Wall clock time and date at job start Thu Mar 4 2021 16:44:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46502 * 1 3 3 N 1.28468 * 124.88288 * 2 1 4 4 C 1.31812 * 110.07061 * 180.02562 * 3 2 1 5 5 C 1.47710 * 126.51255 * 179.97438 * 4 3 2 6 6 O 1.21578 * 119.99902 * 180.02562 * 5 4 3 7 7 N 1.34774 * 120.00439 * 0.02932 * 5 4 3 8 8 C 1.46505 * 120.00182 * 179.97438 * 7 5 4 9 9 H 1.09001 * 112.84604 * 23.80320 * 8 7 5 10 10 C 1.53775 * 113.61692 * 154.99567 * 8 7 5 11 11 C 1.53784 * 87.08257 * 89.11562 * 10 8 7 12 12 H 1.08997 * 113.61149 * 270.80283 * 11 10 8 13 13 C 1.50692 * 113.61520 * 139.98215 * 11 10 8 14 14 C 1.38195 * 119.99594 * 120.00293 * 13 11 10 15 15 C 1.38371 * 119.98964 * 179.72584 * 14 13 11 16 16 Cl 1.73600 * 120.01237 * 180.02562 * 15 14 13 17 17 C 1.38326 * 119.97255 * 359.97438 * 15 14 13 18 18 C 1.38237 * 119.98831 * 0.02562 * 17 15 14 19 19 C 1.38221 * 120.01233 * 0.02562 * 18 17 15 20 20 C 1.53780 * 113.61288 * 252.49437 * 8 7 5 21 21 C 1.41494 * 106.96448 * 0.22624 * 4 3 2 22 22 C 1.35035 * 124.88823 * 180.02562 * 2 1 3 23 23 C 1.50705 * 126.38185 * 0.02562 * 22 2 1 24 24 O 1.42896 * 109.47191 * 330.00498 * 23 22 2 25 25 Si 1.86302 * 109.46927 * 210.00299 * 23 22 2 26 26 H 1.08995 * 109.47160 * 90.02353 * 1 2 3 27 27 H 1.09006 * 109.46407 * 210.02596 * 1 2 3 28 28 H 1.09001 * 109.47137 * 330.01887 * 1 2 3 29 29 H 0.96998 * 119.99873 * 359.97438 * 7 5 4 30 30 H 1.09005 * 113.61620 * 334.57149 * 10 8 7 31 31 H 1.08999 * 113.61999 * 203.66901 * 10 8 7 32 32 H 1.08002 * 120.00463 * 359.70412 * 14 13 11 33 33 H 1.08004 * 120.01013 * 179.97438 * 17 15 14 34 34 H 1.08003 * 119.99824 * 179.97438 * 18 17 15 35 35 H 1.08002 * 119.98422 * 180.02562 * 19 18 17 36 36 H 1.09000 * 113.60806 * 156.33611 * 20 8 7 37 37 H 1.08996 * 113.61573 * 25.43341 * 20 8 7 38 38 H 1.08001 * 127.24560 * 179.75299 * 21 4 3 39 39 H 1.08997 * 109.47118 * 90.00190 * 23 22 2 40 40 H 0.96703 * 114.00090 * 299.99950 * 24 23 22 41 41 H 1.48502 * 109.99820 * 58.68493 * 25 23 22 42 42 H 1.48498 * 109.99759 * 179.97438 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.1997 1.0539 0.0000 4 6 3.4740 0.7169 -0.0006 5 6 4.6272 1.6399 -0.0013 6 8 5.7598 1.1978 -0.0022 7 7 4.4240 2.9723 -0.0008 8 6 5.5679 3.8877 -0.0010 9 1 6.4724 3.4348 -0.4068 10 6 5.2507 5.2698 -0.5960 11 6 4.8394 5.6989 0.8223 12 1 3.7889 5.5143 1.0469 13 6 5.2781 7.0951 1.1816 14 6 4.3370 8.0509 1.5141 15 6 4.7403 9.3314 1.8495 16 17 3.5586 10.5323 2.2680 17 6 6.0854 9.6538 1.8522 18 6 7.0259 8.6969 1.5194 19 6 6.6224 7.4183 1.1834 20 6 5.7844 4.6031 1.3430 21 6 3.5272 -0.6971 -0.0063 22 6 2.2374 -1.1076 -0.0005 23 6 1.7535 -2.5349 -0.0017 24 8 0.4953 -2.6118 0.6713 25 14 2.9943 -3.6120 0.8763 26 1 -0.3633 -0.0004 -1.0276 27 1 -0.3632 -0.8898 0.5143 28 1 -0.3633 0.8902 0.5135 29 1 3.5205 3.3250 -0.0004 30 1 4.4238 5.2601 -1.3062 31 1 6.1283 5.7944 -0.9737 32 1 3.2868 7.7986 1.5119 33 1 6.4009 10.6531 2.1135 34 1 8.0762 8.9485 1.5211 35 1 7.3576 6.6709 0.9239 36 1 6.8080 4.9455 1.4953 37 1 5.3886 4.0553 2.1980 38 1 4.4109 -1.3180 -0.0119 39 1 1.6372 -2.8783 -1.0296 40 1 0.5238 -2.3210 1.5931 41 1 3.1854 -3.1346 2.2695 42 1 2.5284 -5.0220 0.8826 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_9705206_13259642.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 16:44:40 Heat of formation + Delta-G solvation = 67.944195 kcal Electronic energy + Delta-G solvation = -26900.674535 eV Core-core repulsion = 22876.098350 eV Total energy + Delta-G solvation = -4024.576185 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 348.103 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -43.85190 -41.55577 -40.27570 -38.87011 -38.24600 -37.37527 -34.75184 -34.24992 -32.65805 -32.01779 -31.42801 -28.65816 -26.94347 -26.70116 -26.18795 -24.41991 -23.65976 -22.55920 -22.23648 -21.12073 -20.16696 -19.19372 -18.25692 -17.59916 -17.54255 -17.19027 -17.00147 -16.53377 -16.38831 -16.11523 -15.91880 -15.71059 -15.40302 -15.32259 -14.88840 -14.73102 -14.63603 -14.32850 -14.12397 -13.74741 -13.51448 -13.45589 -13.41371 -12.91942 -12.64285 -12.56748 -12.44580 -12.29612 -12.23039 -12.00105 -11.74451 -11.65451 -11.32091 -11.23244 -11.01892 -10.31235 -10.02213 -9.96645 -9.85988 -9.60579 -4.88716 0.16074 0.27849 0.42851 0.81622 1.13952 1.21337 1.54778 1.68045 1.94134 2.08217 2.28477 2.60121 3.02688 3.31756 3.33925 3.44299 3.61916 3.69984 3.87373 3.95152 4.01311 4.11481 4.14337 4.28960 4.30661 4.33954 4.43370 4.43720 4.49061 4.62849 4.66876 4.69057 4.72878 4.77837 4.85987 4.94355 4.97994 5.02187 5.13754 5.25687 5.25975 5.38671 5.48054 5.62411 5.67523 5.84647 6.23852 6.36967 6.80846 7.10659 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.064 3.936 2 N -0.264 5.264 3 N -0.266 5.266 4 C -0.041 4.041 5 C 0.607 3.393 6 O -0.562 6.562 7 N -0.692 5.692 8 C 0.114 3.886 9 H 0.098 0.902 10 C -0.123 4.123 11 C -0.068 4.068 12 H 0.103 0.897 13 C -0.060 4.060 14 C -0.119 4.119 15 C -0.048 4.048 16 Cl -0.082 7.082 17 C -0.127 4.127 18 C -0.106 4.106 19 C -0.115 4.115 20 C -0.139 4.139 21 C -0.186 4.186 22 C -0.014 4.014 23 C -0.045 4.045 24 O -0.536 6.536 25 Si 0.785 3.215 26 H 0.093 0.907 27 H 0.130 0.870 28 H 0.102 0.898 29 H 0.414 0.586 30 H 0.083 0.917 31 H 0.110 0.890 32 H 0.136 0.864 33 H 0.139 0.861 34 H 0.153 0.847 35 H 0.149 0.851 36 H 0.107 0.893 37 H 0.065 0.935 38 H 0.183 0.817 39 H 0.145 0.855 40 H 0.390 0.610 41 H -0.294 1.294 42 H -0.284 1.284 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.476 -1.640 -1.411 2.619 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.075 4.075 2 N -0.054 5.054 3 N -0.104 5.104 4 C -0.199 4.199 5 C 0.393 3.607 6 O -0.439 6.439 7 N -0.342 5.342 8 C 0.009 3.991 9 H 0.116 0.884 10 C -0.161 4.161 11 C -0.087 4.087 12 H 0.121 0.879 13 C -0.060 4.060 14 C -0.138 4.138 15 C -0.075 4.075 16 Cl -0.053 7.053 17 C -0.146 4.146 18 C -0.124 4.124 19 C -0.133 4.133 20 C -0.177 4.177 21 C -0.213 4.213 22 C -0.139 4.139 23 C -0.155 4.155 24 O -0.344 6.344 25 Si 0.688 3.312 26 H 0.111 0.889 27 H 0.148 0.852 28 H 0.121 0.879 29 H 0.250 0.750 30 H 0.101 0.899 31 H 0.128 0.872 32 H 0.154 0.846 33 H 0.157 0.843 34 H 0.171 0.829 35 H 0.167 0.833 36 H 0.126 0.874 37 H 0.084 0.916 38 H 0.200 0.800 39 H 0.163 0.837 40 H 0.240 0.760 41 H -0.220 1.220 42 H -0.210 1.210 Dipole moment (debyes) X Y Z Total from point charges -1.689 -1.656 -1.288 2.693 hybrid contribution -1.113 0.426 0.859 1.469 sum -2.802 -1.230 -0.429 3.090 Atomic orbital electron populations 1.22883 0.70873 1.07607 1.06104 1.45700 1.08944 1.01912 1.48798 1.73461 1.02772 1.14864 1.19336 1.21810 0.90852 0.94534 1.12673 1.17011 0.86372 0.82021 0.75339 1.90790 1.23713 1.77682 1.51715 1.45470 1.10615 1.04544 1.73612 1.21948 0.89756 0.89555 0.97854 0.88435 1.23391 1.03484 0.93526 0.95690 1.21589 1.00366 0.89616 0.97102 0.87869 1.19774 0.93174 0.95016 0.98073 1.21109 1.00962 0.91246 1.00455 1.21127 0.90693 0.91015 1.04623 1.98381 1.58242 1.56646 1.92053 1.21311 0.90864 1.01448 1.00934 1.21434 1.00574 0.92667 0.97698 1.21422 0.95711 0.97175 0.98956 1.23571 1.01095 0.95981 0.97095 1.21725 0.97440 0.93491 1.08680 1.22148 0.91001 0.92090 1.08691 1.24877 0.93247 0.92130 1.05214 1.86557 1.29556 1.88210 1.30105 0.93174 0.83863 0.74704 0.79453 0.88853 0.85206 0.87944 0.74954 0.89873 0.87174 0.84624 0.84305 0.82909 0.83318 0.87432 0.91622 0.79985 0.83719 0.75968 1.22009 1.21039 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.42 11.00 127.77 1.41 0.99 16 2 N -0.26 -0.06 3.70 -355.92 -1.32 -1.38 16 3 N -0.27 -1.06 11.67 -48.18 -0.56 -1.63 16 4 C -0.04 -0.24 7.13 42.45 0.30 0.06 16 5 C 0.61 4.61 7.83 86.75 0.68 5.29 16 6 O -0.56 -7.63 16.53 -3.96 -0.07 -7.69 16 7 N -0.69 -1.18 5.26 -443.03 -2.33 -3.51 16 8 C 0.11 -0.08 4.32 45.51 0.20 0.12 16 9 H 0.10 0.21 7.46 -2.39 -0.02 0.19 16 10 C -0.12 0.55 7.29 31.12 0.23 0.78 16 11 C -0.07 0.24 3.86 -11.02 -0.04 0.20 16 12 H 0.10 -0.43 8.09 -2.39 -0.02 -0.45 16 13 C -0.06 0.07 5.29 -19.87 -0.11 -0.04 16 14 C -0.12 -0.16 9.49 22.29 0.21 0.05 16 15 C -0.05 -0.15 6.32 22.32 0.14 -0.01 16 16 Cl -0.08 -0.35 28.96 -2.72 -0.08 -0.43 16 17 C -0.13 -0.12 9.83 22.29 0.22 0.10 16 18 C -0.11 0.20 10.05 22.27 0.22 0.43 16 19 C -0.11 0.29 8.62 22.27 0.19 0.48 16 20 C -0.14 0.31 7.25 31.12 0.23 0.54 16 21 C -0.19 -0.51 9.35 22.41 0.21 -0.30 16 22 C -0.01 0.01 6.17 41.40 0.26 0.26 16 23 C -0.04 0.22 2.99 71.24 0.21 0.44 16 24 O -0.54 2.82 10.02 -148.98 -1.49 1.33 16 25 Si 0.79 -3.30 31.25 68.60 2.14 -1.15 16 26 H 0.09 -0.71 8.14 -2.39 -0.02 -0.73 16 27 H 0.13 -1.19 5.00 -2.38 -0.01 -1.20 16 28 H 0.10 -0.83 8.14 -2.39 -0.02 -0.85 16 29 H 0.41 -0.47 8.43 -92.71 -0.78 -1.25 16 30 H 0.08 -0.40 8.14 -2.38 -0.02 -0.42 16 31 H 0.11 -0.66 7.73 -2.39 -0.02 -0.68 16 32 H 0.14 -0.05 8.05 -2.91 -0.02 -0.08 16 33 H 0.14 -0.16 8.06 -2.91 -0.02 -0.18 16 34 H 0.15 -0.98 8.06 -2.91 -0.02 -1.00 16 35 H 0.15 -0.98 6.65 -2.91 -0.02 -1.00 16 36 H 0.11 -0.46 6.30 -2.39 -0.02 -0.48 16 37 H 0.06 0.03 8.14 -2.39 -0.02 0.01 16 38 H 0.18 -0.13 7.04 -2.91 -0.02 -0.15 16 39 H 0.15 -1.11 7.96 -2.39 -0.02 -1.13 16 40 H 0.39 -3.89 8.39 -74.06 -0.62 -4.51 16 41 H -0.29 -0.66 7.11 99.48 0.71 0.05 16 42 H -0.28 -0.47 7.11 99.48 0.71 0.24 16 Total: 0.00 -19.27 368.18 0.57 -18.70 By element: Atomic # 1 Polarization: -13.34 SS G_CDS: -0.28 Total: -13.62 kcal Atomic # 6 Polarization: 4.83 SS G_CDS: 4.55 Total: 9.39 kcal Atomic # 7 Polarization: -2.30 SS G_CDS: -4.21 Total: -6.51 kcal Atomic # 8 Polarization: -4.81 SS G_CDS: -1.56 Total: -6.37 kcal Atomic # 14 Polarization: -3.30 SS G_CDS: 2.14 Total: -1.15 kcal Atomic # 17 Polarization: -0.35 SS G_CDS: -0.08 Total: -0.43 kcal Total: -19.27 0.57 -18.70 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_9705206_13259642.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 86.640 kcal (2) G-P(sol) polarization free energy of solvation -19.270 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 67.370 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.574 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.695 kcal (6) G-S(sol) free energy of system = (1) + (5) 67.944 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds