8.14 -2.39 -0.02 -0.44 16 25 H 0.41 0.63 8.20 -92.71 -0.76 -0.13 16 26 H 0.07 0.19 8.14 -2.39 -0.02 0.17 16 27 H 0.06 0.24 8.14 -2.39 -0.02 0.22 16 28 H 0.08 -0.29 8.14 -2.39 -0.02 -0.31 16 29 H 0.07 -0.13 7.84 -2.39 -0.02 -0.15 16 30 H 0.08 -0.16 8.14 -2.39 -0.02 -0.18 16 31 H 0.08 0.12 8.10 -2.39 -0.02 0.10 16 32 H 0.39 -2.06 9.12 -74.06 -0.68 -2.74 16 33 H 0.08 0.07 7.90 -2.39 -0.02 0.05 16 34 H 0.08 -0.16 8.14 -2.39 -0.02 -0.18 16 35 H 0.18 0.32 7.04 -2.91 -0.02 0.30 16 36 H 0.12 -1.11 7.96 -2.39 -0.02 -1.13 16 37 H 0.41 -5.55 8.74 -74.05 -0.65 -6.19 16 38 H -0.31 -2.12 7.11 99.48 0.71 -1.41 16 39 H -0.26 0.44 7.11 99.48 0.71 1.15 16 Total: 0.00 -22.89 329.21 -2.53 -25.42 By element: Atomic # 1 Polarization: -11.91 SS G_CDS: -0.95 Total: -12.87 kcal Atomic # 6 Polarization: 5.95 SS G_CDS: 4.30 Total: 10.25 kcal Atomic # 7 Polarization: -6.36 SS G_CDS: -4.47 Total: -10.83 kcal Atomic # 8 Polarization: -7.88 SS G_CDS: -3.56 Total: -11.44 kcal Atomic # 14 Polarization: -2.69 SS G_CDS: 2.14 Total: -0.54 kcal Total: -22.89 -2.53 -25.42 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_17837616_13259642.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 9.035 kcal (2) G-P(sol) polarization free energy of solvation -22.895 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -13.860 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.530 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.425 kcal (6) G-S(sol) free energy of system = (1) + (5) -16.390 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.67 seconds