Wall clock time and date at job start Thu Mar 4 2021 12:35:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35958 * 117.00020 * 2 1 4 4 C 1.38905 * 120.06462 * 180.02562 * 3 2 1 5 5 F 1.35101 * 120.04679 * 0.02562 * 4 3 2 6 6 C 1.38333 * 119.90428 * 179.97438 * 4 3 2 7 7 C 1.38252 * 120.02948 * 359.97438 * 6 4 3 8 8 C 1.50704 * 119.93534 * 180.02562 * 7 6 4 9 9 H 1.09003 * 112.84890 * 348.80146 * 8 7 6 10 10 C 1.53777 * 113.61690 * 119.99850 * 8 7 6 11 11 C 1.53775 * 87.08403 * 139.98140 * 10 8 7 12 12 H 1.09004 * 113.61679 * 220.02442 * 11 10 8 13 13 N 1.46499 * 113.61771 * 89.19990 * 11 10 8 14 14 C 1.34770 * 120.00579 * 154.99870 * 13 11 10 15 15 O 1.21579 * 119.99641 * 0.02562 * 14 13 11 16 16 C 1.47689 * 120.00518 * 180.02562 * 14 13 11 17 17 C 1.39802 * 120.15766 * 179.72791 * 16 14 13 18 18 F 1.35100 * 120.08683 * 359.97438 * 17 16 14 19 19 C 1.38312 * 119.83529 * 179.72167 * 17 16 14 20 20 C 1.38190 * 120.14445 * 0.57840 * 19 17 16 21 21 C 1.50694 * 119.84800 * 179.69777 * 20 19 17 22 22 O 1.42904 * 109.47287 * 254.97686 * 21 20 19 23 23 Si 1.86300 * 109.47090 * 14.97642 * 21 20 19 24 24 C 1.38666 * 120.30978 * 359.67306 * 20 19 17 25 25 F 1.35097 * 119.91526 * 180.02562 * 24 20 19 26 26 C 1.38067 * 120.16639 * 0.04894 * 24 20 19 27 27 C 1.53775 * 113.61574 * 217.49711 * 8 7 6 28 28 C 1.38259 * 120.13001 * 0.04301 * 7 6 4 29 29 C 1.38179 * 120.09217 * 359.95460 * 28 7 6 30 30 H 1.08999 * 109.47406 * 59.99230 * 1 2 3 31 31 H 1.08994 * 109.46906 * 179.97438 * 1 2 3 32 32 H 1.09007 * 109.46698 * 299.99398 * 1 2 3 33 33 H 1.08005 * 119.98030 * 179.97438 * 6 4 3 34 34 H 1.08999 * 113.61860 * 254.53228 * 10 8 7 35 35 H 1.09007 * 113.61193 * 25.34540 * 10 8 7 36 36 H 0.97001 * 119.99774 * 335.00549 * 13 11 10 37 37 H 1.07999 * 119.93106 * 180.25141 * 19 17 16 38 38 H 1.08997 * 109.47303 * 134.97528 * 21 20 19 39 39 H 0.96694 * 113.99640 * 179.97438 * 22 21 20 40 40 H 1.48498 * 110.00192 * 178.67925 * 23 21 20 41 41 H 1.48503 * 110.00029 * 300.00468 * 23 21 20 42 42 H 1.08000 * 120.07382 * 179.97438 * 26 24 20 43 43 H 1.09004 * 113.61273 * 334.56858 * 27 8 7 44 44 H 1.09003 * 113.61779 * 105.46831 * 27 8 7 45 45 H 1.08002 * 119.95598 * 179.97438 * 28 7 6 46 46 H 1.08001 * 120.01325 * 180.29325 * 29 28 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2114 0.0000 4 6 3.4333 1.2856 -0.0005 5 9 4.1713 0.1540 -0.0016 6 6 4.0579 2.5200 -0.0011 7 6 3.3023 3.6777 -0.0016 8 6 3.9849 5.0213 -0.0028 9 1 5.0552 4.9524 0.1920 10 6 3.6355 5.8888 -1.2235 11 6 3.5893 7.0867 -0.2604 12 1 2.7760 7.7823 -0.4675 13 7 4.8818 7.7559 -0.0936 14 6 4.9273 9.0511 0.2761 15 8 3.8958 9.6641 0.4716 16 6 6.2303 9.7259 0.4437 17 6 6.2812 11.0709 0.8216 18 9 5.1379 11.7584 1.0343 19 6 7.5052 11.6947 0.9822 20 6 8.6755 10.9947 0.7585 21 6 10.0053 11.6828 0.9289 22 8 10.5649 11.9628 -0.3559 23 14 9.7645 13.2770 1.8622 24 6 8.6320 9.6618 0.3784 25 9 9.7810 8.9850 0.1622 26 6 7.4173 9.0249 0.2198 27 6 3.2677 6.0774 0.8544 28 6 1.9216 3.6053 -0.0007 29 6 1.2923 2.3751 -0.0002 30 1 -0.3634 0.5139 -0.8899 31 1 -0.3633 -1.0276 -0.0005 32 1 -0.3633 0.5138 0.8901 33 1 5.1363 2.5791 -0.0011 34 1 4.4374 5.9507 -1.9591 35 1 2.6703 5.6473 -1.6688 36 1 5.7048 7.2668 -0.2493 37 1 7.5464 12.7325 1.2780 38 1 10.6813 11.0342 1.4860 39 1 11.4232 12.4069 -0.3227 40 1 11.0728 13.9497 2.0647 41 1 8.8446 14.1702 1.1130 42 1 7.3851 7.9869 -0.0766 43 1 2.2013 5.8885 0.9781 44 1 3.7726 6.2917 1.7964 45 1 1.3341 4.5116 -0.0007 46 1 0.2137 2.3201 -0.0043 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_9824364_12360598.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 12:35:47 Heat of formation + Delta-G solvation = -140.818473 kcal Electronic energy + Delta-G solvation = -35440.850952 eV Core-core repulsion = 30042.603493 eV Total energy + Delta-G solvation = -5398.247459 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 394.122 amu Computer time = 1.43 seconds Orbital eigenvalues (eV) -50.11145 -50.09799 -49.86476 -41.80924 -41.09070 -40.29714 -39.49154 -37.96753 -37.73546 -34.82398 -33.23539 -31.83103 -31.39430 -31.14420 -28.48980 -27.86658 -26.65508 -25.85627 -24.40494 -24.08038 -23.63428 -22.59960 -21.98896 -20.35290 -19.64368 -19.36220 -18.76094 -18.55737 -18.43373 -18.07052 -17.66069 -17.39045 -17.18734 -17.15278 -16.86604 -16.52369 -16.28663 -16.19450 -16.08641 -15.87075 -15.72136 -15.60865 -15.58734 -15.44167 -15.20816 -14.89600 -14.44544 -14.08808 -13.98817 -13.74474 -13.69519 -13.65302 -13.56618 -13.38967 -13.11138 -13.02592 -12.96610 -12.39678 -12.33705 -12.19660 -11.99081 -11.81661 -11.46464 -11.26239 -11.22200 -10.63727 -10.59618 -10.17185 -9.95391 -9.81942 -9.11275 -4.97338 -0.81420 -0.30681 0.09773 0.18061 1.15046 1.37175 1.55178 1.82964 1.88453 2.18907 2.22393 2.47702 2.75458 2.84133 3.06466 3.18447 3.32367 3.42602 3.47771 3.59973 3.64119 3.72090 3.74937 3.78760 3.97036 4.05149 4.13138 4.18594 4.23817 4.31083 4.33711 4.33853 4.34102 4.52593 4.53133 4.65473 4.68647 4.69497 4.74077 4.81774 4.85550 4.89675 4.91913 5.05126 5.09177 5.16511 5.18885 5.37031 5.43734 5.62971 5.65462 6.26260 6.32405 6.48408 7.00573 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.340 6.340 3 C 0.074 3.926 4 C 0.034 3.966 5 F -0.152 7.152 6 C -0.112 4.112 7 C -0.078 4.078 8 C -0.063 4.063 9 H 0.116 0.884 10 C -0.125 4.125 11 C 0.113 3.887 12 H 0.091 0.909 13 N -0.689 5.689 14 C 0.562 3.438 15 O -0.559 6.559 16 C -0.147 4.147 17 C 0.140 3.860 18 F -0.124 7.124 19 C -0.132 4.132 20 C -0.055 4.055 21 C -0.091 4.091 22 O -0.553 6.553 23 Si 0.766 3.234 24 C 0.103 3.897 25 F -0.126 7.126 26 C -0.075 4.075 27 C -0.141 4.141 28 C -0.082 4.082 29 C -0.178 4.178 30 H 0.071 0.929 31 H 0.114 0.886 32 H 0.070 0.930 33 H 0.156 0.844 34 H 0.089 0.911 35 H 0.106 0.894 36 H 0.416 0.584 37 H 0.166 0.834 38 H 0.105 0.895 39 H 0.401 0.599 40 H -0.276 1.276 41 H -0.289 1.289 42 H 0.185 0.815 43 H 0.104 0.896 44 H 0.071 0.929 45 H 0.157 0.843 46 H 0.159 0.841 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.250 -0.128 1.620 2.050 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.255 6.255 3 C 0.028 3.972 4 C 0.015 3.985 5 F -0.131 7.131 6 C -0.130 4.130 7 C -0.078 4.078 8 C -0.081 4.081 9 H 0.134 0.866 10 C -0.163 4.163 11 C 0.008 3.992 12 H 0.110 0.890 13 N -0.342 5.342 14 C 0.349 3.651 15 O -0.438 6.438 16 C -0.151 4.151 17 C 0.119 3.881 18 F -0.102 7.102 19 C -0.150 4.150 20 C -0.056 4.056 21 C -0.199 4.199 22 O -0.364 6.364 23 Si 0.670 3.330 24 C 0.083 3.917 25 F -0.104 7.104 26 C -0.094 4.094 27 C -0.179 4.179 28 C -0.100 4.100 29 C -0.197 4.197 30 H 0.089 0.911 31 H 0.132 0.868 32 H 0.089 0.911 33 H 0.174 0.826 34 H 0.108 0.892 35 H 0.125 0.875 36 H 0.255 0.745 37 H 0.183 0.817 38 H 0.123 0.877 39 H 0.253 0.747 40 H -0.202 1.202 41 H -0.216 1.216 42 H 0.202 0.798 43 H 0.122 0.878 44 H 0.090 0.910 45 H 0.175 0.825 46 H 0.176 0.824 Dipole moment (debyes) X Y Z Total from point charges 0.164 0.608 1.541 1.665 hybrid contribution 1.142 -0.464 -0.920 1.538 sum 1.306 0.144 0.621 1.453 Atomic orbital electron populations 1.23398 0.75805 1.05707 1.02719 1.86109 1.24026 1.26522 1.88818 1.19337 0.91027 0.86472 1.00409 1.17450 0.86599 0.83315 1.11184 1.91454 1.76831 1.50190 1.94648 1.21123 1.01898 0.89205 1.00791 1.19600 0.93362 0.94198 1.00668 1.21594 1.00420 0.88738 0.97353 0.86631 1.23424 1.04528 0.92267 0.96077 1.21938 0.85708 0.93743 0.97847 0.89047 1.45420 1.10175 1.10005 1.68568 1.17980 0.87733 0.82477 0.76869 1.90873 1.35700 1.65923 1.51265 1.19813 0.94330 0.93339 1.07664 1.17748 0.82318 0.89346 0.98653 1.91601 1.48243 1.78826 1.91506 1.21044 0.89238 1.02033 1.02716 1.19499 0.95043 0.92550 0.98555 1.24983 0.93431 1.10452 0.91063 1.86535 1.41272 1.81695 1.26878 0.93959 0.79868 0.73493 0.85713 1.17331 0.82280 0.90049 1.01996 1.91561 1.47366 1.79370 1.92130 1.21352 0.88253 1.02123 0.97697 1.23590 1.02332 0.94245 0.97750 1.21215 0.94207 0.97818 0.96714 1.21425 1.01429 0.90877 1.05964 0.91079 0.86789 0.91134 0.82640 0.89239 0.87519 0.74514 0.81715 0.87699 0.74718 1.20175 1.21632 0.79806 0.87798 0.91007 0.82516 0.82376 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.06 9.81 113.37 1.11 1.06 16 2 O -0.34 -2.15 10.36 -93.07 -0.96 -3.11 16 3 C 0.07 0.36 6.69 22.53 0.15 0.51 16 4 C 0.03 0.22 7.31 22.45 0.16 0.38 16 5 F -0.15 -1.69 17.11 44.97 0.77 -0.93 16 6 C -0.11 -0.01 9.68 22.30 0.22 0.21 16 7 C -0.08 0.29 5.29 -19.85 -0.11 0.18 16 8 C -0.06 0.50 3.86 -11.02 -0.04 0.46 16 9 H 0.12 -1.24 8.09 -2.39 -0.02 -1.26 16 10 C -0.13 1.06 7.29 31.12 0.23 1.29 16 11 C 0.11 -0.52 4.32 45.52 0.20 -0.32 16 12 H 0.09 -0.02 7.46 -2.38 -0.02 -0.03 16 13 N -0.69 3.08 5.22 -443.06 -2.31 0.77 16 14 C 0.56 1.85 7.77 86.74 0.67 2.52 16 15 O -0.56 -6.94 14.94 -3.96 -0.06 -7.00 16 16 C -0.15 -0.13 5.88 -20.06 -0.12 -0.24 16 17 C 0.14 0.54 7.28 22.67 0.17 0.70 16 18 F -0.12 -1.17 15.55 44.97 0.70 -0.47 16 19 C -0.13 -0.02 8.62 22.28 0.19 0.17 16 20 C -0.06 0.05 5.30 -19.78 -0.10 -0.06 16 21 C -0.09 0.31 2.43 71.23 0.17 0.48 16 22 O -0.55 0.28 12.86 -148.98 -1.92 -1.64 16 23 Si 0.77 -3.70 30.18 68.60 2.07 -1.63 16 24 C 0.10 -0.15 7.23 22.33 0.16 0.02 16 25 F -0.13 -0.02 16.73 44.97 0.75 0.73 16 26 C -0.08 0.34 9.51 22.57 0.21 0.55 16 27 C -0.14 0.86 7.25 31.12 0.23 1.09 16 28 C -0.08 0.34 8.60 22.26 0.19 0.53 16 29 C -0.18 0.25 9.04 22.36 0.20 0.45 16 30 H 0.07 -0.43 7.66 -2.39 -0.02 -0.45 16 31 H 0.11 -0.65 8.14 -2.39 -0.02 -0.67 16 32 H 0.07 -0.41 7.67 -2.38 -0.02 -0.43 16 33 H 0.16 -0.59 8.05 -2.91 -0.02 -0.62 16 34 H 0.09 -0.88 8.14 -2.39 -0.02 -0.90 16 35 H 0.11 -0.96 7.72 -2.38 -0.02 -0.98 16 36 H 0.42 -4.57 6.74 -92.71 -0.62 -5.20 16 37 H 0.17 -0.36 4.87 -2.91 -0.01 -0.37 16 38 H 0.11 -0.74 7.89 -2.39 -0.02 -0.76 16 39 H 0.40 -3.43 8.74 -74.06 -0.65 -4.08 16 40 H -0.28 0.29 7.11 99.48 0.71 0.99 16 41 H -0.29 -0.51 6.74 99.48 0.67 0.16 16 42 H 0.18 -2.21 6.41 -2.91 -0.02 -2.23 16 43 H 0.10 -0.75 6.30 -2.38 -0.02 -0.77 16 44 H 0.07 -0.31 8.14 -2.39 -0.02 -0.33 16 45 H 0.16 -1.41 6.65 -2.91 -0.02 -1.43 16 46 H 0.16 -0.98 6.30 -2.91 -0.02 -0.99 16 Total: 0.00 -26.40 394.95 2.77 -23.63 By element: Atomic # 1 Polarization: -20.17 SS G_CDS: -0.17 Total: -20.34 kcal Atomic # 6 Polarization: 6.09 SS G_CDS: 3.90 Total: 9.99 kcal Atomic # 7 Polarization: 3.08 SS G_CDS: -2.31 Total: 0.77 kcal Atomic # 8 Polarization: -8.81 SS G_CDS: -2.94 Total: -11.75 kcal Atomic # 9 Polarization: -2.89 SS G_CDS: 2.22 Total: -0.67 kcal Atomic # 14 Polarization: -3.70 SS G_CDS: 2.07 Total: -1.63 kcal Total: -26.40 2.77 -23.63 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_9824364_12360598.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -117.188 kcal (2) G-P(sol) polarization free energy of solvation -26.395 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -143.584 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.765 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.630 kcal (6) G-S(sol) free energy of system = (1) + (5) -140.818 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.43 seconds