Wall clock time and date at job start Thu Mar 4 2021 15:09:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42907 * 1 3 3 Si 1.86295 * 109.46983 * 2 1 4 4 C 1.50701 * 109.46809 * 240.00717 * 2 1 3 5 5 C 1.38314 * 119.92337 * 120.02298 * 4 2 1 6 6 C 1.38471 * 120.28493 * 179.97438 * 5 4 2 7 7 Br 1.89094 * 119.94033 * 179.97438 * 6 5 4 8 8 C 1.38030 * 120.12038 * 359.71698 * 6 5 4 9 9 C 1.39585 * 119.84318 * 0.55444 * 8 6 5 10 10 C 1.47850 * 120.13919 * 179.71800 * 9 8 6 11 11 O 1.21556 * 119.99733 * 179.72255 * 10 9 8 12 12 N 1.34773 * 119.99937 * 359.73213 * 10 9 8 13 13 C 1.46499 * 120.00031 * 179.97438 * 12 10 9 14 14 C 1.52997 * 109.47695 * 204.99801 * 13 12 10 15 15 C 1.52997 * 109.47457 * 179.97438 * 14 13 12 16 16 C 1.53002 * 109.46817 * 60.00169 * 15 14 13 17 17 C 1.52996 * 109.47346 * 299.99737 * 16 15 14 18 18 C 1.53002 * 109.46891 * 59.99997 * 17 16 15 19 19 C 1.52997 * 109.46978 * 60.00410 * 18 17 16 20 20 C 1.53006 * 109.47164 * 299.99874 * 19 18 17 21 21 O 1.42895 * 109.47000 * 180.02562 * 20 19 18 22 22 C 1.52997 * 109.47127 * 59.99836 * 20 19 18 23 23 C 1.52999 * 109.46623 * 299.99900 * 20 19 18 24 24 C 1.37986 * 119.91832 * 299.99416 * 4 2 1 25 25 H 0.96697 * 113.99436 * 299.99706 * 1 2 3 26 26 H 1.08999 * 109.47276 * 120.00493 * 2 1 3 27 27 H 1.48504 * 110.00509 * 300.00345 * 3 2 1 28 28 H 1.48508 * 109.99929 * 61.32226 * 3 2 1 29 29 H 1.07998 * 119.86211 * 359.97438 * 5 4 2 30 30 H 1.08003 * 120.07991 * 180.30002 * 8 6 5 31 31 H 0.96998 * 120.00452 * 359.97438 * 12 10 9 32 32 H 1.09004 * 109.47041 * 324.99924 * 13 12 10 33 33 H 1.09001 * 109.46989 * 59.99548 * 14 13 12 34 34 H 1.08993 * 109.47194 * 299.99651 * 15 14 13 35 35 H 1.09002 * 109.46695 * 179.97438 * 15 14 13 36 36 H 1.09004 * 109.46733 * 179.97438 * 16 15 14 37 37 H 1.08992 * 109.47554 * 180.02562 * 17 16 15 38 38 H 1.09004 * 109.47108 * 300.00289 * 17 16 15 39 39 H 1.09002 * 109.47097 * 180.02562 * 18 17 16 40 40 H 1.09001 * 109.47375 * 59.99908 * 19 18 17 41 41 H 1.09000 * 109.47140 * 179.97438 * 19 18 17 42 42 H 0.96696 * 114.00485 * 299.99339 * 21 20 19 43 43 H 1.09002 * 109.47153 * 180.02562 * 22 20 19 44 44 H 1.09001 * 109.46832 * 60.00321 * 22 20 19 45 45 H 1.09000 * 109.47486 * 299.99829 * 23 20 19 46 46 H 1.09002 * 109.46716 * 179.97438 * 23 20 19 47 47 H 1.07999 * 120.06875 * 0.02562 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7103 -1.2306 5 6 2.7268 -0.0366 -2.1397 6 6 3.1928 -0.6821 -3.2726 7 35 4.2791 0.2485 -4.5095 8 6 2.8703 -2.0051 -3.4981 9 6 2.0632 -2.6883 -2.5870 10 6 1.7085 -4.1038 -2.8252 11 8 1.0096 -4.6977 -2.0275 12 7 2.1603 -4.7354 -3.9267 13 6 1.8093 -6.1381 -4.1625 14 6 2.8716 -6.7871 -5.0520 15 6 2.5053 -8.2522 -5.2977 16 6 1.1437 -8.3280 -5.9913 17 6 0.0814 -7.6790 -5.1019 18 6 0.4477 -6.2140 -4.8561 19 6 0.5146 -5.4738 -6.1935 20 6 1.5769 -6.1228 -7.0830 21 8 1.6398 -5.4311 -8.3318 22 6 1.2107 -7.5879 -7.3287 23 6 2.9385 -6.0469 -6.3893 24 6 1.5970 -2.0313 -1.4474 25 1 -0.3932 0.4417 0.7651 26 1 1.7924 -0.5139 0.8899 27 1 1.5615 2.4680 -1.2084 28 1 1.5879 2.4585 1.2243 29 1 2.9856 0.9973 -1.9653 30 1 3.2382 -2.5093 -4.3796 31 1 2.7178 -4.2614 -4.5634 32 1 1.7613 -6.6657 -3.2099 33 1 3.8416 -6.7334 -4.5576 34 1 2.4577 -8.7795 -4.3450 35 1 3.2620 -8.7143 -5.9317 36 1 0.8830 -9.3717 -6.1668 37 1 -0.8887 -7.7334 -5.5958 38 1 0.0336 -8.2064 -4.1491 39 1 -0.3089 -5.7517 -4.2221 40 1 -0.4555 -5.5278 -6.6876 41 1 0.7751 -4.4300 -6.0184 42 1 0.8096 -5.4381 -8.8276 43 1 1.9677 -8.0503 -7.9620 44 1 0.2406 -7.6419 -7.8229 45 1 3.1995 -5.0031 -6.2143 46 1 3.6953 -6.5096 -7.0228 47 1 0.9758 -2.5560 -0.7365 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_17849786_12335870.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 15:09:42 Heat of formation + Delta-G solvation = -93.446158 kcal Electronic energy + Delta-G solvation = -31739.117593 eV Core-core repulsion = 27512.382938 eV Total energy + Delta-G solvation = -4226.734655 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 408.077 amu Computer time = 1.04 seconds Orbital eigenvalues (eV) -42.93896 -41.29098 -39.73313 -37.83373 -37.50460 -35.82053 -33.82807 -33.68367 -33.48572 -32.24386 -31.41955 -30.46112 -27.25557 -27.06959 -26.87342 -24.96335 -22.97873 -22.65187 -22.50008 -22.36440 -21.01396 -19.34374 -18.66519 -18.56489 -18.00460 -17.60163 -17.28722 -16.48309 -16.27781 -16.16740 -15.95618 -15.55024 -15.47201 -15.32686 -15.22715 -14.87196 -14.81630 -14.67757 -14.36966 -14.14675 -13.99792 -13.77342 -13.67508 -13.59679 -13.41205 -13.11762 -12.78489 -12.43063 -12.23239 -12.10891 -12.02204 -11.98071 -11.95988 -11.85192 -11.66048 -11.45903 -11.32762 -11.00178 -10.85183 -10.68254 -10.50490 -10.26387 -10.01426 -9.87780 -5.08442 -0.47285 -0.14395 0.42580 1.11572 1.48407 1.61497 1.84458 1.99567 2.51113 3.00796 3.06208 3.32113 3.36301 3.42116 3.49914 3.71091 3.75823 3.82266 3.88900 3.90268 3.98733 4.01519 4.06340 4.09793 4.11019 4.14921 4.18884 4.23689 4.29329 4.44019 4.48790 4.58363 4.59912 4.65780 4.76435 4.86753 4.87881 4.90430 4.94480 4.95243 4.97007 5.02427 5.07535 5.10828 5.18890 5.26728 5.31308 5.38014 5.40198 5.46749 6.31160 6.37894 6.66399 7.11598 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.533 6.533 2 C -0.075 4.075 3 Si 0.676 3.324 4 C -0.072 4.072 5 C -0.062 4.062 6 C -0.093 4.093 7 Br -0.032 7.032 8 C -0.054 4.054 9 C -0.128 4.128 10 C 0.563 3.437 11 O -0.527 6.527 12 N -0.719 5.719 13 C 0.156 3.844 14 C -0.091 4.091 15 C -0.108 4.108 16 C -0.086 4.086 17 C -0.109 4.109 18 C -0.094 4.094 19 C -0.137 4.137 20 C 0.135 3.865 21 O -0.560 6.560 22 C -0.137 4.137 23 C -0.100 4.100 24 C -0.016 4.016 25 H 0.384 0.616 26 H 0.085 0.915 27 H -0.250 1.250 28 H -0.254 1.254 29 H 0.142 0.858 30 H 0.138 0.862 31 H 0.399 0.601 32 H 0.095 0.905 33 H 0.086 0.914 34 H 0.071 0.929 35 H 0.073 0.927 36 H 0.078 0.922 37 H 0.068 0.932 38 H 0.070 0.930 39 H 0.080 0.920 40 H 0.066 0.934 41 H 0.069 0.931 42 H 0.377 0.623 43 H 0.072 0.928 44 H 0.066 0.934 45 H 0.066 0.934 46 H 0.077 0.923 47 H 0.147 0.853 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.470 -0.674 0.108 2.562 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.341 6.341 2 C -0.185 4.185 3 Si 0.576 3.424 4 C -0.073 4.073 5 C -0.081 4.081 6 C -0.173 4.173 7 Br 0.054 6.946 8 C -0.075 4.075 9 C -0.132 4.132 10 C 0.350 3.650 11 O -0.404 6.404 12 N -0.372 5.372 13 C 0.052 3.948 14 C -0.110 4.110 15 C -0.146 4.146 16 C -0.105 4.105 17 C -0.147 4.147 18 C -0.113 4.113 19 C -0.174 4.174 20 C 0.095 3.905 21 O -0.366 6.366 22 C -0.175 4.175 23 C -0.137 4.137 24 C -0.035 4.035 25 H 0.232 0.768 26 H 0.102 0.898 27 H -0.174 1.174 28 H -0.179 1.179 29 H 0.160 0.840 30 H 0.155 0.845 31 H 0.236 0.764 32 H 0.113 0.887 33 H 0.105 0.895 34 H 0.090 0.910 35 H 0.091 0.909 36 H 0.096 0.904 37 H 0.087 0.913 38 H 0.088 0.912 39 H 0.098 0.902 40 H 0.085 0.915 41 H 0.088 0.912 42 H 0.225 0.775 43 H 0.091 0.909 44 H 0.084 0.916 45 H 0.084 0.916 46 H 0.096 0.904 47 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges 2.880 -0.132 -0.152 2.887 hybrid contribution -1.728 -0.132 0.230 1.748 sum 1.152 -0.264 0.078 1.185 Atomic orbital electron populations 1.86587 1.17251 1.80257 1.50001 1.24766 0.84963 1.11049 0.97712 0.95165 0.91638 0.74467 0.81112 1.19212 0.98294 0.93971 0.95867 1.21130 0.95539 0.99739 0.91701 1.21589 1.03091 0.95555 0.97040 1.96839 1.65598 1.75445 1.56705 1.21270 0.95254 0.92568 0.98397 1.19950 1.01770 0.94382 0.97141 1.18090 0.79805 0.85868 0.81262 1.90813 1.37153 1.66956 1.45452 1.46046 1.53568 1.13286 1.24267 1.21003 0.93741 0.80819 0.99261 1.21356 0.98925 0.95731 0.95017 1.21555 0.97050 0.94726 1.01280 1.21075 0.95244 0.99681 0.94467 1.21563 0.98515 0.94491 1.00157 1.21403 0.97332 0.96418 0.96165 1.22183 0.99231 1.00074 0.95947 1.21069 0.95226 0.90544 0.83677 1.86544 1.39528 1.77568 1.32993 1.22202 1.02167 0.95565 0.97565 1.21434 0.96062 1.00755 0.95492 1.21258 0.94102 0.92986 0.95153 0.76769 0.89757 1.17408 1.17919 0.84048 0.84479 0.76385 0.88675 0.89549 0.91011 0.90878 0.90356 0.91327 0.91157 0.90150 0.91481 0.91219 0.77534 0.90945 0.91554 0.91577 0.90415 0.83527 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.38 12.74 -35.23 -0.45 -0.83 16 2 C -0.08 0.05 2.81 36.01 0.10 0.15 16 3 Si 0.68 -0.97 29.78 -169.99 -5.06 -6.03 16 4 C -0.07 -0.05 5.42 -104.69 -0.57 -0.62 16 5 C -0.06 -0.01 8.41 -39.47 -0.33 -0.34 16 6 C -0.09 -0.02 6.22 -39.57 -0.25 -0.27 16 7 Br -0.03 0.00 33.69 -68.01 -2.29 -2.29 16 8 C -0.05 0.01 9.28 -39.16 -0.36 -0.36 16 9 C -0.13 -0.17 5.87 -104.97 -0.62 -0.79 16 10 C 0.56 1.31 7.74 -12.33 -0.10 1.22 16 11 O -0.53 -3.00 16.01 5.32 0.09 -2.92 16 12 N -0.72 0.13 4.19 -54.75 -0.23 -0.10 16 13 C 0.16 -0.04 2.05 -67.93 -0.14 -0.18 16 14 C -0.09 0.15 2.88 -90.62 -0.26 -0.11 16 15 C -0.11 0.20 5.19 -26.73 -0.14 0.07 16 16 C -0.09 0.14 3.19 -90.62 -0.29 -0.15 16 17 C -0.11 0.10 5.19 -26.73 -0.14 -0.04 16 18 C -0.09 0.00 2.88 -90.62 -0.26 -0.26 16 19 C -0.14 0.06 4.66 -26.73 -0.12 -0.06 16 20 C 0.14 -0.09 1.15 -90.62 -0.10 -0.20 16 21 O -0.56 -0.20 12.98 -35.23 -0.46 -0.66 16 22 C -0.14 0.18 4.82 -26.73 -0.13 0.05 16 23 C -0.10 0.10 4.67 -26.73 -0.12 -0.02 16 24 C -0.02 -0.03 9.15 -39.18 -0.36 -0.39 16 25 H 0.38 -1.27 8.74 45.56 0.40 -0.87 16 26 H 0.08 -0.21 7.96 -51.93 -0.41 -0.62 16 27 H -0.25 -0.41 7.11 56.52 0.40 -0.01 16 28 H -0.25 -0.12 7.11 56.52 0.40 0.28 16 29 H 0.14 -0.19 4.86 -52.49 -0.26 -0.45 16 30 H 0.14 -0.30 6.41 -52.48 -0.34 -0.64 16 31 H 0.40 -0.74 4.90 -40.82 -0.20 -0.94 16 32 H 0.10 0.12 7.58 -51.93 -0.39 -0.28 16 33 H 0.09 -0.18 8.14 -51.93 -0.42 -0.60 16 34 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 35 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 36 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 37 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 38 H 0.07 -0.05 8.14 -51.93 -0.42 -0.48 16 39 H 0.08 0.16 8.14 -51.93 -0.42 -0.27 16 40 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 41 H 0.07 0.02 7.61 -51.93 -0.39 -0.37 16 42 H 0.38 -1.02 9.05 45.56 0.41 -0.61 16 43 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 44 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 45 H 0.07 -0.08 6.51 -51.93 -0.34 -0.42 16 46 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 47 H 0.15 0.36 7.65 -52.49 -0.40 -0.04 16 LS Contribution 375.99 15.07 5.67 5.67 Total: 0.00 -7.23 375.99 -12.70 -19.92 By element: Atomic # 1 Polarization: -4.70 SS G_CDS: -5.77 Total: -10.47 kcal Atomic # 6 Polarization: 1.89 SS G_CDS: -4.19 Total: -2.29 kcal Atomic # 7 Polarization: 0.13 SS G_CDS: -0.23 Total: -0.10 kcal Atomic # 8 Polarization: -3.58 SS G_CDS: -0.82 Total: -4.40 kcal Atomic # 14 Polarization: -0.97 SS G_CDS: -5.06 Total: -6.03 kcal Atomic # 35 Polarization: 0.00 SS G_CDS: -2.29 Total: -2.29 kcal Total LS contribution 5.67 Total: 5.67 kcal Total: -7.23 -12.70 -19.92 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_17849786_12335870.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -73.522 kcal (2) G-P(sol) polarization free energy of solvation -7.229 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -80.751 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.695 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.924 kcal (6) G-S(sol) free energy of system = (1) + (5) -93.446 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.04 seconds