Wall clock time and date at job start Thu Mar 4 2021 13:38:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 H 1.08992 * 109.47280 * 2 1 4 4 C 1.53002 * 109.46978 * 119.99927 * 2 1 3 5 5 C 1.52997 * 109.46978 * 180.02562 * 4 2 1 6 6 C 1.53006 * 109.47164 * 299.99874 * 5 4 2 7 7 H 1.08998 * 109.46505 * 299.99708 * 6 5 4 8 8 N 1.46500 * 109.47249 * 180.02562 * 6 5 4 9 9 C 1.34770 * 120.00256 * 84.99846 * 8 6 5 10 10 O 1.21572 * 120.00146 * 359.97438 * 9 8 6 11 11 C 1.47712 * 120.00094 * 180.02562 * 9 8 6 12 12 N 1.31810 * 126.51777 * 359.68598 * 11 9 8 13 13 N 1.28466 * 110.07064 * 179.85855 * 12 11 9 14 14 C 1.46501 * 124.88162 * 180.13148 * 13 12 11 15 15 C 1.35025 * 110.23376 * 0.41649 * 13 12 11 16 16 C 1.50709 * 126.38892 * 179.76967 * 15 13 12 17 17 O 1.42893 * 109.46661 * 330.00291 * 16 15 13 18 18 Si 1.86295 * 109.47067 * 210.00096 * 16 15 13 19 19 C 1.35365 * 107.23216 * 359.74868 * 15 13 12 20 20 C 1.52997 * 109.47127 * 59.99836 * 6 5 4 21 21 C 1.52996 * 109.46975 * 239.99465 * 2 1 3 22 22 H 1.09001 * 109.47375 * 180.02562 * 1 2 3 23 23 H 1.09002 * 109.47045 * 300.00240 * 1 2 3 24 24 H 1.09000 * 109.47140 * 60.00147 * 1 2 3 25 25 H 1.09002 * 109.47097 * 299.99801 * 4 2 1 26 26 H 1.09001 * 109.47142 * 59.99766 * 4 2 1 27 27 H 1.09001 * 109.47375 * 59.99908 * 5 4 2 28 28 H 1.09000 * 109.47140 * 179.97438 * 5 4 2 29 29 H 0.97005 * 119.99374 * 264.99912 * 8 6 5 30 30 H 1.08994 * 109.46976 * 270.32787 * 14 13 12 31 31 H 1.09003 * 109.47134 * 30.33073 * 14 13 12 32 32 H 1.09002 * 109.47422 * 150.32738 * 14 13 12 33 33 H 1.09002 * 109.46979 * 90.00167 * 16 15 13 34 34 H 0.96706 * 113.99740 * 179.97438 * 17 16 15 35 35 H 1.48495 * 110.00222 * 298.67922 * 18 16 15 36 36 H 1.48500 * 109.99934 * 60.00106 * 18 16 15 37 37 H 1.08002 * 127.25322 * 180.02562 * 19 15 13 38 38 H 1.09002 * 109.47153 * 180.02562 * 20 6 5 39 39 H 1.09001 * 109.46832 * 60.00321 * 20 6 5 40 40 H 1.09004 * 109.47368 * 60.00217 * 21 2 1 41 41 H 1.09001 * 109.47372 * 300.00372 * 21 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0276 0.0000 4 6 2.0399 -0.7212 1.2493 5 6 3.5699 -0.7207 1.2496 6 6 4.0805 -1.4416 0.0003 7 1 3.7175 -2.4694 0.0003 8 7 5.5455 -1.4416 0.0009 9 6 6.2191 -2.3979 0.6704 10 8 5.6110 -3.2602 1.2743 11 6 7.6962 -2.3975 0.6715 12 7 8.4808 -1.5326 0.0601 13 7 9.7128 -1.8275 0.2735 14 6 10.8568 -1.0779 -0.2515 15 6 9.8017 -2.9313 1.0461 16 6 11.0712 -3.5962 1.5126 17 8 12.1017 -3.3871 0.5451 18 14 10.7751 -5.4238 1.7195 19 6 8.5380 -3.3291 1.3240 20 6 3.5704 -0.7205 -1.2489 21 6 2.0399 -0.7214 -1.2492 22 1 -0.3634 -1.0277 0.0005 23 1 -0.3633 0.5139 0.8900 24 1 -0.3633 0.5138 -0.8900 25 1 1.6766 -0.2074 2.1393 26 1 1.6766 -1.7489 1.2493 27 1 3.9329 0.3071 1.2498 28 1 3.9332 -1.2341 2.1398 29 1 6.0306 -0.7533 -0.4806 30 1 11.1402 -1.4813 -1.2236 31 1 10.5847 -0.0279 -0.3591 32 1 11.6966 -1.1667 0.4376 33 1 11.3764 -3.1673 2.4671 34 1 12.9495 -3.7883 0.7804 35 1 9.7277 -5.6557 2.7463 36 1 10.3583 -6.0205 0.4251 37 1 8.2359 -4.1785 1.9188 38 1 3.9338 -1.2343 -2.1389 39 1 3.9335 0.3073 -1.2487 40 1 1.6766 -0.2076 -2.1392 41 1 1.6765 -1.7490 -1.2491 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_4279154_13259642.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:38:21 Heat of formation + Delta-G solvation = -4.436909 kcal Electronic energy + Delta-G solvation = -22199.898808 eV Core-core repulsion = 18889.350679 eV Total energy + Delta-G solvation = -3310.548130 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 280.157 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -43.98717 -41.10426 -39.33069 -37.90166 -35.84247 -34.56956 -33.03117 -32.05364 -31.81991 -28.74371 -27.17913 -26.48877 -24.38228 -23.78140 -22.38607 -22.06343 -21.21878 -20.49185 -18.70337 -18.40233 -17.71011 -17.50627 -17.34483 -16.28338 -15.97304 -15.71952 -15.35880 -15.25412 -15.24012 -15.13558 -14.85397 -14.29433 -14.04601 -13.72434 -13.68749 -13.46673 -13.27640 -13.18640 -13.02014 -12.59033 -12.20021 -12.15517 -12.11900 -11.99861 -11.82167 -11.42756 -11.26277 -11.13523 -10.95138 -10.42432 -10.14464 -9.96601 -5.04215 0.27672 0.64025 1.16927 1.50682 1.65765 1.96541 2.03873 2.12152 3.00998 3.10146 3.50478 3.58457 3.67002 3.81512 3.94362 4.04386 4.13091 4.20582 4.28970 4.31719 4.35349 4.39005 4.41357 4.46418 4.47335 4.51592 4.68139 4.73964 4.75633 4.91928 4.94549 5.00323 5.03472 5.07924 5.13648 5.17386 5.29569 5.35935 5.39064 5.52216 5.55558 6.24891 6.65860 6.82571 6.96698 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C -0.091 4.091 3 H 0.077 0.923 4 C -0.109 4.109 5 C -0.124 4.124 6 C 0.144 3.856 7 H 0.068 0.932 8 N -0.701 5.701 9 C 0.603 3.397 10 O -0.571 6.571 11 C -0.037 4.037 12 N -0.260 5.260 13 N -0.257 5.257 14 C 0.086 3.914 15 C 0.030 3.970 16 C -0.043 4.043 17 O -0.558 6.558 18 Si 0.811 3.189 19 C -0.218 4.218 20 C -0.119 4.119 21 C -0.109 4.109 22 H 0.051 0.949 23 H 0.056 0.944 24 H 0.061 0.939 25 H 0.069 0.931 26 H 0.057 0.943 27 H 0.074 0.926 28 H 0.043 0.957 29 H 0.415 0.585 30 H 0.094 0.906 31 H 0.103 0.897 32 H 0.125 0.875 33 H 0.119 0.881 34 H 0.416 0.584 35 H -0.294 1.294 36 H -0.312 1.312 37 H 0.154 0.846 38 H 0.072 0.928 39 H 0.083 0.917 40 H 0.081 0.919 41 H 0.060 0.940 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.481 3.033 -0.598 8.095 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.206 4.206 2 C -0.110 4.110 3 H 0.095 0.905 4 C -0.147 4.147 5 C -0.163 4.163 6 C 0.040 3.960 7 H 0.086 0.914 8 N -0.351 5.351 9 C 0.388 3.612 10 O -0.448 6.448 11 C -0.195 4.195 12 N -0.098 5.098 13 N -0.046 5.046 14 C -0.053 4.053 15 C -0.096 4.096 16 C -0.153 4.153 17 O -0.369 6.369 18 Si 0.717 3.283 19 C -0.246 4.246 20 C -0.157 4.157 21 C -0.147 4.147 22 H 0.071 0.929 23 H 0.075 0.925 24 H 0.080 0.920 25 H 0.088 0.912 26 H 0.075 0.925 27 H 0.092 0.908 28 H 0.062 0.938 29 H 0.252 0.748 30 H 0.113 0.887 31 H 0.122 0.878 32 H 0.143 0.857 33 H 0.137 0.863 34 H 0.270 0.730 35 H -0.222 1.222 36 H -0.240 1.240 37 H 0.172 0.828 38 H 0.091 0.909 39 H 0.101 0.899 40 H 0.099 0.901 41 H 0.079 0.921 Dipole moment (debyes) X Y Z Total from point charges 6.105 3.145 -1.264 6.982 hybrid contribution -0.275 -0.156 0.310 0.442 sum 5.830 2.989 -0.954 6.621 Atomic orbital electron populations 1.21825 0.94694 1.01883 1.02150 1.21162 0.95904 0.99761 0.94132 0.90469 1.21546 0.93630 1.00891 0.98681 1.21862 0.96778 1.00776 0.96859 1.21128 0.77793 1.00378 0.96652 0.91378 1.45881 1.07739 1.29551 1.51952 1.17032 0.84379 0.81285 0.78487 1.90774 1.69166 1.39283 1.45616 1.21779 0.94222 0.98305 1.05233 1.73450 0.90787 1.24315 1.21248 1.45811 1.05182 1.19531 1.34103 1.22612 0.83790 0.96625 1.02225 1.21452 0.96625 0.91542 0.99982 1.24365 0.84955 1.10934 0.95070 1.86352 1.23997 1.80529 1.46044 0.94625 0.85337 0.71815 0.76526 1.21523 0.91269 1.03673 1.08183 1.21780 0.96862 1.01339 0.95679 1.21562 0.93595 1.01132 0.98445 0.92937 0.92525 0.91982 0.91188 0.92465 0.90774 0.93770 0.74830 0.88745 0.87828 0.85665 0.86316 0.73045 1.22213 1.24022 0.82843 0.90908 0.89870 0.90060 0.92125 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.14 9.19 71.98 0.66 0.80 16 2 C -0.09 0.04 2.72 -10.80 -0.03 0.02 16 3 H 0.08 -0.10 8.14 -2.39 -0.02 -0.12 16 4 C -0.11 -0.25 5.20 30.59 0.16 -0.09 16 5 C -0.12 -0.60 5.49 30.60 0.17 -0.43 16 6 C 0.14 0.76 2.45 44.99 0.11 0.87 16 7 H 0.07 0.68 7.57 -2.39 -0.02 0.66 16 8 N -0.70 -5.00 5.07 -445.54 -2.26 -7.27 16 9 C 0.60 8.51 7.79 86.75 0.68 9.18 16 10 O -0.57 -11.94 16.59 -3.94 -0.07 -12.01 16 11 C -0.04 -0.48 7.13 42.46 0.30 -0.17 16 12 N -0.26 -2.34 11.67 -48.17 -0.56 -2.90 16 13 N -0.26 -1.26 3.70 -355.92 -1.32 -2.58 16 14 C 0.09 -0.35 10.12 127.77 1.29 0.94 16 15 C 0.03 0.16 6.21 41.41 0.26 0.42 16 16 C -0.04 0.18 2.87 71.24 0.20 0.39 16 17 O -0.56 4.52 10.37 -148.98 -1.55 2.98 16 18 Si 0.81 -2.27 31.31 68.60 2.15 -0.12 16 19 C -0.22 -2.48 9.35 22.41 0.21 -2.27 16 20 C -0.12 0.03 5.39 30.61 0.17 0.19 16 21 C -0.11 0.10 5.21 30.61 0.16 0.26 16 22 H 0.05 0.00 8.14 -2.39 -0.02 -0.02 16 23 H 0.06 -0.05 8.14 -2.39 -0.02 -0.07 16 24 H 0.06 -0.12 8.14 -2.39 -0.02 -0.14 16 25 H 0.07 0.11 8.14 -2.39 -0.02 0.09 16 26 H 0.06 0.24 8.14 -2.39 -0.02 0.22 16 27 H 0.07 0.21 8.14 -2.39 -0.02 0.19 16 28 H 0.04 0.44 8.14 -2.39 -0.02 0.42 16 29 H 0.41 1.34 8.33 -92.70 -0.77 0.56 16 30 H 0.09 -0.46 8.14 -2.39 -0.02 -0.48 16 31 H 0.10 -0.66 8.14 -2.39 -0.02 -0.68 16 32 H 0.13 -1.01 6.77 -2.39 -0.02 -1.02 16 33 H 0.12 -1.16 7.96 -2.39 -0.02 -1.18 16 34 H 0.42 -7.83 8.74 -74.05 -0.65 -8.48 16 35 H -0.29 -1.33 6.94 99.48 0.69 -0.64 16 36 H -0.31 -2.29 7.11 99.48 0.71 -1.58 16 37 H 0.15 1.85 6.91 -2.91 -0.02 1.83 16 38 H 0.07 -0.02 8.14 -2.39 -0.02 -0.04 16 39 H 0.08 -0.21 8.14 -2.39 -0.02 -0.23 16 40 H 0.08 -0.23 8.14 -2.39 -0.02 -0.25 16 41 H 0.06 0.04 8.14 -2.39 -0.02 0.02 16 Total: 0.00 -23.10 332.17 0.37 -22.73 By element: Atomic # 1 Polarization: -10.58 SS G_CDS: -0.37 Total: -10.94 kcal Atomic # 6 Polarization: 5.77 SS G_CDS: 4.34 Total: 10.11 kcal Atomic # 7 Polarization: -8.60 SS G_CDS: -4.14 Total: -12.74 kcal Atomic # 8 Polarization: -7.42 SS G_CDS: -1.61 Total: -9.03 kcal Atomic # 14 Polarization: -2.27 SS G_CDS: 2.15 Total: -0.12 kcal Total: -23.10 0.37 -22.73 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_4279154_13259642.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 18.294 kcal (2) G-P(sol) polarization free energy of solvation -23.100 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -4.805 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.369 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.731 kcal (6) G-S(sol) free energy of system = (1) + (5) -4.437 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.76 seconds