Wall clock time and date at job start Thu Mar 4 2021 16:32:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52993 * 1 3 3 N 1.46496 * 109.46945 * 2 1 4 4 C 1.34786 * 120.00056 * 179.97438 * 3 2 1 5 5 O 1.21860 * 119.99871 * 0.02562 * 4 3 2 6 6 C 1.40189 * 119.99903 * 180.02562 * 4 3 2 7 7 S 1.55351 * 119.99667 * 180.02562 * 6 4 3 8 8 O 1.52200 * 102.99999 * 286.87226 * 7 6 4 9 9 C 1.76204 * 103.00111 * 179.97438 * 7 6 4 10 10 C 1.38260 * 119.96084 * 29.97864 * 9 7 6 11 11 C 1.38308 * 120.14588 * 180.02562 * 10 9 7 12 12 C 1.38085 * 120.07007 * 359.74389 * 11 10 9 13 13 C 1.38917 * 119.92632 * 0.50956 * 12 11 10 14 14 N 1.39850 * 120.06889 * 179.77135 * 13 12 11 15 15 C 1.34783 * 119.99410 * 214.81696 * 14 13 12 16 16 O 1.21574 * 120.00365 * 355.38579 * 15 14 13 17 17 C 1.47684 * 119.99388 * 175.37923 * 15 14 13 18 18 N 1.31814 * 126.52609 * 0.02562 * 17 15 14 19 19 N 1.28462 * 110.07542 * 179.97438 * 18 17 15 20 20 C 1.46504 * 124.88547 * 180.02562 * 19 18 17 21 21 C 1.35037 * 110.23466 * 0.02562 * 19 18 17 22 22 C 1.50699 * 126.38752 * 179.97438 * 21 19 18 23 23 O 1.42895 * 109.47321 * 29.99572 * 22 21 19 24 24 Si 1.86295 * 109.47495 * 149.99914 * 22 21 19 25 25 H 1.48497 * 109.47066 * 300.00032 * 24 22 21 26 26 H 1.48503 * 109.47232 * 59.99625 * 24 22 21 27 27 H 1.48492 * 109.47479 * 179.97438 * 24 22 21 28 28 C 1.35372 * 107.22978 * 0.22249 * 21 19 18 29 29 C 1.38122 * 119.96540 * 209.99881 * 9 7 6 30 30 H 1.08998 * 109.47540 * 59.99844 * 1 2 3 31 31 H 1.09003 * 109.47226 * 179.97438 * 1 2 3 32 32 H 1.09002 * 109.47302 * 299.99391 * 1 2 3 33 33 H 1.09007 * 109.47618 * 240.00270 * 2 1 3 34 34 H 1.08998 * 109.47540 * 120.00156 * 2 1 3 35 35 H 0.96994 * 120.00324 * 0.02562 * 3 2 1 36 36 H 1.07998 * 120.00140 * 359.97438 * 6 4 3 37 37 H 1.08007 * 119.93077 * 359.97438 * 10 9 7 38 38 H 1.07996 * 119.96118 * 180.02562 * 11 10 9 39 39 H 1.07994 * 120.03773 * 180.25149 * 12 11 10 40 40 H 0.96999 * 120.00129 * 34.81478 * 14 13 12 41 41 H 1.08993 * 109.46966 * 269.98100 * 20 19 18 42 42 H 1.08996 * 109.47002 * 29.97673 * 20 19 18 43 43 H 1.08998 * 109.46832 * 149.97931 * 20 19 18 44 44 H 1.09005 * 109.46615 * 269.99900 * 22 21 19 45 45 H 0.96692 * 114.00553 * 180.02562 * 23 22 21 46 46 H 1.07992 * 127.25001 * 179.76893 * 28 21 19 47 47 H 1.07998 * 120.04062 * 0.02562 * 29 9 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 7 2.0182 1.3812 0.0000 4 6 3.3434 1.6275 0.0005 5 8 4.1353 0.7013 0.0005 6 6 3.8106 2.9493 0.0011 7 16 5.3379 3.2331 0.0011 8 8 5.7533 2.8719 1.4200 9 6 5.4139 4.9936 0.0011 10 6 4.4071 5.7281 0.5996 11 6 4.4626 7.1101 0.6014 12 6 5.5273 7.7605 0.0095 13 6 6.5379 7.0255 -0.5973 14 7 7.6150 7.6813 -1.2018 15 6 8.1784 7.1682 -2.3135 16 8 7.8062 6.0934 -2.7431 17 6 9.2476 7.9116 -3.0100 18 7 9.7474 9.0798 -2.6592 19 7 10.6632 9.4342 -3.4874 20 6 11.4330 10.6779 -3.4037 21 6 10.8144 8.4956 -4.4464 22 6 11.7857 8.5420 -5.5976 23 8 12.9473 9.2791 -5.2114 24 14 12.2781 6.8072 -6.0651 25 1 12.9206 6.1445 -4.9018 26 1 11.0710 6.0411 -6.4665 27 1 13.2348 6.8529 -7.1999 28 6 9.9268 7.5077 -4.1840 29 6 6.4790 5.6381 -0.5972 30 1 -0.3634 0.5138 -0.8899 31 1 -0.3634 -1.0277 -0.0005 32 1 -0.3634 0.5137 0.8900 33 1 1.8934 -0.5138 -0.8900 34 1 1.8933 -0.5138 0.8899 35 1 1.3879 2.1184 0.0004 36 1 3.1088 3.7701 0.0006 37 1 3.5750 5.2218 1.0661 38 1 3.6748 7.6810 1.0701 39 1 5.5721 8.8395 0.0148 40 1 7.9567 8.5054 -0.8210 41 1 10.9187 11.4617 -3.9597 42 1 11.5289 10.9762 -2.3597 43 1 12.4241 10.5210 -3.8293 44 1 11.3141 9.0284 -6.4515 45 1 13.6169 9.3501 -5.9053 46 1 9.7713 6.6013 -4.7501 47 1 7.2648 5.0638 -1.0652 RHF calculation, no. of doubly occupied orbitals= 70 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_9704022_13259642.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 16:32:35 Heat of formation + Delta-G solvation = -107.871114 kcal Electronic energy + Delta-G solvation = -32903.389869 eV Core-core repulsion = 28178.050125 eV Total energy + Delta-G solvation = -4725.339744 eV No. of doubly occupied orbitals = 70 Molecular weight (most abundant/longest-lived isotopes) = 393.124 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -43.82469 -41.42479 -39.88347 -39.34270 -37.88554 -35.94537 -35.80783 -34.39599 -33.83531 -32.79639 -31.98633 -31.75139 -30.86844 -29.08202 -28.32568 -26.69031 -24.97555 -24.18300 -23.51878 -22.98510 -22.14633 -21.43008 -20.71072 -19.43663 -18.48198 -18.32324 -17.74119 -17.57715 -17.43685 -17.35305 -17.02671 -16.39629 -16.30672 -16.13110 -16.01165 -15.76822 -15.31836 -15.26027 -15.15195 -14.82375 -14.63864 -14.44105 -14.40758 -14.12809 -13.80861 -13.50864 -13.37846 -13.34942 -13.14142 -12.88528 -12.83319 -12.69270 -12.66218 -12.42540 -12.31510 -12.29016 -11.95447 -11.71786 -11.55453 -11.16762 -10.80181 -10.49789 -10.31983 -10.16294 -9.94066 -9.81213 -9.79758 -9.23897 -9.04841 -7.69112 0.03360 0.29362 0.56078 0.80300 1.23016 1.49323 1.61262 1.63847 1.78393 2.00583 2.10084 2.20202 2.68267 2.77326 3.00314 3.07810 3.21468 3.34417 3.59380 3.93905 4.03847 4.10975 4.16000 4.19812 4.25933 4.38268 4.38842 4.41909 4.48613 4.49920 4.52700 4.58197 4.60573 4.66722 4.80046 4.88991 4.96288 5.02835 5.14538 5.19230 5.23208 5.28575 5.34447 5.41330 5.52432 5.73752 5.81076 6.00872 6.03591 6.27800 6.77935 6.84752 7.01356 7.10736 8.06064 Molecular weight = 393.12amu Principal moments of inertia in cm(-1) A = 0.013540 B = 0.001711 C = 0.001576 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2067.501715 B =16361.519970 C =17765.492971 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.143 4.143 2 C 0.115 3.885 3 N -0.754 5.754 4 C 0.587 3.413 5 O -0.681 6.681 6 C -1.091 5.091 7 S 1.477 4.523 8 O -1.017 7.017 9 C -0.417 4.417 10 C -0.103 4.103 11 C -0.113 4.113 12 C -0.111 4.111 13 C 0.124 3.876 14 N -0.645 5.645 15 C 0.600 3.400 16 O -0.540 6.540 17 C -0.035 4.035 18 N -0.262 5.262 19 N -0.254 5.254 20 C 0.068 3.932 21 C 0.031 3.969 22 C -0.039 4.039 23 O -0.555 6.555 24 Si 0.986 3.014 25 H -0.287 1.287 26 H -0.267 1.267 27 H -0.225 1.225 28 C -0.204 4.204 29 C -0.072 4.072 30 H 0.070 0.930 31 H 0.093 0.907 32 H 0.061 0.939 33 H 0.045 0.955 34 H 0.029 0.971 35 H 0.395 0.605 36 H 0.106 0.894 37 H 0.097 0.903 38 H 0.158 0.842 39 H 0.171 0.829 40 H 0.429 0.571 41 H 0.100 0.900 42 H 0.098 0.902 43 H 0.138 0.862 44 H 0.123 0.877 45 H 0.411 0.589 46 H 0.167 0.833 47 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 15.351 24.420 -18.577 34.309 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.201 4.201 2 C -0.009 4.009 3 N -0.406 5.406 4 C 0.395 3.605 5 O -0.578 6.578 6 C -1.224 5.224 7 S 1.684 4.316 8 O -1.013 7.013 9 C -0.514 4.514 10 C -0.122 4.122 11 C -0.133 4.133 12 C -0.131 4.131 13 C 0.029 3.971 14 N -0.292 5.292 15 C 0.387 3.613 16 O -0.415 6.415 17 C -0.193 4.193 18 N -0.101 5.101 19 N -0.043 5.043 20 C -0.069 4.069 21 C -0.095 4.095 22 C -0.150 4.150 23 O -0.367 6.367 24 Si 0.808 3.192 25 H -0.212 1.212 26 H -0.191 1.191 27 H -0.148 1.148 28 C -0.232 4.232 29 C -0.093 4.093 30 H 0.089 0.911 31 H 0.112 0.888 32 H 0.080 0.920 33 H 0.063 0.937 34 H 0.047 0.953 35 H 0.228 0.772 36 H 0.125 0.875 37 H 0.115 0.885 38 H 0.175 0.825 39 H 0.189 0.811 40 H 0.268 0.732 41 H 0.119 0.881 42 H 0.117 0.883 43 H 0.156 0.844 44 H 0.140 0.860 45 H 0.265 0.735 46 H 0.184 0.816 47 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges 16.230 22.604 -17.779 33.022 hybrid contribution -2.141 0.981 1.367 2.723 sum 14.089 23.586 -16.412 32.002 Atomic orbital electron populations 1.21883 0.91213 1.04186 1.02769 1.21171 0.96423 0.83673 0.99622 1.45651 1.06605 1.07823 1.80529 1.15537 0.82007 0.88142 0.74846 1.90553 1.56490 1.48501 1.62223 1.26843 1.20939 1.00854 1.73715 1.65910 0.84194 0.78124 1.03367 1.94352 1.84984 1.81609 1.40390 1.27941 0.99380 1.20905 1.03147 1.21223 0.97670 0.95695 0.97643 1.21341 0.99205 0.93015 0.99696 1.21259 0.91693 1.01184 0.98962 1.17827 0.89892 0.91121 0.98235 1.43078 1.31626 1.28161 1.26289 1.17289 0.80391 0.84212 0.79441 1.90831 1.62391 1.21609 1.66636 1.21359 1.02746 0.95335 0.99827 1.73449 1.04750 1.13998 1.17874 1.45765 1.24551 1.17582 1.16428 1.22922 0.97491 0.80351 1.06154 1.21211 1.01315 0.91056 0.95893 1.24208 0.86666 1.09512 0.94642 1.86227 1.29566 1.75522 1.45405 0.85206 0.80592 0.73694 0.79673 1.21210 1.19118 1.14758 1.21634 1.00225 1.02240 0.99061 1.20882 0.97341 0.93852 0.97258 0.91139 0.88840 0.92022 0.93657 0.95262 0.77177 0.87534 0.88478 0.82486 0.81127 0.73190 0.88120 0.88344 0.84421 0.85988 0.73547 0.81566 0.84441 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -4.07 10.03 71.98 0.72 -3.35 16 2 C 0.12 4.88 6.39 86.38 0.55 5.44 16 3 N -0.75 -38.39 5.54 -473.39 -2.62 -41.01 16 4 C 0.59 37.32 7.50 84.71 0.64 37.96 16 5 O -0.68 -47.80 16.28 -4.86 -0.08 -47.88 16 6 C -1.09 -67.97 8.32 68.29 0.57 -67.40 16 7 S 1.48 88.18 12.78 -56.49 -0.72 87.46 16 8 O -1.02 -75.82 18.25 -148.98 -2.72 -78.53 16 9 C -0.42 -21.12 5.68 22.25 0.13 -20.99 16 10 C -0.10 -4.79 8.93 22.29 0.20 -4.59 16 11 C -0.11 -3.93 10.04 22.25 0.22 -3.71 16 12 C -0.11 -3.35 9.97 22.40 0.22 -3.12 16 13 C 0.12 4.39 6.30 38.18 0.24 4.63 16 14 N -0.65 -18.73 5.33 -306.22 -1.63 -20.36 16 15 C 0.60 19.35 7.67 86.74 0.67 20.02 16 16 O -0.54 -21.28 14.36 -3.95 -0.06 -21.34 16 17 C -0.04 -0.95 7.13 42.45 0.30 -0.65 16 18 N -0.26 -5.83 11.68 -48.18 -0.56 -6.39 16 19 N -0.25 -4.24 3.70 -355.93 -1.32 -5.55 16 20 C 0.07 0.49 11.00 127.77 1.41 1.90 16 21 C 0.03 0.51 6.21 41.40 0.26 0.76 16 22 C -0.04 -0.26 2.98 71.24 0.21 -0.05 16 23 O -0.56 -1.52 9.76 -148.98 -1.45 -2.98 16 24 Si 0.99 9.56 26.64 68.60 1.83 11.38 16 25 H -0.29 -4.86 7.11 99.48 0.71 -4.15 16 26 H -0.27 -3.76 6.87 99.48 0.68 -3.08 16 27 H -0.23 -1.24 7.11 99.48 0.71 -0.53 16 28 C -0.20 -4.69 9.35 22.42 0.21 -4.48 16 29 C -0.07 -3.17 8.40 22.39 0.19 -2.99 16 30 H 0.07 1.82 8.14 -2.39 -0.02 1.80 16 31 H 0.09 2.12 8.14 -2.39 -0.02 2.10 16 32 H 0.06 1.68 8.14 -2.39 -0.02 1.66 16 33 H 0.05 1.95 8.14 -2.38 -0.02 1.93 16 34 H 0.03 1.33 8.14 -2.39 -0.02 1.31 16 35 H 0.39 17.77 8.42 -92.71 -0.78 16.99 16 36 H 0.11 6.33 6.09 -7.38 -0.04 6.28 16 37 H 0.10 4.92 6.48 -2.91 -0.02 4.90 16 38 H 0.16 4.17 8.06 -2.91 -0.02 4.15 16 39 H 0.17 3.40 8.06 -2.91 -0.02 3.38 16 40 H 0.43 9.48 8.55 -92.71 -0.79 8.69 16 41 H 0.10 0.36 8.14 -2.39 -0.02 0.34 16 42 H 0.10 0.61 8.14 -2.39 -0.02 0.59 16 43 H 0.14 0.62 5.19 -2.39 -0.01 0.60 16 44 H 0.12 0.10 7.96 -2.38 -0.02 0.09 16 45 H 0.41 -2.97 8.74 -74.06 -0.65 -3.62 16 46 H 0.17 3.73 6.87 -2.91 -0.02 3.71 16 47 H 0.14 6.10 6.22 -2.91 -0.02 6.08 16 Total: -1.00 -109.55 408.93 -3.05 -112.60 By element: Atomic # 1 Polarization: 53.67 SS G_CDS: -0.44 Total: 53.23 kcal Atomic # 6 Polarization: -47.35 SS G_CDS: 6.73 Total: -40.62 kcal Atomic # 7 Polarization: -67.19 SS G_CDS: -6.14 Total: -73.33 kcal Atomic # 8 Polarization: -146.42 SS G_CDS: -4.31 Total: -150.73 kcal Atomic # 14 Polarization: 9.56 SS G_CDS: 1.83 Total: 11.38 kcal Atomic # 16 Polarization: 88.18 SS G_CDS: -0.72 Total: 87.46 kcal Total: -109.55 -3.05 -112.60 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_9704022_13259642.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 4.732 kcal (2) G-P(sol) polarization free energy of solvation -109.553 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -104.821 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.050 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -112.603 kcal (6) G-S(sol) free energy of system = (1) + (5) -107.871 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds