Wall clock time and date at job start Thu Mar 4 2021 14:25:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46504 * 1 3 3 N 1.28470 * 124.88734 * 2 1 4 4 C 1.31806 * 110.07152 * 179.97438 * 3 2 1 5 5 C 1.47710 * 126.51890 * 179.97438 * 4 3 2 6 6 O 1.21574 * 120.00393 * 180.02562 * 5 4 3 7 7 N 1.34777 * 119.99953 * 0.02562 * 5 4 3 8 8 C 1.46499 * 120.00481 * 179.97438 * 7 5 4 9 9 H 1.09001 * 109.46660 * 325.00498 * 8 7 5 10 10 C 1.53007 * 109.46586 * 85.00262 * 8 7 5 11 11 C 1.52990 * 109.47186 * 60.00529 * 10 8 7 12 12 C 1.52998 * 109.47611 * 59.99821 * 11 10 8 13 13 H 1.08995 * 109.47330 * 59.99799 * 12 11 10 14 14 C 1.52999 * 109.47216 * 180.02562 * 12 11 10 15 15 O 1.42899 * 109.47166 * 294.99229 * 14 12 11 16 16 C 1.53001 * 109.46795 * 299.99832 * 12 11 10 17 17 C 1.52998 * 109.47431 * 204.99963 * 8 7 5 18 18 C 1.41500 * 106.96759 * 0.02562 * 4 3 2 19 19 C 1.35034 * 124.88217 * 179.97438 * 2 1 3 20 20 C 1.50700 * 126.38511 * 359.75938 * 19 2 1 21 21 O 1.42905 * 109.47198 * 329.99587 * 20 19 2 22 22 Si 1.86305 * 109.47171 * 209.99688 * 20 19 2 23 23 H 1.09006 * 109.46643 * 270.02021 * 1 2 3 24 24 H 1.09004 * 109.46929 * 30.01477 * 1 2 3 25 25 H 1.09001 * 109.47321 * 150.02123 * 1 2 3 26 26 H 0.97005 * 120.00024 * 0.02562 * 7 5 4 27 27 H 1.09005 * 109.46726 * 180.02562 * 10 8 7 28 28 H 1.08995 * 109.46986 * 300.00018 * 10 8 7 29 29 H 1.09005 * 109.47389 * 299.99718 * 11 10 8 30 30 H 1.09002 * 109.46905 * 179.97438 * 11 10 8 31 31 H 1.08996 * 109.47258 * 54.99848 * 14 12 11 32 32 H 1.09007 * 109.46975 * 174.99900 * 14 12 11 33 33 H 0.96700 * 114.00183 * 180.02562 * 15 14 12 34 34 H 1.08995 * 109.47679 * 300.00121 * 16 12 11 35 35 H 1.08999 * 109.47236 * 179.97438 * 16 12 11 36 36 H 1.09001 * 109.46417 * 60.00380 * 17 8 7 37 37 H 1.08995 * 109.46856 * 179.97438 * 17 8 7 38 38 H 1.08003 * 127.25198 * 179.97438 * 18 4 3 39 39 H 1.09006 * 109.47401 * 89.99890 * 20 19 2 40 40 H 0.96700 * 114.00031 * 300.00411 * 21 20 19 41 41 H 1.48505 * 109.99601 * 58.68209 * 22 20 19 42 42 H 1.48499 * 109.99922 * 179.97438 * 22 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.1998 1.0538 0.0000 4 6 3.4741 0.7168 0.0006 5 6 4.6274 1.6396 0.0002 6 8 5.7599 1.1974 0.0003 7 7 4.4243 2.9720 -0.0002 8 6 5.5681 3.8874 0.0000 9 1 6.3775 3.4572 0.5898 10 6 6.0453 4.1075 -1.4370 11 6 4.9092 4.7112 -2.2648 12 6 4.4903 6.0508 -1.6558 13 1 5.3413 6.7318 -1.6556 14 6 3.3537 6.6542 -2.4834 15 8 3.8324 6.9676 -3.7928 16 6 4.0131 5.8306 -0.2189 17 6 5.1493 5.2269 0.6091 18 6 3.5272 -0.6972 0.0003 19 6 2.2373 -1.1077 0.0005 20 6 1.7533 -2.5349 0.0062 21 8 0.4977 -2.6094 0.6845 22 14 2.9975 -3.6091 0.8832 23 1 -0.3633 0.0004 1.0277 24 1 -0.3633 0.8899 -0.5141 25 1 -0.3634 -0.8902 -0.5135 26 1 3.5208 3.3249 0.0000 27 1 6.8967 4.7882 -1.4368 28 1 6.3437 3.1532 -1.8709 29 1 4.0581 4.0302 -2.2650 30 1 5.2494 4.8684 -3.2884 31 1 2.5372 5.9360 -2.5572 32 1 2.9955 7.5633 -2.0002 33 1 3.1635 7.3553 -4.3738 34 1 3.1621 5.1496 -0.2189 35 1 3.7150 6.7850 0.2152 36 1 4.8093 5.0700 1.6327 37 1 6.0004 5.9078 0.6096 38 1 4.4108 -1.3183 0.0003 39 1 1.6331 -2.8820 -1.0201 40 1 0.5299 -2.3153 1.6051 41 1 3.1941 -3.1268 2.2739 42 1 2.5316 -5.0190 0.8962 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_7207534_13259642.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 14:25:30 Heat of formation + Delta-G solvation = -48.376656 kcal Electronic energy + Delta-G solvation = -24733.580526 eV Core-core repulsion = 21102.444834 eV Total energy + Delta-G solvation = -3631.135692 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 296.157 amu Computer time = 0.63 seconds Orbital eigenvalues (eV) -43.84921 -41.20883 -39.40269 -38.16998 -37.45946 -34.86877 -34.36672 -32.71579 -31.82619 -31.46401 -28.53172 -26.88748 -26.29861 -24.43531 -23.65991 -22.24384 -22.10295 -21.22028 -20.13100 -19.29078 -18.21985 -17.71584 -17.57525 -17.20715 -16.84334 -16.54694 -16.01871 -15.84229 -15.78580 -15.67557 -15.04141 -14.96992 -14.84308 -14.64941 -14.09002 -13.92889 -13.68552 -13.43293 -13.41301 -13.20113 -13.03870 -12.69209 -12.45259 -12.27922 -12.13872 -12.00461 -11.58008 -11.32492 -11.28116 -11.11406 -11.07754 -10.81863 -10.28920 -9.99018 -9.98046 -4.89459 0.43924 0.81778 1.21798 1.54085 1.66789 1.93634 2.14412 2.31436 3.08822 3.29721 3.31144 3.34659 3.66809 3.72897 3.89485 4.00066 4.06446 4.27950 4.28849 4.34993 4.39334 4.43094 4.44314 4.47502 4.49901 4.51732 4.63922 4.66149 4.68872 4.72850 4.76070 5.01017 5.05675 5.10066 5.15137 5.22576 5.25264 5.39292 5.42978 5.51538 5.66904 6.27069 6.40057 6.81249 6.88659 7.13468 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.078 3.922 2 N -0.264 5.264 3 N -0.265 5.265 4 C -0.041 4.041 5 C 0.602 3.398 6 O -0.566 6.566 7 N -0.699 5.699 8 C 0.145 3.855 9 H 0.078 0.922 10 C -0.128 4.128 11 C -0.101 4.101 12 C -0.086 4.086 13 H 0.074 0.926 14 C 0.077 3.923 15 O -0.596 6.596 16 C -0.110 4.110 17 C -0.119 4.119 18 C -0.188 4.188 19 C -0.013 4.013 20 C -0.043 4.043 21 O -0.537 6.537 22 Si 0.780 3.220 23 H 0.100 0.900 24 H 0.101 0.899 25 H 0.116 0.884 26 H 0.411 0.589 27 H 0.081 0.919 28 H 0.047 0.953 29 H 0.053 0.947 30 H 0.053 0.947 31 H 0.049 0.951 32 H 0.058 0.942 33 H 0.395 0.605 34 H 0.066 0.934 35 H 0.084 0.916 36 H 0.080 0.920 37 H 0.092 0.908 38 H 0.181 0.819 39 H 0.146 0.854 40 H 0.388 0.612 41 H -0.294 1.294 42 H -0.283 1.283 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.519 1.419 0.415 5.713 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.061 4.061 2 N -0.054 5.054 3 N -0.103 5.103 4 C -0.199 4.199 5 C 0.387 3.613 6 O -0.443 6.443 7 N -0.351 5.351 8 C 0.041 3.959 9 H 0.096 0.904 10 C -0.166 4.166 11 C -0.139 4.139 12 C -0.105 4.105 13 H 0.092 0.908 14 C -0.001 4.001 15 O -0.404 6.404 16 C -0.148 4.148 17 C -0.157 4.157 18 C -0.216 4.216 19 C -0.138 4.138 20 C -0.154 4.154 21 O -0.344 6.344 22 Si 0.684 3.316 23 H 0.119 0.881 24 H 0.120 0.880 25 H 0.134 0.866 26 H 0.249 0.751 27 H 0.100 0.900 28 H 0.066 0.934 29 H 0.072 0.928 30 H 0.072 0.928 31 H 0.067 0.933 32 H 0.076 0.924 33 H 0.244 0.756 34 H 0.084 0.916 35 H 0.103 0.897 36 H 0.098 0.902 37 H 0.110 0.890 38 H 0.198 0.802 39 H 0.163 0.837 40 H 0.238 0.762 41 H -0.221 1.221 42 H -0.209 1.209 Dipole moment (debyes) X Y Z Total from point charges -5.071 1.070 0.758 5.238 hybrid contribution -1.188 0.159 0.351 1.249 sum -6.259 1.229 1.109 6.475 Atomic orbital electron populations 1.22612 0.70721 1.06709 1.06047 1.45696 1.08984 1.01890 1.48804 1.73453 1.02703 1.14729 1.19422 1.21852 0.90930 0.94551 1.12532 1.17077 0.86378 0.82238 0.75601 1.90781 1.23786 1.77769 1.51981 1.45923 1.11110 1.04582 1.73509 1.21052 0.88299 0.89976 0.96619 0.90425 1.21887 0.98894 1.00721 0.95113 1.21378 0.97906 0.95921 0.98654 1.21163 0.98269 0.96508 0.94512 0.90792 1.22303 0.95813 0.98870 0.83106 1.86440 1.43268 1.85490 1.25197 1.21502 0.97946 1.02014 0.93322 1.21786 1.00133 0.94363 0.99434 1.21718 0.97470 0.93520 1.08888 1.22172 0.90948 0.92111 1.08554 1.24834 0.93519 0.91998 1.05025 1.86580 1.29360 1.88468 1.30031 0.93219 0.83958 0.74859 0.79610 0.88111 0.88005 0.86551 0.75145 0.90038 0.93409 0.92817 0.92775 0.93306 0.92361 0.75601 0.91565 0.89698 0.90173 0.88988 0.80226 0.83694 0.76201 1.22100 1.20949 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 -0.52 10.12 127.77 1.29 0.77 16 2 N -0.26 -0.15 3.70 -355.90 -1.32 -1.47 16 3 N -0.27 -1.24 11.67 -48.18 -0.56 -1.80 16 4 C -0.04 -0.30 7.13 42.46 0.30 0.00 16 5 C 0.60 5.73 7.79 86.75 0.68 6.41 16 6 O -0.57 -8.90 16.59 -3.95 -0.07 -8.97 16 7 N -0.70 -2.66 4.23 -445.52 -1.88 -4.55 16 8 C 0.14 0.34 2.78 44.99 0.13 0.46 16 9 H 0.08 0.43 7.58 -2.39 -0.02 0.41 16 10 C -0.13 -0.46 5.60 30.59 0.17 -0.29 16 11 C -0.10 -0.29 4.94 30.59 0.15 -0.13 16 12 C -0.09 0.06 2.43 -10.79 -0.03 0.03 16 13 H 0.07 0.06 8.14 -2.39 -0.02 0.04 16 14 C 0.08 -0.11 6.43 71.98 0.46 0.35 16 15 O -0.60 -1.08 13.20 -148.98 -1.97 -3.04 16 16 C -0.11 0.46 5.03 30.59 0.15 0.61 16 17 C -0.12 0.37 5.61 30.59 0.17 0.54 16 18 C -0.19 -0.75 9.34 22.41 0.21 -0.54 16 19 C -0.01 0.00 6.18 41.40 0.26 0.25 16 20 C -0.04 0.19 2.87 71.24 0.20 0.39 16 21 O -0.54 2.48 10.41 -148.98 -1.55 0.93 16 22 Si 0.78 -2.55 31.23 68.60 2.14 -0.41 16 23 H 0.10 -0.98 8.14 -2.38 -0.02 -1.00 16 24 H 0.10 -0.82 8.14 -2.38 -0.02 -0.84 16 25 H 0.12 -0.95 6.79 -2.39 -0.02 -0.96 16 26 H 0.41 0.38 6.59 -92.70 -0.61 -0.24 16 27 H 0.08 0.16 8.14 -2.38 -0.02 0.14 16 28 H 0.05 0.40 8.14 -2.39 -0.02 0.38 16 29 H 0.05 0.21 7.60 -2.38 -0.02 0.19 16 30 H 0.05 0.34 7.82 -2.39 -0.02 0.32 16 31 H 0.05 -0.12 8.14 -2.39 -0.02 -0.14 16 32 H 0.06 -0.24 8.14 -2.38 -0.02 -0.26 16 33 H 0.39 -2.52 9.12 -74.06 -0.68 -3.20 16 34 H 0.07 -0.30 6.51 -2.39 -0.02 -0.31 16 35 H 0.08 -0.54 8.14 -2.39 -0.02 -0.56 16 36 H 0.08 -0.31 8.14 -2.39 -0.02 -0.33 16 37 H 0.09 -0.41 8.14 -2.39 -0.02 -0.43 16 38 H 0.18 0.16 7.02 -2.91 -0.02 0.14 16 39 H 0.15 -1.04 7.96 -2.38 -0.02 -1.06 16 40 H 0.39 -3.49 8.70 -74.06 -0.64 -4.13 16 41 H -0.29 -0.95 7.11 99.48 0.71 -0.25 16 42 H -0.28 -0.68 7.11 99.48 0.71 0.03 16 Total: 0.00 -20.60 338.60 -1.89 -22.48 By element: Atomic # 1 Polarization: -11.21 SS G_CDS: -0.84 Total: -12.05 kcal Atomic # 6 Polarization: 4.71 SS G_CDS: 4.15 Total: 8.86 kcal Atomic # 7 Polarization: -4.05 SS G_CDS: -3.76 Total: -7.81 kcal Atomic # 8 Polarization: -7.50 SS G_CDS: -3.58 Total: -11.08 kcal Atomic # 14 Polarization: -2.55 SS G_CDS: 2.14 Total: -0.41 kcal Total: -20.60 -1.89 -22.48 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_7207534_13259642.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -25.892 kcal (2) G-P(sol) polarization free energy of solvation -20.595 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -46.487 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.889 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.485 kcal (6) G-S(sol) free energy of system = (1) + (5) -48.377 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.63 seconds