Wall clock time and date at job start Thu Mar 4 2021 12:34:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35957 * 116.99964 * 2 1 4 4 C 1.38903 * 120.06412 * 179.97438 * 3 2 1 5 5 F 1.35100 * 120.05054 * 0.03647 * 4 3 2 6 6 C 1.38332 * 119.90417 * 180.02562 * 4 3 2 7 7 C 1.38264 * 120.03076 * 0.02562 * 6 4 3 8 8 C 1.50693 * 119.93418 * 180.02562 * 7 6 4 9 9 H 1.08997 * 112.85325 * 348.79730 * 8 7 6 10 10 C 1.53785 * 113.61586 * 119.99998 * 8 7 6 11 11 C 1.53778 * 87.08260 * 139.97463 * 10 8 7 12 12 H 1.08998 * 113.61595 * 219.93143 * 11 10 8 13 13 N 1.46500 * 113.61357 * 89.11524 * 11 10 8 14 14 C 1.34774 * 120.00069 * 156.52822 * 13 11 10 15 15 O 1.21697 * 120.00184 * 5.20281 * 14 13 11 16 16 C 1.46684 * 120.00100 * 185.20348 * 14 13 11 17 17 C 1.37867 * 126.22994 * 5.64491 * 16 14 13 18 18 C 1.39841 * 107.08134 * 179.72877 * 17 16 14 19 19 C 1.50705 * 126.06573 * 180.27854 * 18 17 16 20 20 O 1.42898 * 109.47112 * 65.18212 * 19 18 17 21 21 Si 1.86306 * 109.46887 * 185.18018 * 19 18 17 22 22 C 1.35448 * 107.86402 * 0.40928 * 18 17 16 23 23 N 1.35530 * 108.87504 * 359.58337 * 22 18 17 24 24 C 1.46495 * 125.67995 * 180.28438 * 23 22 18 25 25 C 1.53776 * 87.17622 * 334.52769 * 11 10 8 26 26 C 1.38261 * 120.12469 * 0.27140 * 7 6 4 27 27 C 1.38182 * 120.09289 * 359.45236 * 26 7 6 28 28 H 1.08998 * 109.47053 * 180.02562 * 1 2 3 29 29 H 1.08996 * 109.47587 * 300.00191 * 1 2 3 30 30 H 1.09002 * 109.47062 * 60.01126 * 1 2 3 31 31 H 1.07998 * 119.98438 * 180.02562 * 6 4 3 32 32 H 1.08999 * 113.60922 * 25.43019 * 10 8 7 33 33 H 1.09002 * 113.68874 * 254.53807 * 10 8 7 34 34 H 0.96997 * 119.99879 * 336.52933 * 13 11 10 35 35 H 1.08001 * 126.46360 * 359.93768 * 17 16 14 36 36 H 1.08992 * 109.47465 * 305.17736 * 19 18 17 37 37 H 0.96700 * 114.00230 * 59.99880 * 20 19 18 38 38 H 1.48496 * 110.00000 * 180.02562 * 21 19 18 39 39 H 1.48504 * 109.99846 * 301.31767 * 21 19 18 40 40 H 1.08002 * 125.56446 * 179.84619 * 22 18 17 41 41 H 1.09005 * 109.47428 * 85.91430 * 24 23 22 42 42 H 1.09004 * 109.46911 * 205.91321 * 24 23 22 43 43 H 1.08994 * 109.47062 * 325.91171 * 24 23 22 44 44 H 1.09001 * 113.62201 * 140.02517 * 25 11 10 45 45 H 1.09002 * 113.61272 * 270.92899 * 25 11 10 46 46 H 1.07991 * 119.95052 * 179.70786 * 26 7 6 47 47 H 1.08000 * 120.01777 * 180.28048 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0462 1.2114 0.0000 4 6 3.4333 1.2857 0.0005 5 9 4.1714 0.1541 0.0003 6 6 4.0578 2.5200 0.0011 7 6 3.3022 3.6778 0.0016 8 6 3.9848 5.0213 0.0016 9 1 5.0550 4.9523 0.1963 10 6 3.6353 5.8899 -1.2184 11 6 3.5890 7.0869 -0.2541 12 1 2.7768 7.7835 -0.4615 13 7 4.8820 7.7548 -0.0853 14 6 4.9290 9.0407 0.3156 15 8 3.9045 9.6184 0.6283 16 6 6.2149 9.7439 0.3749 17 6 7.4317 9.2543 -0.0498 18 6 8.3815 10.2531 0.1867 19 6 9.8536 10.1691 -0.1246 20 8 10.0372 10.0821 -1.5391 21 14 10.7126 11.6912 0.5206 22 6 7.7440 11.3082 0.7479 23 7 6.4264 11.0130 0.8644 24 6 5.3983 11.8973 1.4186 25 6 3.2663 6.0787 0.8612 26 6 1.9215 3.6054 0.0073 27 6 1.2922 2.3751 0.0010 28 1 -0.3633 -1.0277 0.0005 29 1 -0.3634 0.5138 0.8899 30 1 -0.3633 0.5137 -0.8901 31 1 5.1362 2.5792 0.0011 32 1 2.6695 5.6498 -1.6629 33 1 4.4364 5.9531 -1.9549 34 1 5.7042 7.2715 -0.2620 35 1 7.6161 8.2839 -0.4864 36 1 10.2758 9.2843 0.3516 37 1 9.6847 10.8378 -2.0287 38 1 12.1650 11.6209 0.2194 39 1 10.1245 12.9067 -0.0974 40 1 8.2089 12.2353 1.0491 41 1 5.0245 12.5561 0.6346 42 1 4.5771 11.2981 1.8118 43 1 5.8283 12.4958 2.2216 44 1 3.7704 6.2935 1.8035 45 1 2.1998 5.8901 0.9841 46 1 1.3341 4.5115 0.0124 47 1 0.2136 2.3200 0.0009 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_9824364_10803934.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 12:34:46 Heat of formation + Delta-G solvation = -37.087131 kcal Electronic energy + Delta-G solvation = -31230.078698 eV Core-core repulsion = 26682.499929 eV Total energy + Delta-G solvation = -4547.578768 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 361.152 amu Computer time = 1.25 seconds Orbital eigenvalues (eV) -49.87424 -42.56532 -41.53626 -40.68363 -39.49275 -37.96736 -37.74436 -34.79709 -33.70111 -31.86266 -31.49073 -30.52881 -28.44808 -28.25244 -26.66740 -26.09387 -25.57925 -24.16900 -23.65180 -22.54649 -21.29009 -20.66507 -20.09643 -19.40721 -18.85153 -18.11113 -17.82947 -17.55521 -17.19201 -17.02627 -16.82309 -16.61331 -16.25912 -16.09288 -15.92277 -15.74267 -15.61781 -15.37054 -15.24707 -15.07975 -14.83400 -14.42519 -14.06654 -14.00949 -13.72481 -13.62455 -13.45859 -13.36991 -13.24076 -13.14539 -13.04478 -12.96941 -12.43315 -12.35199 -12.19577 -11.81728 -11.77993 -11.47818 -11.26809 -11.16445 -10.44432 -10.17312 -9.96440 -9.69746 -9.26766 -9.11966 -4.84966 0.08706 0.16942 0.40612 1.40245 1.55984 1.58623 1.67959 2.04910 2.18157 2.27007 2.31585 2.46738 3.17478 3.46432 3.56453 3.59058 3.67701 3.74869 3.77696 3.85578 3.96256 4.03174 4.04853 4.17091 4.22482 4.24517 4.33221 4.33770 4.37431 4.41301 4.51732 4.62555 4.68909 4.73196 4.74497 4.79818 4.80622 4.83950 4.89938 4.91682 5.04035 5.08310 5.16685 5.17709 5.21345 5.44733 5.61409 5.64171 5.70181 5.89819 6.16815 6.25684 6.46131 6.62151 7.11606 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.340 6.340 3 C 0.074 3.926 4 C 0.035 3.965 5 F -0.152 7.152 6 C -0.113 4.113 7 C -0.078 4.078 8 C -0.063 4.063 9 H 0.110 0.890 10 C -0.125 4.125 11 C 0.119 3.881 12 H 0.091 0.909 13 N -0.690 5.690 14 C 0.590 3.410 15 O -0.581 6.581 16 C -0.078 4.078 17 C -0.111 4.111 18 C -0.216 4.216 19 C -0.045 4.045 20 O -0.552 6.552 21 Si 0.766 3.234 22 C 0.034 3.966 23 N -0.412 5.412 24 C 0.061 3.939 25 C -0.140 4.140 26 C -0.081 4.081 27 C -0.177 4.177 28 H 0.114 0.886 29 H 0.070 0.930 30 H 0.071 0.929 31 H 0.154 0.846 32 H 0.108 0.892 33 H 0.086 0.914 34 H 0.415 0.585 35 H 0.158 0.842 36 H 0.120 0.880 37 H 0.383 0.617 38 H -0.309 1.309 39 H -0.280 1.280 40 H 0.197 0.803 41 H 0.080 0.920 42 H 0.087 0.913 43 H 0.113 0.887 44 H 0.067 0.933 45 H 0.105 0.895 46 H 0.158 0.842 47 H 0.160 0.840 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.232 3.420 1.855 4.486 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.254 6.254 3 C 0.028 3.972 4 C 0.015 3.985 5 F -0.131 7.131 6 C -0.132 4.132 7 C -0.078 4.078 8 C -0.081 4.081 9 H 0.129 0.871 10 C -0.162 4.162 11 C 0.013 3.987 12 H 0.109 0.891 13 N -0.341 5.341 14 C 0.379 3.621 15 O -0.463 6.463 16 C -0.191 4.191 17 C -0.137 4.137 18 C -0.222 4.222 19 C -0.155 4.155 20 O -0.360 6.360 21 Si 0.672 3.328 22 C -0.104 4.104 23 N -0.084 5.084 24 C -0.080 4.080 25 C -0.178 4.178 26 C -0.099 4.099 27 C -0.196 4.196 28 H 0.132 0.868 29 H 0.089 0.911 30 H 0.090 0.910 31 H 0.171 0.829 32 H 0.126 0.874 33 H 0.105 0.895 34 H 0.252 0.748 35 H 0.176 0.824 36 H 0.138 0.862 37 H 0.232 0.768 38 H -0.237 1.237 39 H -0.207 1.207 40 H 0.214 0.786 41 H 0.099 0.901 42 H 0.106 0.894 43 H 0.132 0.868 44 H 0.085 0.915 45 H 0.123 0.877 46 H 0.176 0.824 47 H 0.178 0.822 Dipole moment (debyes) X Y Z Total from point charges -2.450 3.933 2.172 5.118 hybrid contribution -0.041 -0.566 -1.252 1.375 sum -2.491 3.368 0.920 4.289 Atomic orbital electron populations 1.23402 0.75777 1.05733 1.02736 1.86110 1.24052 1.26469 1.88807 1.19323 0.90963 0.86510 1.00384 1.17435 0.86646 0.83254 1.11169 1.91453 1.76843 1.50159 1.94645 1.21117 1.01834 0.89313 1.00895 1.19596 0.93444 0.94103 1.00686 1.21607 1.00197 0.88862 0.97438 0.87148 1.23414 1.04437 0.92389 0.96008 1.21879 0.85594 0.93624 0.97571 0.89112 1.45244 1.09958 1.10798 1.68121 1.17150 0.86660 0.82009 0.76257 1.90779 1.36573 1.67892 1.51040 1.20078 0.95055 0.89087 1.14886 1.21428 0.89882 1.00392 1.01988 1.19817 0.96601 0.95806 1.09970 1.24482 0.94010 1.13007 0.83960 1.86559 1.82855 1.48442 1.18130 0.94343 0.75225 0.73427 0.89828 1.22310 0.82438 1.01353 1.04254 1.44023 1.08188 1.11950 1.44235 1.22438 0.90896 0.94096 1.00520 1.23623 1.02183 0.94400 0.97629 1.21209 0.94086 0.97885 0.96721 1.21428 1.01455 0.90805 1.05894 0.86765 0.91119 0.91046 0.82868 0.87355 0.89495 0.74758 0.82450 0.86227 0.76774 1.23724 1.20653 0.78608 0.90150 0.89434 0.86840 0.91460 0.87701 0.82441 0.82235 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.05 9.81 113.37 1.11 1.06 16 2 O -0.34 -2.27 10.36 -93.07 -0.96 -3.24 16 3 C 0.07 0.40 6.69 22.53 0.15 0.55 16 4 C 0.03 0.25 7.31 22.45 0.16 0.41 16 5 F -0.15 -1.82 17.11 44.97 0.77 -1.05 16 6 C -0.11 -0.16 9.68 22.30 0.22 0.05 16 7 C -0.08 0.19 5.29 -19.86 -0.11 0.08 16 8 C -0.06 0.38 3.87 -10.92 -0.04 0.34 16 9 H 0.11 -0.85 8.09 -2.39 -0.02 -0.87 16 10 C -0.12 0.87 7.29 31.12 0.23 1.09 16 11 C 0.12 -0.38 4.26 45.51 0.19 -0.19 16 12 H 0.09 0.03 7.57 -2.39 -0.02 0.01 16 13 N -0.69 1.39 5.24 -444.01 -2.33 -0.94 16 14 C 0.59 2.57 7.77 86.45 0.67 3.24 16 15 O -0.58 -6.19 14.32 -4.34 -0.06 -6.25 16 16 C -0.08 -0.22 6.88 40.35 0.28 0.06 16 17 C -0.11 -0.01 10.28 22.57 0.23 0.22 16 18 C -0.22 0.19 5.43 -20.12 -0.11 0.09 16 19 C -0.04 0.08 3.02 71.24 0.22 0.29 16 20 O -0.55 -1.09 12.88 -148.98 -1.92 -3.01 16 21 Si 0.77 -2.67 30.60 68.60 2.10 -0.57 16 22 C 0.03 -0.08 9.94 83.48 0.83 0.75 16 23 N -0.41 -0.37 3.16 -534.32 -1.69 -2.06 16 24 C 0.06 -0.13 10.64 127.77 1.36 1.23 16 25 C -0.14 0.64 7.27 31.21 0.23 0.86 16 26 C -0.08 0.28 8.62 22.26 0.19 0.47 16 27 C -0.18 0.17 9.04 22.36 0.20 0.37 16 28 H 0.11 -0.64 8.14 -2.39 -0.02 -0.65 16 29 H 0.07 -0.40 7.66 -2.39 -0.02 -0.42 16 30 H 0.07 -0.42 7.66 -2.39 -0.02 -0.44 16 31 H 0.15 -0.30 8.05 -2.91 -0.02 -0.32 16 32 H 0.11 -0.87 7.73 -2.39 -0.02 -0.89 16 33 H 0.09 -0.67 8.14 -2.39 -0.02 -0.69 16 34 H 0.41 -2.72 7.66 -92.71 -0.71 -3.43 16 35 H 0.16 -0.56 7.49 -2.91 -0.02 -0.58 16 36 H 0.12 -0.35 7.96 -2.39 -0.02 -0.37 16 37 H 0.38 -1.22 8.70 -74.06 -0.64 -1.86 16 38 H -0.31 -1.59 7.11 99.48 0.71 -0.89 16 39 H -0.28 0.08 7.11 99.48 0.71 0.79 16 40 H 0.20 -1.60 6.21 -2.91 -0.02 -1.62 16 41 H 0.08 -0.22 8.14 -2.38 -0.02 -0.23 16 42 H 0.09 0.19 6.22 -2.38 -0.01 0.18 16 43 H 0.11 -0.92 8.14 -2.39 -0.02 -0.94 16 44 H 0.07 -0.13 8.14 -2.39 -0.02 -0.15 16 45 H 0.10 -0.66 6.30 -2.39 -0.02 -0.67 16 46 H 0.16 -1.33 6.63 -2.92 -0.02 -1.35 16 47 H 0.16 -0.96 6.30 -2.91 -0.02 -0.97 16 Total: 0.00 -24.15 391.92 1.64 -22.51 By element: Atomic # 1 Polarization: -16.10 SS G_CDS: -0.28 Total: -16.38 kcal Atomic # 6 Polarization: 4.98 SS G_CDS: 6.01 Total: 10.99 kcal Atomic # 7 Polarization: 1.02 SS G_CDS: -4.01 Total: -3.00 kcal Atomic # 8 Polarization: -9.56 SS G_CDS: -2.95 Total: -12.50 kcal Atomic # 9 Polarization: -1.82 SS G_CDS: 0.77 Total: -1.05 kcal Atomic # 14 Polarization: -2.67 SS G_CDS: 2.10 Total: -0.57 kcal Total: -24.15 1.64 -22.51 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_9824364_10803934.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -14.578 kcal (2) G-P(sol) polarization free energy of solvation -24.152 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -38.730 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.643 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.509 kcal (6) G-S(sol) free energy of system = (1) + (5) -37.087 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.25 seconds