Wall clock time and date at job start Thu Mar 4 2021 12:51:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.38207 * 120.00021 * 2 1 4 4 C 1.50690 * 120.00440 * 359.97438 * 3 2 1 5 5 H 1.09000 * 112.90879 * 348.75234 * 4 3 2 6 6 C 1.53786 * 113.61518 * 119.99887 * 4 3 2 7 7 C 1.53781 * 87.17350 * 140.02616 * 6 4 3 8 8 H 1.09000 * 113.61379 * 219.89528 * 7 6 4 9 9 N 1.46505 * 113.61334 * 89.07333 * 7 6 4 10 10 C 1.34776 * 119.99597 * 154.99978 * 9 7 6 11 11 O 1.21571 * 120.00490 * 0.02562 * 10 9 7 12 12 C 1.47706 * 119.99754 * 180.02562 * 10 9 7 13 13 N 1.31811 * 126.51994 * 359.69290 * 12 10 9 14 14 N 1.28473 * 110.07476 * 179.85533 * 13 12 10 15 15 C 1.46493 * 124.88459 * 180.12631 * 14 13 12 16 16 C 1.35037 * 110.22996 * 0.41661 * 14 13 12 17 17 C 1.50696 * 126.38754 * 179.72929 * 16 14 13 18 18 O 1.42908 * 109.46657 * 330.00043 * 17 16 14 19 19 Si 1.86292 * 109.47383 * 210.00010 * 17 16 14 20 20 C 1.35362 * 107.22540 * 359.74725 * 16 14 13 21 21 C 1.53781 * 87.08070 * 334.52830 * 7 6 4 22 22 C 1.38264 * 119.99486 * 180.25467 * 3 2 1 23 23 C 1.38208 * 120.00154 * 359.53348 * 22 3 2 24 24 C 1.38251 * 120.00088 * 0.39935 * 23 22 3 25 25 C 1.38215 * 119.99838 * 359.85907 * 24 23 22 26 26 H 1.09003 * 109.47231 * 89.99542 * 1 2 3 27 27 H 1.09000 * 109.47603 * 210.00132 * 1 2 3 28 28 H 1.09006 * 109.47061 * 330.00141 * 1 2 3 29 29 H 1.09002 * 113.61357 * 25.43533 * 6 4 3 30 30 H 1.09002 * 113.61608 * 254.61695 * 6 4 3 31 31 H 0.96995 * 120.00170 * 335.00476 * 9 7 6 32 32 H 1.09002 * 109.47758 * 270.33316 * 15 14 13 33 33 H 1.09008 * 109.47521 * 30.32726 * 15 14 13 34 34 H 1.09003 * 109.47459 * 150.32947 * 15 14 13 35 35 H 1.09005 * 109.47140 * 89.99123 * 17 16 14 36 36 H 0.96701 * 113.99900 * 299.99584 * 18 17 16 37 37 H 1.48503 * 110.00092 * 58.67710 * 19 17 16 38 38 H 1.48501 * 110.00246 * 180.02562 * 19 17 16 39 39 H 1.08002 * 127.24515 * 179.97438 * 20 16 14 40 40 H 1.09005 * 113.61471 * 139.98321 * 21 7 6 41 41 H 1.09003 * 113.61469 * 270.88099 * 21 7 6 42 42 H 1.08007 * 119.99780 * 179.72623 * 22 3 2 43 43 H 1.08000 * 120.00118 * 180.23064 * 23 22 3 44 44 H 1.07998 * 120.00465 * 179.82815 * 24 23 22 45 45 H 1.08007 * 120.00016 * 179.97438 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1981 1.1969 0.0000 4 6 1.4447 2.5020 -0.0006 5 1 0.3798 2.3771 -0.1968 6 6 1.7464 3.3880 1.2196 7 6 1.7287 4.5875 0.2575 8 1 2.5018 5.3267 0.4670 9 7 0.4015 5.1845 0.0883 10 6 0.2855 6.4756 -0.2806 11 8 1.2821 7.1447 -0.4734 12 6 -1.0525 7.0777 -0.4506 13 7 -2.2118 6.4735 -0.2819 14 7 -3.1739 7.2938 -0.5097 15 6 -4.5977 6.9626 -0.4142 16 6 -2.6839 8.5036 -0.8561 17 6 -3.4900 9.7279 -1.2055 18 8 -4.7313 9.3298 -1.7912 19 14 -2.5379 10.7731 -2.4185 20 6 -1.3337 8.4112 -0.8313 21 6 2.1057 3.5981 -0.8578 22 6 3.5807 1.1968 -0.0053 23 6 4.2717 -0.0002 -0.0009 24 6 3.5804 -1.1974 0.0005 25 6 2.1983 -1.1974 0.0004 26 1 -0.3634 0.0001 -1.0277 27 1 -0.3634 -0.8899 0.5138 28 1 -0.3633 0.8900 0.5138 29 1 2.7234 3.1999 1.6650 30 1 0.9424 3.4065 1.9554 31 1 -0.3936 4.6507 0.2419 32 1 -4.9515 6.5978 -1.3785 33 1 -4.7412 6.1900 0.3413 34 1 -5.1600 7.8534 -0.1342 35 1 -3.6836 10.3056 -0.3016 36 1 -4.6352 8.8106 -2.6013 37 1 -2.2400 9.9865 -3.6424 38 1 -3.3219 11.9841 -2.7707 39 1 -0.6210 9.1911 -1.0555 40 1 1.5908 3.7855 -1.8001 41 1 3.1809 3.4674 -0.9805 42 1 4.1208 2.1321 -0.0098 43 1 5.3517 -0.0002 -0.0013 44 1 4.1203 -2.1328 0.0012 45 1 1.6582 -2.1327 0.0011 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_9744652_13259642.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 12:51:57 Heat of formation + Delta-G solvation = 68.648108 kcal Electronic energy + Delta-G solvation = -27165.321480 eV Core-core repulsion = 23345.037992 eV Total energy + Delta-G solvation = -3820.283488 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 328.157 amu Computer time = 1.19 seconds Orbital eigenvalues (eV) -43.84961 -41.59444 -40.29111 -38.73251 -38.15829 -34.78557 -34.28484 -33.70274 -32.62490 -31.56189 -28.65873 -27.84230 -26.88088 -26.70650 -26.08613 -24.42532 -22.92445 -22.20822 -21.83981 -21.07937 -20.08112 -19.20965 -17.88946 -17.64317 -17.37745 -17.15875 -16.93676 -16.50847 -16.11593 -15.94168 -15.71876 -15.65158 -15.28694 -14.96560 -14.85404 -14.81633 -14.41537 -14.08403 -13.96635 -13.74254 -13.50259 -13.42233 -13.40556 -13.15764 -12.82597 -12.73233 -12.69026 -12.28401 -12.06347 -12.00189 -11.72497 -11.55994 -11.30950 -11.16572 -11.07973 -10.31002 -10.02364 -9.97857 -9.66901 -9.41862 -4.88884 0.41377 0.44264 0.48813 0.81728 1.22167 1.53699 1.67430 1.93721 2.07023 2.27748 2.80255 3.09088 3.29829 3.34567 3.45933 3.69032 3.72399 3.91989 3.98965 4.02342 4.06855 4.19714 4.25632 4.29374 4.35354 4.43037 4.44138 4.48800 4.58992 4.62192 4.65658 4.69896 4.75494 4.79147 4.81735 4.85134 4.93861 4.99200 5.01126 5.14396 5.20035 5.25259 5.31590 5.50809 5.63504 5.64515 5.67156 5.78435 6.14715 6.27286 6.36712 6.80560 7.09861 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.096 4.096 3 C -0.080 4.080 4 C -0.070 4.070 5 H 0.107 0.893 6 C -0.123 4.123 7 C 0.116 3.884 8 H 0.095 0.905 9 N -0.690 5.690 10 C 0.606 3.394 11 O -0.563 6.563 12 C -0.040 4.040 13 N -0.265 5.265 14 N -0.264 5.264 15 C 0.077 3.923 16 C -0.013 4.013 17 C -0.044 4.044 18 O -0.537 6.537 19 Si 0.782 3.218 20 C -0.187 4.187 21 C -0.140 4.140 22 C -0.122 4.122 23 C -0.136 4.136 24 C -0.133 4.133 25 C -0.134 4.134 26 H 0.072 0.928 27 H 0.071 0.929 28 H 0.076 0.924 29 H 0.104 0.896 30 H 0.083 0.917 31 H 0.414 0.586 32 H 0.100 0.900 33 H 0.102 0.898 34 H 0.117 0.883 35 H 0.146 0.854 36 H 0.388 0.612 37 H -0.295 1.295 38 H -0.284 1.284 39 H 0.182 0.818 40 H 0.064 0.936 41 H 0.100 0.900 42 H 0.134 0.866 43 H 0.134 0.866 44 H 0.132 0.868 45 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.949 -0.787 1.261 4.220 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C -0.096 4.096 3 C -0.080 4.080 4 C -0.088 4.088 5 H 0.125 0.875 6 C -0.161 4.161 7 C 0.011 3.989 8 H 0.113 0.887 9 N -0.341 5.341 10 C 0.392 3.608 11 O -0.440 6.440 12 C -0.198 4.198 13 N -0.103 5.103 14 N -0.053 5.053 15 C -0.061 4.061 16 C -0.138 4.138 17 C -0.154 4.154 18 O -0.345 6.345 19 Si 0.685 3.315 20 C -0.214 4.214 21 C -0.179 4.179 22 C -0.140 4.140 23 C -0.154 4.154 24 C -0.151 4.151 25 C -0.152 4.152 26 H 0.091 0.909 27 H 0.090 0.910 28 H 0.095 0.905 29 H 0.122 0.878 30 H 0.102 0.898 31 H 0.251 0.749 32 H 0.118 0.882 33 H 0.120 0.880 34 H 0.135 0.865 35 H 0.164 0.836 36 H 0.238 0.762 37 H -0.221 1.221 38 H -0.210 1.210 39 H 0.199 0.801 40 H 0.083 0.917 41 H 0.119 0.881 42 H 0.152 0.848 43 H 0.151 0.849 44 H 0.150 0.850 45 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges -4.084 -0.713 1.152 4.302 hybrid contribution -0.571 -0.622 -0.743 1.125 sum -4.655 -1.336 0.409 4.860 Atomic orbital electron populations 1.20883 0.90263 1.03520 1.02748 1.20075 0.97032 0.92771 0.99751 1.19695 0.93700 0.94197 1.00445 1.21659 0.99790 0.90088 0.97224 0.87543 1.23358 1.04132 0.92600 0.96048 1.21912 0.84805 0.94734 0.97464 0.88686 1.45446 1.09479 1.10666 1.68510 1.17033 0.86102 0.81749 0.75910 1.90788 1.38159 1.62573 1.52472 1.21780 0.91789 0.94895 1.11325 1.73461 0.95538 1.21747 1.19510 1.45696 1.08059 1.06403 1.45191 1.22613 0.72406 1.05320 1.05781 1.22177 0.94152 0.90533 1.06935 1.24842 0.88796 0.94967 1.06803 1.86583 1.27904 1.75136 1.44860 0.93219 0.84607 0.76652 0.77032 1.21725 0.94549 0.97240 1.07935 1.23594 1.02097 0.94645 0.97550 1.21225 0.93853 0.98732 1.00210 1.21394 1.00794 0.92615 1.00568 1.21409 0.94611 0.98868 1.00169 1.21296 0.94678 0.98103 1.01095 0.90891 0.90977 0.90504 0.87809 0.89808 0.74911 0.88184 0.87967 0.86511 0.83630 0.76207 1.22144 1.21045 0.80094 0.91721 0.88122 0.84830 0.84854 0.84964 0.85144 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.19 9.33 71.24 0.66 0.85 16 2 C -0.10 -0.23 5.88 -19.87 -0.12 -0.35 16 3 C -0.08 -0.16 5.29 -19.87 -0.11 -0.26 16 4 C -0.07 0.07 3.42 -10.92 -0.04 0.04 16 5 H 0.11 -0.25 6.08 -2.39 -0.01 -0.26 16 6 C -0.12 0.25 7.29 31.12 0.23 0.47 16 7 C 0.12 0.17 4.32 45.52 0.20 0.36 16 8 H 0.10 0.42 7.46 -2.39 -0.02 0.41 16 9 N -0.69 -1.98 5.26 -443.03 -2.33 -4.31 16 10 C 0.61 5.15 7.82 86.75 0.68 5.83 16 11 O -0.56 -8.27 16.53 -3.94 -0.07 -8.34 16 12 C -0.04 -0.26 7.13 42.46 0.30 0.05 16 13 N -0.26 -1.06 11.67 -48.18 -0.56 -1.62 16 14 N -0.26 -0.02 3.70 -355.93 -1.32 -1.34 16 15 C 0.08 -0.54 10.12 127.77 1.29 0.75 16 16 C -0.01 0.01 6.18 41.40 0.26 0.26 16 17 C -0.04 0.21 2.87 71.23 0.20 0.42 16 18 O -0.54 2.63 10.40 -148.98 -1.55 1.08 16 19 Si 0.78 -2.89 31.23 68.60 2.14 -0.74 16 20 C -0.19 -0.59 9.35 22.41 0.21 -0.38 16 21 C -0.14 -0.08 7.26 31.21 0.23 0.15 16 22 C -0.12 -0.24 8.63 22.27 0.19 -0.05 16 23 C -0.14 -0.31 10.05 22.27 0.22 -0.08 16 24 C -0.13 -0.34 10.05 22.27 0.22 -0.11 16 25 C -0.13 -0.36 9.70 22.27 0.22 -0.15 16 26 H 0.07 -0.16 8.14 -2.39 -0.02 -0.17 16 27 H 0.07 -0.20 8.09 -2.39 -0.02 -0.22 16 28 H 0.08 -0.26 6.34 -2.38 -0.02 -0.27 16 29 H 0.10 -0.27 7.73 -2.39 -0.02 -0.28 16 30 H 0.08 -0.26 8.14 -2.39 -0.02 -0.28 16 31 H 0.41 -0.14 8.43 -92.71 -0.78 -0.92 16 32 H 0.10 -0.99 8.14 -2.39 -0.02 -1.01 16 33 H 0.10 -0.85 8.14 -2.38 -0.02 -0.87 16 34 H 0.12 -0.98 6.77 -2.39 -0.02 -1.00 16 35 H 0.15 -1.12 7.96 -2.38 -0.02 -1.14 16 36 H 0.39 -3.58 8.70 -74.06 -0.64 -4.22 16 37 H -0.29 -0.85 7.11 99.48 0.71 -0.15 16 38 H -0.28 -0.60 7.11 99.48 0.71 0.10 16 39 H 0.18 -0.02 7.02 -2.91 -0.02 -0.04 16 40 H 0.06 0.18 8.14 -2.38 -0.02 0.16 16 41 H 0.10 -0.04 6.31 -2.39 -0.02 -0.05 16 42 H 0.13 -0.15 6.65 -2.91 -0.02 -0.17 16 43 H 0.13 -0.15 8.06 -2.91 -0.02 -0.17 16 44 H 0.13 -0.11 8.06 -2.91 -0.02 -0.13 16 45 H 0.13 -0.04 8.06 -2.91 -0.02 -0.07 16 Total: 0.00 -19.03 370.11 0.82 -18.20 By element: Atomic # 1 Polarization: -10.38 SS G_CDS: -0.35 Total: -10.74 kcal Atomic # 6 Polarization: 2.94 SS G_CDS: 4.86 Total: 7.80 kcal Atomic # 7 Polarization: -3.06 SS G_CDS: -4.21 Total: -7.27 kcal Atomic # 8 Polarization: -5.64 SS G_CDS: -1.61 Total: -7.25 kcal Atomic # 14 Polarization: -2.89 SS G_CDS: 2.14 Total: -0.74 kcal Total: -19.03 0.82 -18.20 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_9744652_13259642.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 86.852 kcal (2) G-P(sol) polarization free energy of solvation -19.026 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 67.827 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.822 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.204 kcal (6) G-S(sol) free energy of system = (1) + (5) 68.648 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.19 seconds