Wall clock time and date at job start Thu Mar 4 2021 13:31:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46501 * 1 3 3 N 1.28466 * 124.88741 * 2 1 4 4 C 1.31818 * 110.07438 * 180.30560 * 3 2 1 5 5 C 1.47702 * 126.52050 * 179.71962 * 4 3 2 6 6 O 1.21566 * 120.00222 * 179.97438 * 5 4 3 7 7 N 1.34782 * 119.99831 * 359.97438 * 5 4 3 8 8 C 1.46499 * 119.99785 * 179.97438 * 7 5 4 9 9 H 1.09000 * 112.84953 * 25.33763 * 8 7 5 10 10 C 1.53781 * 113.61373 * 156.52973 * 8 7 5 11 11 C 1.53786 * 87.08195 * 89.11512 * 10 8 7 12 12 H 1.08998 * 113.61603 * 270.80290 * 11 10 8 13 13 C 1.50705 * 113.61236 * 139.97769 * 11 10 8 14 14 C 1.38237 * 119.98919 * 299.72958 * 13 11 10 15 15 C 1.38218 * 120.01096 * 179.77071 * 14 13 11 16 16 C 1.38348 * 119.98504 * 0.52397 * 15 14 13 17 17 Cl 1.73600 * 120.01454 * 179.70579 * 16 15 14 18 18 C 1.38360 * 119.97602 * 359.72860 * 16 15 14 19 19 C 1.38206 * 119.98297 * 359.97438 * 18 16 15 20 20 C 1.53784 * 113.61625 * 254.13611 * 8 7 5 21 21 C 1.41506 * 106.95794 * 359.71834 * 4 3 2 22 22 C 1.35040 * 124.88363 * 179.82211 * 2 1 3 23 23 C 1.50699 * 126.38607 * 359.96944 * 22 2 1 24 24 O 1.42903 * 109.47152 * 329.71480 * 23 22 2 25 25 Si 1.86293 * 109.47431 * 209.71372 * 23 22 2 26 26 H 1.08995 * 109.46999 * 270.17904 * 1 2 3 27 27 H 1.08999 * 109.46411 * 30.17724 * 1 2 3 28 28 H 1.08998 * 109.47068 * 150.17246 * 1 2 3 29 29 H 0.97001 * 119.99853 * 0.02562 * 7 5 4 30 30 H 1.08998 * 113.62079 * 203.66452 * 10 8 7 31 31 H 1.09000 * 113.61212 * 334.56948 * 10 8 7 32 32 H 1.07995 * 119.99104 * 0.02562 * 14 13 11 33 33 H 1.07995 * 120.00551 * 180.25335 * 15 14 13 34 34 H 1.07997 * 120.00742 * 179.97438 * 18 16 15 35 35 H 1.08000 * 119.99160 * 180.02562 * 19 18 16 36 36 H 1.09000 * 113.61059 * 25.43534 * 20 8 7 37 37 H 1.09003 * 113.61344 * 156.33761 * 20 8 7 38 38 H 1.07999 * 127.24325 * 179.97438 * 21 4 3 39 39 H 1.09008 * 109.47393 * 89.70875 * 23 22 2 40 40 H 0.96700 * 114.00311 * 180.02562 * 24 23 22 41 41 H 1.48506 * 109.99973 * 59.99460 * 25 23 22 42 42 H 1.48493 * 110.00375 * 181.31561 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.1998 1.0538 0.0000 4 6 3.4741 0.7168 -0.0066 5 6 4.6274 1.6396 -0.0146 6 8 5.7597 1.1974 -0.0198 7 7 4.4242 2.9720 -0.0163 8 6 5.5680 3.8873 -0.0237 9 1 6.4636 3.4421 -0.4571 10 6 5.2387 5.2802 -0.5860 11 6 4.8578 5.6829 0.8485 12 1 3.8123 5.4940 1.0920 13 6 5.3046 7.0722 1.2244 14 6 6.6486 7.3950 1.2041 15 6 7.0585 8.6705 1.5441 16 6 6.1243 9.6210 1.9152 17 17 6.6390 11.2210 2.3498 18 6 4.7797 9.2959 1.9403 19 6 4.3706 8.0219 1.5942 20 6 5.8151 4.5756 1.3292 21 6 3.5271 -0.6973 -0.0045 22 6 2.2373 -1.1077 0.0034 23 6 1.7534 -2.5349 0.0085 24 8 0.4989 -2.6101 0.6888 25 14 2.9990 -3.6100 0.8822 26 1 -0.3633 0.0032 1.0276 27 1 -0.3632 0.8884 -0.5166 28 1 -0.3633 -0.8915 -0.5111 29 1 3.5206 3.3249 -0.0118 30 1 6.1082 5.8120 -0.9724 31 1 4.3970 5.2837 -1.2785 32 1 7.3781 6.6516 0.9186 33 1 8.1082 8.9237 1.5243 34 1 4.0501 10.0374 2.2304 35 1 3.3210 7.7681 1.6134 36 1 5.4383 4.0106 2.1817 37 1 6.8419 4.9150 1.4654 38 1 4.4107 -1.3183 -0.0088 39 1 1.6313 -2.8809 -1.0180 40 1 0.1271 -3.5018 0.7309 41 1 3.1745 -3.1485 2.2828 42 1 2.5487 -5.0249 0.8663 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_9610464_13259642.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:31:33 Heat of formation + Delta-G solvation = 65.319913 kcal Electronic energy + Delta-G solvation = -26794.413680 eV Core-core repulsion = 22769.723698 eV Total energy + Delta-G solvation = -4024.689983 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 348.103 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -43.81531 -41.53307 -40.26604 -38.85607 -38.05160 -37.35190 -34.74672 -34.22219 -32.74603 -32.07274 -31.48470 -28.60080 -26.88029 -26.69355 -26.09335 -24.42717 -23.76527 -22.49020 -22.16671 -20.93244 -20.14199 -18.64971 -18.49407 -18.25650 -17.58908 -17.43768 -17.02768 -16.52093 -16.37100 -16.09978 -15.76932 -15.51112 -15.26489 -15.02957 -14.73046 -14.61885 -14.50067 -14.32386 -13.99087 -13.76119 -13.54434 -13.46429 -13.35454 -13.23803 -13.01635 -12.61011 -12.43770 -12.41486 -12.01877 -11.86353 -11.75143 -11.60439 -11.32985 -11.21025 -11.02089 -10.28444 -10.03084 -9.98229 -9.87079 -9.49477 -4.88783 0.12291 0.32193 0.43848 0.81333 1.16445 1.27038 1.53578 1.64996 1.98107 2.07677 2.29049 2.59332 2.99558 3.27686 3.45421 3.54203 3.67032 3.71323 3.85316 3.94977 3.96291 4.01859 4.20777 4.29517 4.36537 4.38307 4.40287 4.43681 4.48330 4.63924 4.66454 4.72500 4.73417 4.79343 4.87170 4.90791 5.02810 5.05471 5.14892 5.25536 5.27136 5.27603 5.50890 5.64942 5.69036 5.84039 6.37650 6.50448 6.82555 7.11664 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.088 3.912 2 N -0.265 5.265 3 N -0.267 5.267 4 C -0.039 4.039 5 C 0.608 3.392 6 O -0.562 6.562 7 N -0.691 5.691 8 C 0.114 3.886 9 H 0.095 0.905 10 C -0.122 4.122 11 C -0.067 4.067 12 H 0.108 0.892 13 C -0.067 4.067 14 C -0.107 4.107 15 C -0.117 4.117 16 C -0.055 4.055 17 Cl -0.083 7.083 18 C -0.118 4.118 19 C -0.108 4.108 20 C -0.142 4.142 21 C -0.191 4.191 22 C 0.025 3.975 23 C -0.047 4.047 24 O -0.554 6.554 25 Si 0.774 3.226 26 H 0.087 0.913 27 H 0.103 0.897 28 H 0.117 0.883 29 H 0.415 0.585 30 H 0.108 0.892 31 H 0.085 0.915 32 H 0.150 0.850 33 H 0.141 0.859 34 H 0.140 0.860 35 H 0.148 0.852 36 H 0.064 0.936 37 H 0.105 0.895 38 H 0.184 0.816 39 H 0.118 0.882 40 H 0.406 0.594 41 H -0.312 1.312 42 H -0.266 1.266 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.109 -4.079 -3.344 7.344 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.051 4.051 2 N -0.054 5.054 3 N -0.105 5.105 4 C -0.197 4.197 5 C 0.394 3.606 6 O -0.439 6.439 7 N -0.342 5.342 8 C 0.009 3.991 9 H 0.113 0.887 10 C -0.160 4.160 11 C -0.086 4.086 12 H 0.126 0.874 13 C -0.067 4.067 14 C -0.124 4.124 15 C -0.136 4.136 16 C -0.082 4.082 17 Cl -0.054 7.054 18 C -0.137 4.137 19 C -0.126 4.126 20 C -0.180 4.180 21 C -0.219 4.219 22 C -0.101 4.101 23 C -0.157 4.157 24 O -0.365 6.365 25 Si 0.677 3.323 26 H 0.106 0.894 27 H 0.121 0.879 28 H 0.135 0.865 29 H 0.251 0.749 30 H 0.126 0.874 31 H 0.104 0.896 32 H 0.167 0.833 33 H 0.159 0.841 34 H 0.157 0.843 35 H 0.166 0.834 36 H 0.083 0.917 37 H 0.123 0.877 38 H 0.201 0.799 39 H 0.136 0.864 40 H 0.259 0.741 41 H -0.240 1.240 42 H -0.191 1.191 Dipole moment (debyes) X Y Z Total from point charges -4.876 -3.232 -2.604 6.403 hybrid contribution -0.998 -0.377 0.552 1.201 sum -5.874 -3.609 -2.053 7.193 Atomic orbital electron populations 1.22471 0.70808 1.06458 1.05358 1.45669 1.09079 1.02004 1.48620 1.73440 1.02730 1.14731 1.19579 1.21794 0.90911 0.94393 1.12625 1.16968 0.86275 0.82044 0.75356 1.90785 1.23709 1.77696 1.51716 1.45455 1.10643 1.04459 1.73604 1.21948 0.89646 0.89645 0.97896 0.88655 1.23374 1.03571 0.93325 0.95739 1.21652 1.00391 0.89686 0.96833 0.87423 1.19963 0.93333 0.95652 0.97794 1.21218 0.96179 0.95796 0.99256 1.21263 0.99976 0.92852 0.99459 1.21168 0.95086 0.86967 1.04967 1.98380 1.91243 1.24073 1.91694 1.21261 0.93964 0.98069 1.00397 1.21286 1.00885 0.91940 0.98490 1.23627 1.00988 0.96298 0.97135 1.21645 0.97118 0.93645 1.09503 1.21180 0.90711 0.90388 1.07778 1.24420 0.93702 0.93941 1.03593 1.86461 1.34197 1.36615 1.79270 0.93394 0.84968 0.74895 0.79007 0.89404 0.87860 0.86466 0.74858 0.87364 0.89595 0.83274 0.84138 0.84254 0.83431 0.91720 0.87713 0.79930 0.86448 0.74141 1.24029 1.19119 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.09 -0.39 10.12 127.77 1.29 0.90 16 2 N -0.26 -0.68 3.70 -355.94 -1.32 -2.00 16 3 N -0.27 -1.48 11.67 -48.17 -0.56 -2.04 16 4 C -0.04 -0.29 7.13 42.45 0.30 0.01 16 5 C 0.61 5.14 7.82 86.74 0.68 5.81 16 6 O -0.56 -8.11 16.54 -3.92 -0.06 -8.17 16 7 N -0.69 -1.49 5.26 -443.04 -2.33 -3.82 16 8 C 0.11 -0.03 4.30 45.52 0.20 0.17 16 9 H 0.10 0.27 7.50 -2.39 -0.02 0.25 16 10 C -0.12 0.56 7.29 31.12 0.23 0.78 16 11 C -0.07 0.26 3.87 -10.92 -0.04 0.22 16 12 H 0.11 -0.56 8.09 -2.39 -0.02 -0.58 16 13 C -0.07 0.10 5.29 -19.86 -0.11 0.00 16 14 C -0.11 0.13 8.62 22.26 0.19 0.32 16 15 C -0.12 -0.14 9.83 22.29 0.22 0.08 16 16 C -0.06 -0.18 6.32 22.32 0.14 -0.04 16 17 Cl -0.08 -0.38 28.96 -2.72 -0.08 -0.46 16 18 C -0.12 -0.16 9.83 22.29 0.22 0.06 16 19 C -0.11 0.10 9.71 22.26 0.22 0.32 16 20 C -0.14 0.23 7.27 31.21 0.23 0.46 16 21 C -0.19 -0.86 9.35 22.41 0.21 -0.65 16 22 C 0.02 0.04 6.21 41.40 0.26 0.30 16 23 C -0.05 0.23 2.86 71.24 0.20 0.44 16 24 O -0.55 3.15 10.40 -148.98 -1.55 1.60 16 25 Si 0.77 -2.93 31.23 68.60 2.14 -0.78 16 26 H 0.09 -0.40 8.14 -2.39 -0.02 -0.42 16 27 H 0.10 -0.71 8.14 -2.39 -0.02 -0.73 16 28 H 0.12 -0.88 6.78 -2.39 -0.02 -0.89 16 29 H 0.41 -0.41 8.43 -92.71 -0.78 -1.19 16 30 H 0.11 -0.62 7.73 -2.39 -0.02 -0.64 16 31 H 0.09 -0.46 8.14 -2.39 -0.02 -0.48 16 32 H 0.15 -0.75 6.64 -2.91 -0.02 -0.77 16 33 H 0.14 -0.14 8.06 -2.91 -0.02 -0.16 16 34 H 0.14 -0.11 8.06 -2.91 -0.02 -0.13 16 35 H 0.15 -0.73 8.05 -2.91 -0.02 -0.75 16 36 H 0.06 0.08 8.14 -2.39 -0.02 0.06 16 37 H 0.10 -0.34 6.30 -2.39 -0.02 -0.35 16 38 H 0.18 0.14 7.03 -2.91 -0.02 0.12 16 39 H 0.12 -1.21 7.96 -2.38 -0.02 -1.23 16 40 H 0.41 -5.58 8.74 -74.06 -0.65 -6.23 16 41 H -0.31 -2.06 7.11 99.48 0.71 -1.35 16 42 H -0.27 0.47 7.11 99.48 0.71 1.18 16 Total: 0.00 -21.17 369.75 0.37 -20.80 By element: Atomic # 1 Polarization: -14.00 SS G_CDS: -0.31 Total: -14.31 kcal Atomic # 6 Polarization: 4.75 SS G_CDS: 4.43 Total: 9.18 kcal Atomic # 7 Polarization: -3.65 SS G_CDS: -4.21 Total: -7.86 kcal Atomic # 8 Polarization: -4.96 SS G_CDS: -1.61 Total: -6.57 kcal Atomic # 14 Polarization: -2.93 SS G_CDS: 2.14 Total: -0.78 kcal Atomic # 17 Polarization: -0.38 SS G_CDS: -0.08 Total: -0.46 kcal Total: -21.17 0.37 -20.80 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_9610464_13259642.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 86.121 kcal (2) G-P(sol) polarization free energy of solvation -21.168 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 64.953 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.367 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.801 kcal (6) G-S(sol) free energy of system = (1) + (5) 65.320 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds