Wall clock time and date at job start Thu Mar 4 2021 16:16:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45200 * 1 3 3 C 1.34232 * 117.00044 * 2 1 4 4 O 1.20832 * 119.99825 * 0.02562 * 3 2 1 5 5 C 1.50702 * 120.00245 * 179.97438 * 3 2 1 6 6 N 1.46501 * 108.88203 * 325.00166 * 5 3 2 7 7 C 1.34774 * 120.00179 * 59.99774 * 6 5 3 8 8 O 1.21568 * 120.00087 * 0.02562 * 7 6 5 9 9 C 1.47707 * 120.00095 * 180.02562 * 7 6 5 10 10 N 1.31815 * 126.51839 * 359.97438 * 9 7 6 11 11 N 1.28467 * 110.07420 * 180.02562 * 10 9 7 12 12 C 1.46500 * 124.88433 * 180.02562 * 11 10 9 13 13 C 1.35031 * 110.23313 * 359.97438 * 11 10 9 14 14 C 1.50697 * 126.38808 * 180.02562 * 13 11 10 15 15 O 1.42906 * 109.46831 * 30.00837 * 14 13 11 16 16 Si 1.86300 * 109.47007 * 150.00226 * 14 13 11 17 17 H 1.48503 * 109.46942 * 60.00611 * 16 14 13 18 18 H 1.48503 * 109.47276 * 180.02562 * 16 14 13 19 19 H 1.48494 * 109.47372 * 300.00074 * 16 14 13 20 20 C 1.35369 * 107.22691 * 0.27220 * 13 11 10 21 21 C 1.52579 * 108.90364 * 83.62900 * 5 3 2 22 22 C 1.54215 * 109.29252 * 198.48010 * 21 5 3 23 23 Si 1.85199 * 106.98736 * 303.15565 * 22 21 5 24 24 C 1.87753 * 111.40999 * 166.95743 * 23 22 21 25 25 C 1.56396 * 98.97337 * 98.21244 * 24 23 22 26 26 C 1.53786 * 109.77966 * 39.35372 * 25 24 23 27 27 C 1.55687 * 111.40289 * 312.19351 * 26 25 24 28 28 C 1.85207 * 109.99488 * 42.91439 * 23 22 21 29 29 C 1.52587 * 108.90278 * 206.37310 * 5 3 2 30 30 H 1.08998 * 109.47087 * 180.02562 * 1 2 3 31 31 H 1.09003 * 109.47056 * 300.00039 * 1 2 3 32 32 H 1.08999 * 109.47111 * 60.00194 * 1 2 3 33 33 H 0.96997 * 119.99809 * 240.00166 * 6 5 3 34 34 H 1.08998 * 109.46837 * 269.95322 * 12 11 10 35 35 H 1.09003 * 109.47294 * 29.95311 * 12 11 10 36 36 H 1.09003 * 109.47505 * 149.95268 * 12 11 10 37 37 H 1.09000 * 109.47374 * 270.00410 * 14 13 11 38 38 H 0.96693 * 114.00047 * 60.00191 * 15 14 13 39 39 H 1.07997 * 127.25018 * 179.70446 * 20 13 11 40 40 H 1.09004 * 109.51743 * 318.28019 * 21 5 3 41 41 H 1.09004 * 109.51634 * 78.44012 * 21 5 3 42 42 H 1.09001 * 109.95297 * 183.80304 * 22 21 5 43 43 H 1.08992 * 109.98827 * 62.53204 * 22 21 5 44 44 H 1.09001 * 111.49584 * 215.65568 * 24 23 22 45 45 H 1.09004 * 111.48934 * 340.76812 * 24 23 22 46 46 H 1.09000 * 109.41860 * 279.26399 * 25 24 23 47 47 H 1.08998 * 109.42273 * 159.44792 * 25 24 23 48 48 H 1.09004 * 109.10221 * 191.68403 * 26 25 24 49 49 H 1.08997 * 109.10422 * 72.70389 * 26 25 24 50 50 H 1.08995 * 111.14909 * 270.10412 * 27 26 25 51 51 H 1.09004 * 111.14869 * 145.88896 * 27 26 25 52 52 H 1.09003 * 109.94545 * 197.71499 * 28 23 22 53 53 H 1.09006 * 109.94214 * 76.48495 * 28 23 22 54 54 H 1.09004 * 109.51061 * 281.54474 * 29 5 3 55 55 H 1.08990 * 109.52161 * 41.71277 * 29 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2094 0.0005 5 6 3.5664 1.2749 0.0006 6 7 4.0990 0.1660 0.7961 7 6 3.8313 -1.1067 0.4423 8 8 3.1482 -1.3344 -0.5372 9 6 4.3678 -2.2247 1.2446 10 7 5.1183 -2.1264 2.3238 11 7 5.4064 -3.2966 2.7686 12 6 6.2239 -3.5644 3.9545 13 6 4.8466 -4.2444 1.9866 14 6 4.9509 -5.7358 2.1757 15 8 5.0908 -6.0308 3.5670 16 14 3.4115 -6.5542 1.5191 17 1 3.2661 -6.2477 0.0734 18 1 3.5140 -8.0239 1.7061 19 1 2.2271 -6.0436 2.2550 20 6 4.1787 -3.6052 0.9977 21 6 4.0690 1.1406 -1.4338 22 6 5.5623 0.7559 -1.4165 23 14 6.4464 2.0626 -0.4466 24 6 8.1923 1.5280 -0.0092 25 6 8.9667 2.2675 -1.1492 26 6 8.3489 3.6565 -1.3818 27 6 6.7981 3.5770 -1.4938 28 6 5.4724 2.4950 1.0681 29 6 3.9920 2.5925 0.6417 30 1 -0.3633 -1.0276 0.0005 31 1 -0.3633 0.5139 0.8900 32 1 -0.3633 0.5138 -0.8900 33 1 4.6442 0.3477 1.5774 34 1 7.2710 -3.6461 3.6631 35 1 6.1079 -2.7482 4.6677 36 1 5.9010 -4.4980 4.4152 37 1 5.8203 -6.1107 1.6356 38 1 4.3513 -5.7254 4.1101 39 1 3.6182 -4.0541 0.1912 40 1 3.5015 0.3644 -1.9473 41 1 3.9425 2.0899 -1.9544 42 1 5.9497 0.7228 -2.4348 43 1 5.6915 -0.2143 -0.9369 44 1 8.4868 1.8922 0.9750 45 1 8.3092 0.4468 -0.0832 46 1 8.9032 1.6842 -2.0678 47 1 10.0126 2.3793 -0.8635 48 1 8.7520 4.0763 -2.3035 49 1 8.6135 4.3085 -0.5494 50 1 6.4858 3.4221 -2.5265 51 1 6.3273 4.4649 -1.0716 52 1 5.8086 3.4526 1.4656 53 1 5.5916 1.7163 1.8216 54 1 3.8731 3.4027 -0.0778 55 1 3.3731 2.7882 1.5173 RHF calculation, no. of doubly occupied orbitals= 72 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_18339704_13259642.mol2 55 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 16:16:14 Heat of formation + Delta-G solvation = -90.262972 kcal Electronic energy + Delta-G solvation = -37952.107231 eV Core-core repulsion = 33308.276398 eV Total energy + Delta-G solvation = -4643.830833 eV No. of doubly occupied orbitals = 72 Molecular weight (most abundant/longest-lived isotopes) = 395.188 amu Computer time = 1.46 seconds Orbital eigenvalues (eV) -43.81667 -42.34241 -40.41695 -38.31475 -38.06237 -37.24245 -36.13067 -34.44347 -33.45146 -32.41220 -32.34194 -29.70848 -29.67091 -28.45397 -27.69273 -26.65955 -24.84944 -24.45264 -23.74025 -23.04256 -22.24126 -21.36037 -20.96694 -20.38455 -19.30735 -18.88346 -18.10411 -17.60713 -17.48422 -17.38027 -17.14525 -16.56463 -16.07055 -15.99563 -15.88819 -15.78930 -15.58778 -15.36721 -15.18869 -14.93271 -14.70725 -14.56630 -14.33100 -14.23578 -14.10434 -13.61730 -13.51866 -13.41405 -13.36274 -13.16393 -13.10409 -12.87608 -12.54216 -12.45371 -12.39111 -12.36088 -12.29124 -12.10877 -12.03728 -11.96854 -11.82240 -11.76986 -11.61693 -11.32988 -11.12648 -10.82159 -10.47956 -10.32095 -10.22864 -10.19069 -10.04589 -9.92477 0.49553 0.79609 0.94355 1.16695 1.50565 1.52093 1.60839 1.68381 1.79100 1.84528 1.92315 1.96681 2.06240 2.40353 2.64036 3.15173 3.27337 3.38642 3.42759 3.61695 3.70607 4.06485 4.13837 4.16653 4.17225 4.17486 4.22840 4.31586 4.37124 4.37805 4.43189 4.44093 4.46082 4.50452 4.56685 4.60624 4.65178 4.68746 4.70303 4.77531 4.84462 4.98365 5.04427 5.05490 5.12376 5.15422 5.19939 5.23805 5.26331 5.31160 5.36210 5.40078 5.40768 5.55526 5.58492 5.72349 6.36729 6.47963 6.59174 6.85011 7.17446 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.334 6.334 3 C 0.451 3.549 4 O -0.531 6.531 5 C 0.193 3.807 6 N -0.703 5.703 7 C 0.604 3.396 8 O -0.519 6.519 9 C -0.035 4.035 10 N -0.262 5.262 11 N -0.258 5.258 12 C 0.061 3.939 13 C -0.011 4.011 14 C -0.042 4.042 15 O -0.539 6.539 16 Si 0.998 3.002 17 H -0.261 1.261 18 H -0.257 1.257 19 H -0.263 1.263 20 C -0.201 4.201 21 C -0.117 4.117 22 C -0.408 4.408 23 Si 1.044 2.956 24 C -0.411 4.411 25 C -0.127 4.127 26 C -0.122 4.122 27 C -0.416 4.416 28 C -0.410 4.410 29 C -0.103 4.103 30 H 0.117 0.883 31 H 0.061 0.939 32 H 0.060 0.940 33 H 0.420 0.580 34 H 0.094 0.906 35 H 0.103 0.897 36 H 0.136 0.864 37 H 0.145 0.855 38 H 0.393 0.607 39 H 0.163 0.837 40 H 0.068 0.932 41 H 0.095 0.905 42 H 0.085 0.915 43 H 0.068 0.932 44 H 0.085 0.915 45 H 0.074 0.926 46 H 0.061 0.939 47 H 0.062 0.938 48 H 0.057 0.943 49 H 0.066 0.934 50 H 0.076 0.924 51 H 0.087 0.913 52 H 0.110 0.890 53 H 0.090 0.910 54 H 0.103 0.897 55 H 0.076 0.924 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.394 -2.892 5.111 7.335 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.248 6.248 3 C 0.294 3.706 4 O -0.420 6.420 5 C 0.104 3.896 6 N -0.362 5.362 7 C 0.389 3.611 8 O -0.392 6.392 9 C -0.193 4.193 10 N -0.100 5.100 11 N -0.047 5.047 12 C -0.077 4.077 13 C -0.137 4.137 14 C -0.153 4.153 15 O -0.346 6.346 16 Si 0.820 3.180 17 H -0.185 1.185 18 H -0.181 1.181 19 H -0.187 1.187 20 C -0.229 4.229 21 C -0.156 4.156 22 C -0.492 4.492 23 Si 1.235 2.765 24 C -0.497 4.497 25 C -0.165 4.165 26 C -0.160 4.160 27 C -0.502 4.502 28 C -0.496 4.496 29 C -0.140 4.140 30 H 0.135 0.865 31 H 0.080 0.920 32 H 0.079 0.921 33 H 0.261 0.739 34 H 0.112 0.888 35 H 0.122 0.878 36 H 0.154 0.846 37 H 0.162 0.838 38 H 0.243 0.757 39 H 0.180 0.820 40 H 0.087 0.913 41 H 0.113 0.887 42 H 0.104 0.896 43 H 0.087 0.913 44 H 0.104 0.896 45 H 0.093 0.907 46 H 0.080 0.920 47 H 0.081 0.919 48 H 0.076 0.924 49 H 0.085 0.915 50 H 0.095 0.905 51 H 0.106 0.894 52 H 0.129 0.871 53 H 0.108 0.892 54 H 0.121 0.879 55 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges 3.996 -2.716 4.721 6.755 hybrid contribution -0.677 0.110 -0.218 0.720 sum 3.318 -2.606 4.503 6.171 Atomic orbital electron populations 1.23459 0.76461 1.04872 1.02181 1.86903 1.23517 1.31989 1.82391 1.24731 0.92959 0.81610 0.71346 1.90658 1.67458 1.37132 1.46775 1.20449 0.84122 0.89792 0.95192 1.46028 1.54646 1.03709 1.31781 1.16953 0.79055 0.81743 0.83323 1.90800 1.37248 1.84144 1.26987 1.21737 1.05291 0.94593 0.97637 1.73468 1.16039 1.08296 1.12177 1.45707 1.35352 1.01487 1.22149 1.22965 0.95108 1.06550 0.83034 1.22149 1.01404 0.94858 0.95286 1.24692 1.14506 0.88131 0.87986 1.86465 1.49512 1.82226 1.16421 0.84991 0.74290 0.78811 0.79908 1.18508 1.18098 1.18738 1.21659 1.06560 0.92081 1.02601 1.21687 0.97951 1.03760 0.92163 1.26371 1.00008 1.12580 1.10240 0.78945 0.65544 0.65767 0.66253 1.26708 1.18817 1.03088 1.01052 1.22078 1.00176 0.95768 0.98477 1.21878 0.95063 0.97085 1.01960 1.26627 0.98522 1.15572 1.09437 1.26346 1.00391 1.07982 1.14903 1.21571 0.97891 0.92575 1.01986 0.86481 0.92043 0.92117 0.73919 0.88786 0.87849 0.84644 0.83756 0.75655 0.81983 0.91326 0.88694 0.89580 0.91305 0.89582 0.90731 0.92027 0.91905 0.92374 0.91517 0.90510 0.89417 0.87122 0.89183 0.87877 0.90504 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.15 10.56 113.37 1.20 1.34 16 2 O -0.33 -3.79 6.64 -43.65 -0.29 -4.08 16 3 C 0.45 4.67 6.45 71.24 0.46 5.13 16 4 O -0.53 -7.41 15.92 21.95 0.35 -7.06 16 5 C 0.19 0.77 0.62 2.58 0.00 0.78 16 6 N -0.70 -2.28 3.47 -430.57 -1.49 -3.77 16 7 C 0.60 4.85 5.44 86.75 0.47 5.32 16 8 O -0.52 -6.87 12.26 19.60 0.24 -6.63 16 9 C -0.03 -0.22 7.13 42.45 0.30 0.09 16 10 N -0.26 -0.81 11.67 -48.17 -0.56 -1.37 16 11 N -0.26 0.26 3.70 -355.92 -1.32 -1.05 16 12 C 0.06 -0.52 11.00 127.77 1.41 0.88 16 13 C -0.01 0.01 6.17 41.40 0.26 0.26 16 14 C -0.04 0.25 2.99 71.23 0.21 0.46 16 15 O -0.54 4.46 10.02 -148.98 -1.49 2.96 16 16 Si 1.00 -3.65 26.64 68.60 1.83 -1.82 16 17 H -0.26 0.19 6.87 99.48 0.68 0.87 16 18 H -0.26 0.51 7.11 99.48 0.71 1.21 16 19 H -0.26 0.34 7.11 99.48 0.71 1.05 16 20 C -0.20 -0.86 9.35 22.41 0.21 -0.65 16 21 C -0.12 -0.43 4.14 30.87 0.13 -0.31 16 22 C -0.41 -0.22 4.68 72.39 0.34 0.12 16 23 Si 1.04 -4.68 10.15 68.60 0.70 -3.98 16 24 C -0.41 1.07 5.94 73.17 0.43 1.51 16 25 C -0.13 0.13 5.97 32.04 0.19 0.32 16 26 C -0.12 0.16 6.09 31.79 0.19 0.36 16 27 C -0.42 1.15 5.84 72.91 0.43 1.58 16 28 C -0.41 2.20 4.70 72.45 0.34 2.54 16 29 C -0.10 0.07 4.27 30.92 0.13 0.20 16 30 H 0.12 0.23 8.14 -2.39 -0.02 0.21 16 31 H 0.06 0.32 8.13 -2.39 -0.02 0.30 16 32 H 0.06 0.37 8.13 -2.39 -0.02 0.35 16 33 H 0.42 -0.23 5.91 -92.71 -0.55 -0.78 16 34 H 0.09 -0.90 8.14 -2.39 -0.02 -0.92 16 35 H 0.10 -1.05 8.14 -2.39 -0.02 -1.07 16 36 H 0.14 -1.59 5.00 -2.39 -0.01 -1.60 16 37 H 0.15 -1.25 7.96 -2.39 -0.02 -1.26 16 38 H 0.39 -5.44 8.39 -74.06 -0.62 -6.06 16 39 H 0.16 0.65 6.87 -2.91 -0.02 0.63 16 40 H 0.07 0.63 6.53 -2.39 -0.02 0.61 16 41 H 0.09 0.05 7.75 -2.38 -0.02 0.04 16 42 H 0.09 0.00 7.97 -2.39 -0.02 -0.02 16 43 H 0.07 0.21 6.19 -2.39 -0.01 0.20 16 44 H 0.09 -0.33 8.04 -2.39 -0.02 -0.35 16 45 H 0.07 -0.13 8.04 -2.38 -0.02 -0.14 16 46 H 0.06 -0.05 8.14 -2.39 -0.02 -0.07 16 47 H 0.06 -0.04 8.14 -2.39 -0.02 -0.06 16 48 H 0.06 -0.03 8.14 -2.38 -0.02 -0.05 16 49 H 0.07 -0.15 8.14 -2.39 -0.02 -0.17 16 50 H 0.08 -0.17 8.03 -2.39 -0.02 -0.19 16 51 H 0.09 -0.35 8.03 -2.39 -0.02 -0.37 16 52 H 0.11 -0.88 7.97 -2.39 -0.02 -0.90 16 53 H 0.09 -0.61 5.97 -2.38 -0.01 -0.62 16 54 H 0.10 -0.22 7.76 -2.39 -0.02 -0.24 16 55 H 0.08 0.06 7.87 -2.39 -0.02 0.04 16 Total: 0.00 -21.36 420.45 5.15 -16.21 By element: Atomic # 1 Polarization: -9.83 SS G_CDS: 0.49 Total: -9.34 kcal Atomic # 6 Polarization: 13.23 SS G_CDS: 6.70 Total: 19.94 kcal Atomic # 7 Polarization: -2.82 SS G_CDS: -3.37 Total: -6.20 kcal Atomic # 8 Polarization: -13.62 SS G_CDS: -1.19 Total: -14.81 kcal Atomic # 14 Polarization: -8.32 SS G_CDS: 2.52 Total: -5.80 kcal Total: -21.36 5.15 -16.21 kcal The number of atoms in the molecule is 55 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_18339704_13259642.mol2 55 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -74.052 kcal (2) G-P(sol) polarization free energy of solvation -21.359 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -95.410 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 5.147 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.211 kcal (6) G-S(sol) free energy of system = (1) + (5) -90.263 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.46 seconds