Wall clock time and date at job start Thu Mar 4 2021 14:25:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45202 * 1 3 3 C 1.34226 * 117.00086 * 2 1 4 4 O 1.20823 * 119.99815 * 359.97438 * 3 2 1 5 5 C 1.50697 * 120.00192 * 180.02562 * 3 2 1 6 6 N 1.46499 * 112.85104 * 24.43755 * 5 3 2 7 7 C 1.34780 * 119.99860 * 65.89606 * 6 5 3 8 8 O 1.21572 * 119.99698 * 5.02018 * 7 6 5 9 9 C 1.47712 * 119.99777 * 185.01423 * 7 6 5 10 10 N 1.31800 * 126.51801 * 359.69235 * 9 7 6 11 11 N 1.28476 * 110.07075 * 179.81925 * 10 9 7 12 12 C 1.46500 * 124.88564 * 180.16372 * 11 10 9 13 13 C 1.35030 * 110.22798 * 0.45521 * 11 10 9 14 14 C 1.50704 * 126.38391 * 179.70382 * 13 11 10 15 15 O 1.42894 * 109.47176 * 330.00313 * 14 13 11 16 16 Si 1.86300 * 109.47239 * 210.00138 * 14 13 11 17 17 C 1.35361 * 107.22904 * 359.72786 * 13 11 10 18 18 C 1.53783 * 113.68776 * 253.17401 * 5 3 2 19 19 C 1.53783 * 87.07809 * 220.00742 * 18 5 3 20 20 O 1.42897 * 113.61034 * 270.88013 * 19 18 5 21 21 C 1.53002 * 113.68873 * 139.99354 * 19 18 5 22 22 F 1.39900 * 109.46970 * 200.93329 * 21 19 18 23 23 F 1.39895 * 109.47309 * 320.93227 * 21 19 18 24 24 F 1.39899 * 109.47345 * 80.93672 * 21 19 18 25 25 C 1.53774 * 87.08373 * 25.43002 * 19 18 5 26 26 H 1.08998 * 109.47229 * 299.99912 * 1 2 3 27 27 H 1.08997 * 109.47215 * 60.00786 * 1 2 3 28 28 H 1.09007 * 109.46968 * 180.02562 * 1 2 3 29 29 H 0.97001 * 119.99881 * 245.90342 * 6 5 3 30 30 H 1.09009 * 109.46815 * 270.33971 * 12 11 10 31 31 H 1.09001 * 109.47062 * 30.33353 * 12 11 10 32 32 H 1.08998 * 109.47280 * 150.33693 * 12 11 10 33 33 H 1.08997 * 109.46727 * 89.99984 * 14 13 11 34 34 H 0.96703 * 114.00456 * 179.97438 * 15 14 13 35 35 H 1.48501 * 110.00048 * 59.99959 * 16 14 13 36 36 H 1.48498 * 110.00123 * 181.31998 * 16 14 13 37 37 H 1.08007 * 127.24598 * 179.97438 * 17 13 11 38 38 H 1.08994 * 113.61879 * 105.45491 * 18 5 3 39 39 H 1.09004 * 113.61015 * 334.55039 * 18 5 3 40 40 H 0.96699 * 114.00273 * 277.49509 * 20 19 18 41 41 H 1.09003 * 113.61341 * 89.11391 * 25 19 18 42 42 H 1.08992 * 113.61826 * 220.01730 * 25 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4033 2.2092 -0.0005 5 6 3.5663 1.2748 -0.0006 6 7 4.1986 0.0774 -0.5596 7 6 4.0360 -0.2244 -1.8631 8 8 3.4421 0.5432 -2.5952 9 6 4.5797 -1.4876 -2.4021 10 7 5.2459 -2.4049 -1.7297 11 7 5.5665 -3.3758 -2.5077 12 6 6.3097 -4.5692 -2.0958 13 6 5.1254 -3.1350 -3.7610 14 6 5.3076 -4.0295 -4.9601 15 8 6.5220 -4.7697 -4.8221 16 14 5.3858 -2.9901 -6.5042 17 6 4.4897 -1.9401 -3.7397 18 6 4.1625 1.7140 1.3472 19 6 5.1653 2.5553 0.5401 20 8 6.3551 1.8462 0.1887 21 6 5.4508 3.9275 1.1539 22 9 5.9590 4.7820 0.1697 23 9 4.2660 4.4632 1.6700 24 9 6.3885 3.7920 2.1832 25 6 4.1141 2.5890 -0.5818 26 1 -0.3633 0.5138 0.8900 27 1 -0.3633 0.5137 -0.8900 28 1 -0.3633 -1.0277 0.0005 29 1 4.7341 -0.4984 0.0085 30 1 7.3785 -4.3902 -2.2135 31 1 6.0914 -4.7905 -1.0510 32 1 6.0123 -5.4146 -2.7162 33 1 4.4671 -4.7201 -5.0291 34 1 6.7040 -5.3681 -5.5596 35 1 6.5277 -2.0442 -6.4224 36 1 5.5334 -3.8625 -7.6968 37 1 4.0142 -1.4378 -4.5692 38 1 4.6251 0.9005 1.9059 39 1 3.4801 2.3104 1.9529 40 1 7.0201 1.8216 0.8903 41 1 3.4185 3.4245 -0.5034 42 1 4.5376 2.4818 -1.5803 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_18364788_13259642.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 14:25:07 Heat of formation + Delta-G solvation = -220.800916 kcal Electronic energy + Delta-G solvation = -37290.973750 eV Core-core repulsion = 31633.946348 eV Total energy + Delta-G solvation = -5657.027402 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 380.112 amu Computer time = 1.18 seconds Orbital eigenvalues (eV) -51.30390 -48.83074 -48.78109 -43.81763 -42.67792 -40.76678 -39.81205 -38.04093 -37.69780 -36.60220 -34.66222 -34.06610 -32.69424 -29.93125 -28.67519 -28.29897 -27.60079 -26.75749 -25.67743 -24.41328 -22.56778 -22.19466 -21.24350 -20.69380 -20.19369 -19.60506 -19.53008 -19.08886 -18.59264 -18.41553 -18.04102 -17.66817 -17.42875 -17.33677 -17.25918 -16.36257 -16.09686 -15.91852 -15.69007 -15.63135 -15.55897 -15.21018 -15.15661 -15.00096 -14.94332 -14.89852 -14.78580 -14.63410 -14.46240 -14.15247 -13.98800 -13.74146 -13.64811 -13.58091 -13.32460 -13.16266 -13.00211 -12.76415 -12.41755 -12.39550 -11.90701 -11.88162 -11.84883 -11.58315 -11.40170 -11.00905 -10.49084 -10.10164 -9.85693 -4.88579 0.40607 0.79263 0.81589 1.25573 1.27134 1.49375 1.61177 1.64366 1.79960 1.99196 2.20438 2.26455 2.46038 2.47634 2.65181 2.94760 2.99734 3.19067 3.25001 3.34880 3.55074 3.61197 3.99062 4.08688 4.21250 4.22530 4.27104 4.31623 4.31835 4.40878 4.42166 4.44658 4.51324 4.57745 4.64800 4.68003 4.74256 5.06202 5.18602 5.26483 5.69015 6.22395 6.27722 6.47443 6.51622 6.80178 6.99896 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.354 6.354 3 C 0.472 3.528 4 O -0.518 6.518 5 C 0.166 3.834 6 N -0.671 5.671 7 C 0.617 3.383 8 O -0.554 6.554 9 C -0.035 4.035 10 N -0.259 5.259 11 N -0.262 5.262 12 C 0.088 3.912 13 C 0.026 3.974 14 C -0.044 4.044 15 O -0.553 6.553 16 Si 0.769 3.231 17 C -0.191 4.191 18 C -0.127 4.127 19 C 0.081 3.919 20 O -0.507 6.507 21 C 0.439 3.561 22 F -0.183 7.183 23 F -0.175 7.175 24 F -0.175 7.175 25 C -0.111 4.111 26 H 0.071 0.929 27 H 0.057 0.943 28 H 0.129 0.871 29 H 0.427 0.573 30 H 0.088 0.912 31 H 0.104 0.896 32 H 0.117 0.883 33 H 0.118 0.882 34 H 0.406 0.594 35 H -0.312 1.312 36 H -0.266 1.266 37 H 0.182 0.818 38 H 0.147 0.853 39 H 0.135 0.865 40 H 0.409 0.591 41 H 0.126 0.874 42 H 0.098 0.902 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.797 -9.575 1.265 9.691 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.269 6.269 3 C 0.314 3.686 4 O -0.406 6.406 5 C 0.077 3.923 6 N -0.326 5.326 7 C 0.403 3.597 8 O -0.430 6.430 9 C -0.193 4.193 10 N -0.097 5.097 11 N -0.051 5.051 12 C -0.051 4.051 13 C -0.100 4.100 14 C -0.154 4.154 15 O -0.364 6.364 16 Si 0.672 3.328 17 C -0.219 4.219 18 C -0.165 4.165 19 C 0.037 3.963 20 O -0.317 6.317 21 C 0.384 3.616 22 F -0.164 7.164 23 F -0.156 7.156 24 F -0.157 7.157 25 C -0.149 4.149 26 H 0.089 0.911 27 H 0.075 0.925 28 H 0.147 0.853 29 H 0.266 0.734 30 H 0.107 0.893 31 H 0.123 0.877 32 H 0.135 0.865 33 H 0.136 0.864 34 H 0.259 0.741 35 H -0.240 1.240 36 H -0.191 1.191 37 H 0.199 0.801 38 H 0.165 0.835 39 H 0.153 0.847 40 H 0.262 0.738 41 H 0.144 0.856 42 H 0.117 0.883 Dipole moment (debyes) X Y Z Total from point charges 0.808 -8.641 1.180 8.759 hybrid contribution 0.864 -0.327 -0.056 0.926 sum 1.672 -8.969 1.124 9.192 Atomic orbital electron populations 1.23581 0.74580 1.05740 1.02676 1.86516 1.25055 1.32356 1.83005 1.23719 0.91499 0.81793 0.71589 1.90690 1.66679 1.37085 1.46126 1.20740 0.84701 0.87919 0.98984 1.45086 1.52460 1.25244 1.09778 1.16967 0.77773 0.83387 0.81544 1.90812 1.43247 1.50030 1.58882 1.21526 1.07010 0.96743 0.94000 1.73442 1.15517 0.97779 1.23002 1.45673 1.38312 1.15873 1.05275 1.22490 0.96461 0.82416 1.03744 1.21139 1.03110 0.97858 0.87847 1.24369 0.90633 0.99155 1.01273 1.86460 1.40551 1.59747 1.49666 0.93445 0.87794 0.78753 0.72762 1.21614 1.07000 0.95514 0.97754 1.24090 0.97128 1.01724 0.93533 1.23066 0.88609 0.86638 0.97992 1.86706 1.26485 1.73400 1.45071 1.21115 0.74520 0.89252 0.76680 1.93222 1.87472 1.73528 1.62224 1.93214 1.47111 1.87889 1.87406 1.93207 1.66069 1.95918 1.60459 1.23481 0.95106 0.96672 0.99644 0.91062 0.92459 0.85272 0.73372 0.89332 0.87742 0.86474 0.86413 0.74137 1.24007 1.19097 0.80107 0.83483 0.84731 0.73789 0.85605 0.88339 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.04 10.56 113.37 1.20 1.23 16 2 O -0.35 -2.20 10.23 -51.37 -0.53 -2.73 16 3 C 0.47 3.69 6.58 71.24 0.47 4.16 16 4 O -0.52 -6.43 15.80 21.97 0.35 -6.08 16 5 C 0.17 0.50 1.01 3.38 0.00 0.50 16 6 N -0.67 -1.87 4.42 -426.88 -1.89 -3.75 16 7 C 0.62 5.36 7.33 86.75 0.64 6.00 16 8 O -0.55 -8.06 15.47 -3.94 -0.06 -8.12 16 9 C -0.03 -0.25 7.13 42.46 0.30 0.05 16 10 N -0.26 -1.25 11.68 -48.18 -0.56 -1.82 16 11 N -0.26 -0.49 3.70 -355.92 -1.32 -1.81 16 12 C 0.09 -0.46 10.12 127.77 1.29 0.84 16 13 C 0.03 0.03 6.21 41.40 0.26 0.29 16 14 C -0.04 0.23 2.86 71.24 0.20 0.44 16 15 O -0.55 3.39 10.38 -148.98 -1.55 1.84 16 16 Si 0.77 -2.79 31.23 68.60 2.14 -0.65 16 17 C -0.19 -0.84 9.35 22.41 0.21 -0.63 16 18 C -0.13 0.53 6.64 31.12 0.21 0.74 16 19 C 0.08 -0.08 1.34 -10.27 -0.01 -0.09 16 20 O -0.51 1.36 12.91 -148.98 -1.92 -0.56 16 21 C 0.44 0.59 2.84 71.98 0.20 0.79 16 22 F -0.18 -1.03 17.20 44.97 0.77 -0.26 16 23 F -0.17 -0.54 15.75 44.97 0.71 0.16 16 24 F -0.18 0.04 16.69 44.97 0.75 0.79 16 25 C -0.11 -0.52 6.05 31.12 0.19 -0.33 16 26 H 0.07 0.00 8.13 -2.39 -0.02 -0.02 16 27 H 0.06 0.19 8.13 -2.39 -0.02 0.17 16 28 H 0.13 -0.57 8.14 -2.38 -0.02 -0.59 16 29 H 0.43 -0.64 8.40 -92.71 -0.78 -1.42 16 30 H 0.09 -0.47 8.14 -2.38 -0.02 -0.49 16 31 H 0.10 -0.81 8.14 -2.39 -0.02 -0.83 16 32 H 0.12 -0.96 6.77 -2.39 -0.02 -0.98 16 33 H 0.12 -1.25 7.96 -2.39 -0.02 -1.27 16 34 H 0.41 -5.72 8.74 -74.06 -0.65 -6.37 16 35 H -0.31 -2.13 7.11 99.48 0.71 -1.42 16 36 H -0.27 0.44 7.11 99.48 0.71 1.14 16 37 H 0.18 0.18 7.02 -2.91 -0.02 0.16 16 38 H 0.15 -1.59 8.09 -2.39 -0.02 -1.61 16 39 H 0.13 -0.62 7.14 -2.38 -0.02 -0.64 16 40 H 0.41 -4.28 8.46 -74.06 -0.63 -4.91 16 41 H 0.13 0.72 7.07 -2.39 -0.02 0.70 16 42 H 0.10 0.84 7.20 -2.39 -0.02 0.83 16 Total: 0.00 -27.75 375.24 1.20 -26.55 By element: Atomic # 1 Polarization: -16.70 SS G_CDS: -0.86 Total: -17.56 kcal Atomic # 6 Polarization: 8.83 SS G_CDS: 5.16 Total: 13.98 kcal Atomic # 7 Polarization: -3.61 SS G_CDS: -3.77 Total: -7.38 kcal Atomic # 8 Polarization: -11.94 SS G_CDS: -3.71 Total: -15.64 kcal Atomic # 9 Polarization: -1.54 SS G_CDS: 2.23 Total: 0.70 kcal Atomic # 14 Polarization: -2.79 SS G_CDS: 2.14 Total: -0.65 kcal Total: -27.75 1.20 -26.55 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_18364788_13259642.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -194.250 kcal (2) G-P(sol) polarization free energy of solvation -27.747 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -221.997 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.196 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.551 kcal (6) G-S(sol) free energy of system = (1) + (5) -220.801 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.18 seconds