Wall clock time and date at job start Thu Mar 4 2021 15:12:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86292 * 109.47551 * 2 1 4 4 C 1.50697 * 109.46860 * 120.00391 * 2 1 3 5 5 C 1.38246 * 119.97134 * 245.01708 * 4 2 1 6 6 C 1.38283 * 120.11496 * 179.97438 * 5 4 2 7 7 C 1.38126 * 120.05451 * 359.67883 * 6 5 4 8 8 C 1.38755 * 119.94284 * 0.60019 * 7 6 5 9 9 O 1.35901 * 120.05678 * 179.69869 * 8 7 6 10 10 C 1.42895 * 116.99781 * 359.72393 * 9 8 7 11 11 C 1.53007 * 109.46735 * 180.02562 * 10 9 8 12 12 C 1.50706 * 109.46996 * 179.97438 * 11 10 9 13 13 O 1.21281 * 119.99941 * 0.02562 * 12 11 10 14 14 N 1.34773 * 120.00218 * 179.97438 * 12 11 10 15 15 C 1.46496 * 120.00333 * 179.97438 * 14 12 11 16 16 C 1.53002 * 109.47045 * 155.00090 * 15 14 12 17 17 C 1.52997 * 109.46978 * 60.00600 * 16 15 14 18 18 C 1.53002 * 109.47092 * 59.99700 * 17 16 15 19 19 C 1.53005 * 109.47274 * 299.99684 * 18 17 16 20 20 C 1.53000 * 109.46632 * 60.00466 * 19 18 17 21 21 C 1.52996 * 109.47518 * 59.99681 * 20 19 18 22 22 C 1.52997 * 109.47131 * 300.00172 * 21 20 19 23 23 O 1.42905 * 109.47264 * 179.97438 * 22 21 20 24 24 C 1.52996 * 109.47343 * 60.00063 * 18 17 16 25 25 C 1.52999 * 109.47317 * 299.99507 * 22 21 20 26 26 C 1.38171 * 119.97633 * 64.99572 * 4 2 1 27 27 H 0.96704 * 113.99772 * 300.00246 * 1 2 3 28 28 H 1.09006 * 109.46665 * 239.99827 * 2 1 3 29 29 H 1.48496 * 110.00295 * 178.68236 * 3 2 1 30 30 H 1.48503 * 110.00229 * 300.00335 * 3 2 1 31 31 H 1.08005 * 119.94200 * 359.97438 * 5 4 2 32 32 H 1.08002 * 119.97608 * 179.97438 * 6 5 4 33 33 H 1.08005 * 120.03260 * 180.31637 * 7 6 5 34 34 H 1.08994 * 109.47429 * 60.00130 * 10 9 8 35 35 H 1.09001 * 109.47084 * 299.99896 * 10 9 8 36 36 H 1.09002 * 109.46987 * 60.00112 * 11 10 9 37 37 H 1.08993 * 109.47243 * 299.99993 * 11 10 9 38 38 H 0.97001 * 119.99421 * 0.02562 * 14 12 11 39 39 H 1.09004 * 109.46875 * 35.00429 * 15 14 12 40 40 H 1.09001 * 109.47142 * 300.00367 * 16 15 14 41 41 H 1.09002 * 109.47045 * 299.99833 * 17 16 15 42 42 H 1.09000 * 109.47140 * 179.97438 * 17 16 15 43 43 H 1.09004 * 109.46930 * 180.02562 * 18 17 16 44 44 H 1.08992 * 109.46876 * 179.97438 * 19 18 17 45 45 H 1.08992 * 109.47199 * 300.00708 * 19 18 17 46 46 H 1.09000 * 109.46968 * 179.97438 * 20 19 18 47 47 H 1.08996 * 109.47452 * 180.02562 * 21 20 19 48 48 H 1.09001 * 109.46997 * 59.99746 * 21 20 19 49 49 H 0.96696 * 114.00036 * 299.99911 * 23 22 21 50 50 H 1.09001 * 109.47372 * 179.97438 * 24 18 17 51 51 H 1.09000 * 109.46870 * 59.99786 * 24 18 17 52 52 H 1.09000 * 109.47486 * 180.02562 * 25 22 21 53 53 H 1.09001 * 109.47362 * 300.00732 * 25 22 21 54 54 H 1.07998 * 120.02408 * 0.04664 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7563 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 2.6383 -0.0117 2.1911 6 6 3.1001 -0.6606 3.3216 7 6 2.8501 -2.0077 3.4967 8 6 2.1457 -2.7126 2.5312 9 8 1.9038 -4.0395 2.6982 10 6 2.4091 -4.6461 3.8892 11 6 2.0418 -6.1314 3.9003 12 6 2.5753 -6.7714 5.1561 13 8 3.1885 -6.1051 5.9629 14 7 2.3702 -8.0840 5.3830 15 6 2.8893 -8.7063 6.6034 16 6 2.0519 -9.9412 6.9420 17 6 2.1288 -10.9418 5.7871 18 6 3.5850 -11.3572 5.5683 19 6 4.4223 -10.1221 5.2296 20 6 4.3455 -9.1216 6.3846 21 6 4.8875 -9.7715 7.6592 22 6 4.0502 -11.0065 7.9978 23 8 4.5569 -11.6138 9.1880 24 6 4.1271 -12.0070 6.8429 25 6 2.5941 -10.5911 8.2167 26 6 1.6844 -2.0596 1.3977 27 1 -0.3933 0.4418 0.7651 28 1 1.7923 -0.5139 -0.8900 29 1 3.5347 1.7701 0.0321 30 1 1.5616 2.4679 -1.2085 31 1 2.8304 1.0428 2.0585 32 1 3.6526 -0.1126 4.0705 33 1 3.2066 -2.5130 4.3822 34 1 1.9722 -4.1569 4.7597 35 1 3.4936 -4.5401 3.9189 36 1 2.4791 -6.6203 3.0297 37 1 0.9575 -6.2378 3.8703 38 1 1.8795 -8.6168 4.7378 39 1 2.8345 -7.9934 7.4263 40 1 1.0145 -9.6453 7.0980 41 1 1.7426 -10.4788 4.8790 42 1 1.5326 -11.8218 6.0285 43 1 3.6398 -12.0697 4.7451 44 1 5.4597 -10.4180 5.0741 45 1 4.0361 -9.6592 4.3216 46 1 4.9423 -8.2420 6.1435 47 1 4.8323 -9.0589 8.4821 48 1 5.9249 -10.0674 7.5033 49 1 5.4772 -11.9027 9.1211 50 1 5.1644 -12.3033 6.6868 51 1 3.5306 -12.8868 7.0841 52 1 1.9976 -11.4709 8.4584 53 1 2.5393 -9.8782 9.0395 54 1 1.1323 -2.6051 0.6467 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_17849786_4549614.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 15:12:57 Heat of formation + Delta-G solvation = -141.797177 kcal Electronic energy + Delta-G solvation = -34567.314504 eV Core-core repulsion = 30048.543765 eV Total energy + Delta-G solvation = -4518.770740 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.197 amu Computer time = 1.68 seconds Orbital eigenvalues (eV) -42.87287 -41.36860 -40.52882 -39.13032 -37.65251 -37.26199 -35.39437 -33.78368 -33.60186 -32.92163 -32.47761 -31.23955 -30.60253 -27.26308 -27.01026 -26.74130 -25.05145 -23.69317 -22.83839 -22.59162 -22.54031 -21.90368 -21.09172 -19.41037 -18.86532 -18.20897 -17.97337 -17.69847 -17.50565 -17.11379 -16.99431 -16.71967 -16.30090 -16.07623 -15.89046 -15.50194 -15.40021 -15.30310 -15.17424 -15.01070 -14.82390 -14.47826 -14.41391 -14.20417 -14.19751 -13.96195 -13.59604 -13.55176 -13.40715 -13.27431 -13.04046 -12.93641 -12.84273 -12.55885 -12.37792 -12.06944 -12.05205 -11.97755 -11.84898 -11.82923 -11.64349 -11.39958 -11.26487 -11.07126 -10.85945 -10.48906 -10.43431 -10.06300 -9.96131 -9.28987 -4.98358 0.18078 0.37380 1.29646 1.50780 1.65228 1.68600 1.97134 2.45367 2.64892 3.12435 3.38991 3.41947 3.50124 3.55171 3.66188 3.78909 3.82401 3.85602 3.86891 3.94497 3.95266 4.04800 4.07839 4.12205 4.16158 4.20915 4.22058 4.23693 4.26289 4.36031 4.37707 4.48822 4.54317 4.58322 4.62071 4.65340 4.67592 4.73904 4.76220 4.84515 4.95934 4.97901 4.98525 5.00876 5.02261 5.09460 5.13482 5.24097 5.29259 5.32993 5.36279 5.36597 5.42224 5.45540 5.49249 5.68848 6.30775 6.44426 6.75642 6.81576 7.14043 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.555 6.555 2 C -0.078 4.078 3 Si 0.784 3.216 4 C -0.085 4.085 5 C -0.155 4.155 6 C -0.075 4.075 7 C -0.211 4.211 8 C 0.116 3.884 9 O -0.324 6.324 10 C 0.075 3.925 11 C -0.133 4.133 12 C 0.521 3.479 13 O -0.582 6.582 14 N -0.707 5.707 15 C 0.159 3.841 16 C -0.082 4.082 17 C -0.111 4.111 18 C -0.082 4.082 19 C -0.106 4.106 20 C -0.090 4.090 21 C -0.134 4.134 22 C 0.134 3.866 23 O -0.580 6.580 24 C -0.134 4.134 25 C -0.099 4.099 26 C -0.142 4.142 27 H 0.396 0.604 28 H 0.106 0.894 29 H -0.286 1.286 30 H -0.298 1.298 31 H 0.151 0.849 32 H 0.153 0.847 33 H 0.136 0.864 34 H 0.065 0.935 35 H 0.063 0.937 36 H 0.126 0.874 37 H 0.127 0.873 38 H 0.416 0.584 39 H 0.065 0.935 40 H 0.093 0.907 41 H 0.083 0.917 42 H 0.078 0.922 43 H 0.088 0.912 44 H 0.064 0.936 45 H 0.073 0.927 46 H 0.057 0.943 47 H 0.055 0.945 48 H 0.074 0.926 49 H 0.389 0.611 50 H 0.070 0.930 51 H 0.070 0.930 52 H 0.077 0.923 53 H 0.058 0.942 54 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.123 -2.469 -0.387 2.740 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.363 6.363 2 C -0.187 4.187 3 Si 0.690 3.310 4 C -0.085 4.085 5 C -0.172 4.172 6 C -0.093 4.093 7 C -0.230 4.230 8 C 0.071 3.929 9 O -0.238 6.238 10 C 0.000 4.000 11 C -0.173 4.173 12 C 0.308 3.692 13 O -0.462 6.462 14 N -0.359 5.359 15 C 0.054 3.946 16 C -0.101 4.101 17 C -0.149 4.149 18 C -0.101 4.101 19 C -0.143 4.143 20 C -0.109 4.109 21 C -0.172 4.172 22 C 0.094 3.906 23 O -0.388 6.388 24 C -0.172 4.172 25 C -0.137 4.137 26 C -0.161 4.161 27 H 0.246 0.754 28 H 0.124 0.876 29 H -0.212 1.212 30 H -0.226 1.226 31 H 0.168 0.832 32 H 0.171 0.829 33 H 0.154 0.846 34 H 0.084 0.916 35 H 0.082 0.918 36 H 0.144 0.856 37 H 0.145 0.855 38 H 0.255 0.745 39 H 0.083 0.917 40 H 0.111 0.889 41 H 0.101 0.899 42 H 0.096 0.904 43 H 0.106 0.894 44 H 0.083 0.917 45 H 0.091 0.909 46 H 0.075 0.925 47 H 0.074 0.926 48 H 0.093 0.907 49 H 0.239 0.761 50 H 0.089 0.911 51 H 0.089 0.911 52 H 0.095 0.905 53 H 0.077 0.923 54 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges -0.849 -1.759 -0.690 2.071 hybrid contribution 0.854 -0.946 -0.215 1.292 sum 0.006 -2.704 -0.905 2.852 Atomic orbital electron populations 1.86474 1.17120 1.82244 1.50455 1.25297 0.85385 1.11252 0.96777 0.93571 0.77807 0.74875 0.84740 1.20250 0.98003 0.93384 0.96905 1.21172 1.00859 1.00513 0.94705 1.21260 0.97139 0.93424 0.97496 1.21551 1.04294 0.96641 1.00509 1.19147 0.95812 0.82969 0.94958 1.85951 1.74691 1.20329 1.42864 1.22426 0.99081 0.93069 0.85470 1.21445 1.05470 0.93477 0.96871 1.20613 0.78756 0.82348 0.87467 1.90739 1.42943 1.63599 1.48911 1.45921 1.57203 1.08948 1.23836 1.20844 0.92900 0.94018 0.86876 1.21265 0.99664 0.93918 0.95286 1.21647 0.96341 0.99065 0.97823 1.21060 0.94882 0.96822 0.97296 1.21541 1.00512 0.95022 0.97224 1.21309 0.95731 0.98156 0.95751 1.22137 1.00029 0.97652 0.97374 1.21134 0.93747 0.91294 0.84446 1.86522 1.33663 1.80926 1.37671 1.22170 1.02173 0.98139 0.94711 1.21394 0.94049 1.00982 0.97297 1.20330 1.03967 0.94416 0.97349 0.75428 0.87635 1.21246 1.22625 0.83228 0.82887 0.84649 0.91639 0.91844 0.85626 0.85519 0.74518 0.91707 0.88890 0.89880 0.90358 0.89398 0.91719 0.90870 0.92465 0.92577 0.90698 0.76116 0.91105 0.91143 0.90465 0.92291 0.85529 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.85 12.83 -148.98 -1.91 -2.76 16 2 C -0.08 -0.06 2.80 71.23 0.20 0.14 16 3 Si 0.78 -1.42 29.80 68.60 2.04 0.63 16 4 C -0.08 -0.19 5.35 -19.88 -0.11 -0.29 16 5 C -0.16 0.05 8.67 22.28 0.19 0.24 16 6 C -0.08 -0.02 10.04 22.25 0.22 0.20 16 7 C -0.21 -0.70 9.04 22.37 0.20 -0.49 16 8 C 0.12 0.65 6.69 22.51 0.15 0.80 16 9 O -0.32 -1.54 10.14 -92.44 -0.94 -2.48 16 10 C 0.08 0.11 4.03 71.98 0.29 0.40 16 11 C -0.13 0.53 6.07 29.85 0.18 0.71 16 12 C 0.52 0.31 7.79 87.66 0.68 0.99 16 13 O -0.58 -5.68 15.64 -3.03 -0.05 -5.73 16 14 N -0.71 2.96 4.23 -442.53 -1.87 1.09 16 15 C 0.16 -0.17 2.05 44.99 0.09 -0.08 16 16 C -0.08 0.35 2.88 -10.79 -0.03 0.32 16 17 C -0.11 0.83 5.02 30.59 0.15 0.98 16 18 C -0.08 0.49 3.19 -10.79 -0.03 0.46 16 19 C -0.11 0.46 5.04 30.60 0.15 0.61 16 20 C -0.09 0.04 2.87 -10.79 -0.03 0.01 16 21 C -0.13 -0.02 4.81 30.59 0.15 0.13 16 22 C 0.13 -0.08 1.15 -10.80 -0.01 -0.09 16 23 O -0.58 -1.19 12.98 -148.98 -1.93 -3.13 16 24 C -0.13 0.50 4.81 30.59 0.15 0.64 16 25 C -0.10 0.05 4.84 30.60 0.15 0.20 16 26 C -0.14 -0.75 9.62 22.37 0.22 -0.53 16 27 H 0.40 -2.64 8.70 -74.05 -0.64 -3.29 16 28 H 0.11 0.23 7.96 -2.38 -0.02 0.21 16 29 H -0.29 -0.83 7.11 99.48 0.71 -0.12 16 30 H -0.30 -1.64 7.11 99.48 0.71 -0.93 16 31 H 0.15 -0.81 4.90 -2.91 -0.01 -0.82 16 32 H 0.15 -0.72 8.06 -2.91 -0.02 -0.75 16 33 H 0.14 0.27 6.30 -2.91 -0.02 0.25 16 34 H 0.07 0.18 7.61 -2.39 -0.02 0.16 16 35 H 0.06 0.19 7.63 -2.39 -0.02 0.17 16 36 H 0.13 -0.95 8.14 -2.39 -0.02 -0.97 16 37 H 0.13 -0.96 8.14 -2.39 -0.02 -0.98 16 38 H 0.42 -4.20 6.87 -92.71 -0.64 -4.83 16 39 H 0.06 0.31 7.58 -2.38 -0.02 0.29 16 40 H 0.09 -0.51 8.14 -2.39 -0.02 -0.52 16 41 H 0.08 -0.90 6.51 -2.39 -0.02 -0.92 16 42 H 0.08 -0.60 8.14 -2.39 -0.02 -0.61 16 43 H 0.09 -0.65 8.14 -2.38 -0.02 -0.67 16 44 H 0.06 -0.24 8.14 -2.39 -0.02 -0.26 16 45 H 0.07 -0.41 7.60 -2.39 -0.02 -0.43 16 46 H 0.06 0.24 8.14 -2.39 -0.02 0.22 16 47 H 0.06 0.20 8.14 -2.39 -0.02 0.18 16 48 H 0.07 -0.10 8.14 -2.39 -0.02 -0.11 16 49 H 0.39 -1.87 9.04 -74.06 -0.67 -2.54 16 50 H 0.07 -0.32 8.14 -2.39 -0.02 -0.34 16 51 H 0.07 -0.20 8.14 -2.39 -0.02 -0.22 16 52 H 0.08 -0.03 8.14 -2.39 -0.02 -0.05 16 53 H 0.06 0.14 8.14 -2.39 -0.02 0.12 16 54 H 0.13 0.72 8.06 -2.91 -0.02 0.69 16 Total: 0.00 -21.45 409.28 -2.67 -24.12 By element: Atomic # 1 Polarization: -16.10 SS G_CDS: -0.98 Total: -17.08 kcal Atomic # 6 Polarization: 2.38 SS G_CDS: 2.97 Total: 5.34 kcal Atomic # 7 Polarization: 2.96 SS G_CDS: -1.87 Total: 1.09 kcal Atomic # 8 Polarization: -9.27 SS G_CDS: -4.83 Total: -14.10 kcal Atomic # 14 Polarization: -1.42 SS G_CDS: 2.04 Total: 0.63 kcal Total: -21.45 -2.67 -24.12 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_17849786_4549614.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -117.680 kcal (2) G-P(sol) polarization free energy of solvation -21.448 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -139.129 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.669 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.117 kcal (6) G-S(sol) free energy of system = (1) + (5) -141.797 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.68 seconds