Wall clock time and date at job start Thu Mar 4 2021 16:44:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86299 * 109.47060 * 2 1 4 4 C 1.50700 * 109.47111 * 240.00543 * 2 1 3 5 5 C 1.35010 * 126.43073 * 150.04165 * 4 2 1 6 6 N 1.33592 * 108.65334 * 179.97438 * 5 4 2 7 7 C 1.32420 * 109.22375 * 359.97438 * 6 5 4 8 8 C 1.41240 * 132.11522 * 180.02562 * 7 6 5 9 9 Br 1.89099 * 120.25823 * 359.97438 * 8 7 6 10 10 C 1.35706 * 119.49016 * 179.80215 * 8 7 6 11 11 C 1.41765 * 119.53117 * 0.44386 * 10 8 7 12 12 C 1.47572 * 120.01283 * 179.78335 * 11 10 8 13 13 O 1.21591 * 120.00557 * 179.72717 * 12 11 10 14 14 N 1.34781 * 119.99679 * 359.73062 * 12 11 10 15 15 C 1.46504 * 119.99665 * 179.97438 * 14 12 11 16 16 H 1.08999 * 112.85136 * 336.19533 * 15 14 12 17 17 C 1.53779 * 113.61484 * 107.49929 * 15 14 12 18 18 C 1.53785 * 87.08093 * 89.11287 * 17 15 14 19 19 H 1.09002 * 113.61570 * 270.88522 * 18 17 15 20 20 C 1.50701 * 113.69000 * 139.98979 * 18 17 15 21 21 C 1.38233 * 120.00083 * 320.66712 * 20 18 17 22 22 C 1.38239 * 119.99932 * 179.76557 * 21 20 18 23 23 C 1.38232 * 119.99568 * 0.50543 * 22 21 20 24 24 C 1.38236 * 120.00733 * 359.74636 * 23 22 21 25 25 C 1.38236 * 119.99750 * 140.93437 * 20 18 17 26 26 C 1.53781 * 87.08241 * 25.43228 * 18 17 15 27 27 C 1.36499 * 119.97841 * 359.51487 * 11 10 8 28 28 N 1.35946 * 120.50224 * 0.26544 * 27 11 10 29 29 H 0.96699 * 114.00271 * 59.99599 * 1 2 3 30 30 H 1.09004 * 109.47509 * 120.00322 * 2 1 3 31 31 H 1.48505 * 110.00070 * 60.00310 * 3 2 1 32 32 H 1.48495 * 110.00150 * 181.32279 * 3 2 1 33 33 H 1.07996 * 125.67418 * 359.93771 * 5 4 2 34 34 H 1.08003 * 120.23859 * 180.23899 * 10 8 7 35 35 H 0.96996 * 120.00382 * 359.97438 * 14 12 11 36 36 H 1.09003 * 113.61775 * 334.57164 * 17 15 14 37 37 H 1.08996 * 113.61960 * 203.65890 * 17 15 14 38 38 H 1.07999 * 120.00092 * 359.97438 * 21 20 18 39 39 H 1.08001 * 119.99985 * 180.22948 * 22 21 20 40 40 H 1.08008 * 119.99803 * 179.72715 * 23 22 21 41 41 H 1.07992 * 120.00493 * 179.97438 * 24 23 22 42 42 H 1.08003 * 120.00417 * 0.02562 * 25 20 18 43 43 H 1.09005 * 113.61302 * 89.11252 * 26 18 17 44 44 H 1.08996 * 113.61527 * 219.93415 * 26 18 17 45 45 H 1.08000 * 119.74773 * 180.25633 * 27 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 3.0859 -0.4616 -1.8847 6 7 3.1770 -1.2968 -2.9233 7 6 2.1073 -2.0768 -2.9507 8 6 1.7132 -3.1136 -3.8251 9 35 2.8136 -3.5995 -5.2841 10 6 0.5403 -3.7608 -3.6081 11 6 -0.2757 -3.3802 -2.5131 12 6 -1.5555 -4.0735 -2.2701 13 8 -2.2529 -3.7503 -1.3280 14 7 -1.9514 -5.0653 -3.0925 15 6 -3.2217 -5.7540 -2.8509 16 1 -3.5459 -5.6919 -1.8121 17 6 -4.3208 -5.3925 -3.8639 18 6 -3.7957 -6.5510 -4.7282 19 1 -3.0075 -6.2564 -5.4211 20 6 -4.8852 -7.3556 -5.3889 21 6 -6.0490 -7.6406 -4.6994 22 6 -7.0504 -8.3745 -5.3072 23 6 -6.8837 -8.8324 -6.6008 24 6 -5.7178 -8.5519 -7.2885 25 6 -4.7186 -7.8135 -6.6826 26 6 -3.2689 -7.1791 -3.4271 27 6 0.1254 -2.3758 -1.6804 28 7 1.3025 -1.7303 -1.8948 29 1 -0.3934 0.4417 -0.7650 30 1 1.7924 -0.5139 0.8900 31 1 1.5615 2.4679 1.2086 32 1 3.5345 1.7703 -0.0322 33 1 3.8143 0.2883 -1.6138 34 1 0.2290 -4.5580 -4.2669 35 1 -1.3953 -5.3230 -3.8443 36 1 -4.1880 -4.4118 -4.3210 37 1 -5.3312 -5.5518 -3.4874 38 1 -6.1772 -7.2869 -3.6871 39 1 -7.9611 -8.5940 -4.7698 40 1 -7.6643 -9.4096 -7.0741 41 1 -5.5874 -8.9100 -8.2990 42 1 -3.8074 -7.5949 -7.2197 43 1 -3.9918 -7.8268 -2.9310 44 1 -2.2877 -7.6420 -3.5317 45 1 -0.4971 -2.0916 -0.8448 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_9705150_12335884.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 16:44:20 Heat of formation + Delta-G solvation = 95.534144 kcal Electronic energy + Delta-G solvation = -31427.286795 eV Core-core repulsion = 27039.210368 eV Total energy + Delta-G solvation = -4388.076427 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 428.052 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -44.28637 -41.71151 -40.53463 -38.95488 -38.35234 -37.96335 -35.45115 -34.66477 -32.65114 -31.91292 -31.77566 -31.36402 -30.25889 -26.94195 -26.67941 -26.59178 -25.23577 -24.10506 -23.52226 -22.66557 -22.42894 -22.00556 -20.16860 -19.58121 -18.67037 -18.26174 -17.91724 -17.72405 -17.49445 -17.00082 -16.33986 -16.27371 -16.11292 -16.05070 -15.82438 -15.77782 -15.46700 -15.12673 -14.98455 -14.70026 -14.49470 -14.22362 -14.07702 -14.03332 -13.50610 -13.40331 -13.35982 -13.14383 -12.98850 -12.71915 -12.69109 -12.15576 -12.13391 -11.72796 -11.67933 -11.54741 -11.37606 -11.35061 -11.26780 -11.15013 -10.90012 -10.26735 -10.02575 -9.78244 -9.51666 -9.10331 -4.95769 -0.91407 -0.38991 0.18826 0.46503 0.53466 0.95822 1.09848 1.40146 1.65529 1.77261 1.89255 2.00115 2.21491 2.79099 2.86797 3.05882 3.16601 3.35175 3.44085 3.46607 3.49701 3.70901 3.76191 3.82993 3.97984 4.09175 4.10589 4.18514 4.23166 4.27988 4.32555 4.35080 4.40738 4.48710 4.60650 4.66123 4.71046 4.80673 4.85744 4.94647 4.98713 5.04872 5.14717 5.16654 5.21644 5.25099 5.49529 5.55639 5.62303 5.67906 5.77958 6.16156 6.30247 6.41375 6.49980 6.96798 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.553 6.553 2 C -0.044 4.044 3 Si 0.804 3.196 4 C -0.081 4.081 5 C 0.035 3.965 6 N -0.493 5.493 7 C 0.227 3.773 8 C -0.080 4.080 9 Br 0.005 6.995 10 C -0.023 4.023 11 C -0.168 4.168 12 C 0.582 3.418 13 O -0.563 6.563 14 N -0.689 5.689 15 C 0.118 3.882 16 H 0.093 0.907 17 C -0.141 4.141 18 C -0.068 4.068 19 H 0.112 0.888 20 C -0.078 4.078 21 C -0.127 4.127 22 C -0.132 4.132 23 C -0.140 4.140 24 C -0.132 4.132 25 C -0.127 4.127 26 C -0.126 4.126 27 C 0.161 3.839 28 N -0.356 5.356 29 H 0.396 0.604 30 H 0.120 0.880 31 H -0.287 1.287 32 H -0.267 1.267 33 H 0.208 0.792 34 H 0.186 0.814 35 H 0.416 0.584 36 H 0.071 0.929 37 H 0.096 0.904 38 H 0.133 0.867 39 H 0.131 0.869 40 H 0.129 0.871 41 H 0.132 0.868 42 H 0.135 0.865 43 H 0.100 0.900 44 H 0.089 0.911 45 H 0.194 0.806 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.119 -0.593 -2.832 3.586 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.360 6.360 2 C -0.153 4.153 3 Si 0.705 3.295 4 C -0.192 4.192 5 C -0.114 4.114 6 N -0.212 5.212 7 C -0.018 4.018 8 C -0.163 4.163 9 Br 0.091 6.909 10 C -0.049 4.049 11 C -0.176 4.176 12 C 0.368 3.632 13 O -0.442 6.442 14 N -0.341 5.341 15 C 0.013 3.987 16 H 0.111 0.889 17 C -0.180 4.180 18 C -0.086 4.086 19 H 0.130 0.870 20 C -0.078 4.078 21 C -0.145 4.145 22 C -0.150 4.150 23 C -0.157 4.157 24 C -0.150 4.150 25 C -0.145 4.145 26 C -0.164 4.164 27 C 0.035 3.965 28 N -0.029 5.029 29 H 0.246 0.754 30 H 0.137 0.863 31 H -0.214 1.214 32 H -0.192 1.192 33 H 0.224 0.776 34 H 0.203 0.797 35 H 0.254 0.746 36 H 0.089 0.911 37 H 0.115 0.885 38 H 0.150 0.850 39 H 0.149 0.851 40 H 0.147 0.853 41 H 0.150 0.850 42 H 0.153 0.847 43 H 0.118 0.882 44 H 0.108 0.892 45 H 0.211 0.789 Dipole moment (debyes) X Y Z Total from point charges -0.953 -0.247 -2.257 2.463 hybrid contribution -0.602 -0.739 0.689 1.176 sum -1.555 -0.986 -1.568 2.419 Atomic orbital electron populations 1.86484 1.17096 1.81728 1.50734 1.25167 0.85180 1.11428 0.93490 0.93070 0.78609 0.72686 0.85126 1.22358 0.97985 0.96389 1.02429 1.22849 0.96598 1.00213 0.91749 1.70832 1.20079 1.08082 1.22243 1.20706 0.89834 0.99793 0.91490 1.20559 0.98539 0.99207 0.97967 1.96845 1.66763 1.90505 1.36826 1.21358 0.90106 0.97935 0.95459 1.19224 0.98138 1.00993 0.99196 1.17530 0.83926 0.79752 0.81944 1.90853 1.56080 1.65877 1.31416 1.45380 1.22606 1.35186 1.30880 1.21904 0.83469 0.93249 1.00115 0.88851 1.23547 0.99163 0.98672 0.96583 1.21633 0.96227 0.95023 0.95735 0.86957 1.19879 0.95466 0.98192 0.94273 1.21230 0.93620 0.99016 1.00603 1.21421 0.99690 0.98257 0.95599 1.21433 0.98344 1.00595 0.95374 1.21436 0.94085 0.98778 1.00674 1.21341 0.99735 0.98399 0.95058 1.23392 1.03218 0.94821 0.94972 1.22260 0.84984 0.90345 0.98911 1.42706 1.15019 1.24064 1.21119 0.75414 0.86269 1.21378 1.19222 0.77571 0.79737 0.74586 0.91050 0.88544 0.84954 0.85091 0.85261 0.85018 0.84677 0.88166 0.89228 0.78916 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 1.36 10.90 -148.98 -1.62 -0.26 16 2 C -0.04 0.13 3.06 71.24 0.22 0.34 16 3 Si 0.80 -4.45 31.34 68.60 2.15 -2.30 16 4 C -0.08 -0.06 6.24 41.01 0.26 0.20 16 5 C 0.04 0.09 10.44 83.68 0.87 0.96 16 6 N -0.49 -3.80 11.30 -194.11 -2.19 -5.99 16 7 C 0.23 1.25 7.59 134.18 1.02 2.27 16 8 C -0.08 -0.14 6.24 22.42 0.14 0.00 16 9 Br 0.01 0.01 33.72 -20.37 -0.69 -0.68 16 10 C -0.02 0.08 9.26 22.55 0.21 0.29 16 11 C -0.17 0.19 5.84 -20.35 -0.12 0.07 16 12 C 0.58 0.23 7.76 86.71 0.67 0.91 16 13 O -0.56 -4.59 15.87 -4.00 -0.06 -4.65 16 14 N -0.69 3.74 5.21 -443.14 -2.31 1.43 16 15 C 0.12 -0.52 4.32 45.52 0.20 -0.32 16 16 H 0.09 -0.04 7.46 -2.39 -0.02 -0.06 16 17 C -0.14 0.65 7.26 31.12 0.23 0.87 16 18 C -0.07 0.42 3.85 -11.01 -0.04 0.38 16 19 H 0.11 -1.03 8.09 -2.39 -0.02 -1.05 16 20 C -0.08 0.15 5.29 -19.87 -0.11 0.04 16 21 C -0.13 0.12 8.53 22.27 0.19 0.31 16 22 C -0.13 -0.03 10.05 22.27 0.22 0.20 16 23 C -0.14 -0.08 10.05 22.27 0.22 0.14 16 24 C -0.13 0.00 10.05 22.27 0.22 0.22 16 25 C -0.13 0.14 9.71 22.27 0.22 0.36 16 26 C -0.13 0.89 7.29 31.12 0.23 1.11 16 27 C 0.16 0.16 9.91 83.65 0.83 0.99 16 28 N -0.36 -0.95 2.93 -337.71 -0.99 -1.94 16 29 H 0.40 -3.66 8.70 -74.06 -0.64 -4.31 16 30 H 0.12 -0.28 7.96 -2.38 -0.02 -0.30 16 31 H -0.29 -0.38 7.11 99.48 0.71 0.33 16 32 H -0.27 0.65 6.80 99.48 0.68 1.32 16 33 H 0.21 -0.54 6.70 -2.91 -0.02 -0.56 16 34 H 0.19 -2.03 6.44 -2.91 -0.02 -2.04 16 35 H 0.42 -4.65 6.73 -92.71 -0.62 -5.28 16 36 H 0.07 -0.23 8.14 -2.39 -0.02 -0.25 16 37 H 0.10 -0.41 6.41 -2.39 -0.02 -0.42 16 38 H 0.13 -0.51 6.73 -2.91 -0.02 -0.53 16 39 H 0.13 -0.35 8.06 -2.91 -0.02 -0.38 16 40 H 0.13 -0.29 8.06 -2.91 -0.02 -0.31 16 41 H 0.13 -0.40 8.06 -2.91 -0.02 -0.42 16 42 H 0.14 -0.66 8.05 -2.91 -0.02 -0.69 16 43 H 0.10 -0.64 7.62 -2.38 -0.02 -0.66 16 44 H 0.09 -0.79 8.14 -2.39 -0.02 -0.81 16 45 H 0.19 0.24 6.19 -2.91 -0.02 0.22 16 Total: 0.00 -21.02 395.48 -0.23 -21.24 By element: Atomic # 1 Polarization: -16.00 SS G_CDS: -0.18 Total: -16.18 kcal Atomic # 6 Polarization: 3.66 SS G_CDS: 5.68 Total: 9.34 kcal Atomic # 7 Polarization: -1.01 SS G_CDS: -5.50 Total: -6.51 kcal Atomic # 8 Polarization: -3.23 SS G_CDS: -1.69 Total: -4.92 kcal Atomic # 14 Polarization: -4.45 SS G_CDS: 2.15 Total: -2.30 kcal Atomic # 35 Polarization: 0.01 SS G_CDS: -0.69 Total: -0.68 kcal Total: -21.02 -0.23 -21.24 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_9705150_12335884.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 116.779 kcal (2) G-P(sol) polarization free energy of solvation -21.019 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 95.760 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.226 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.245 kcal (6) G-S(sol) free energy of system = (1) + (5) 95.534 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds