Wall clock time and date at job start Thu Mar 4 2021 12:36:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.35962 * 116.99921 * 2 1 4 4 C 1.38907 * 120.06143 * 179.97438 * 3 2 1 5 5 F 1.35104 * 120.04871 * 359.97438 * 4 3 2 6 6 C 1.38330 * 119.90432 * 180.25539 * 4 3 2 7 7 C 1.38264 * 120.02579 * 359.41499 * 6 4 3 8 8 C 1.50705 * 119.93291 * 180.30127 * 7 6 4 9 9 H 1.08999 * 112.84488 * 169.10465 * 8 7 6 10 10 C 1.53773 * 113.61563 * 300.30211 * 8 7 6 11 11 C 1.53788 * 87.08201 * 139.98303 * 10 8 7 12 12 H 1.08995 * 113.61784 * 220.01831 * 11 10 8 13 13 N 1.46503 * 113.61000 * 89.11450 * 11 10 8 14 14 C 1.34774 * 119.99537 * 155.00638 * 13 11 10 15 15 O 1.21581 * 120.00449 * 359.97438 * 14 13 11 16 16 C 1.47671 * 120.00093 * 179.97438 * 14 13 11 17 17 C 1.40005 * 120.45024 * 354.01833 * 16 14 13 18 18 N 1.31308 * 121.37657 * 179.69384 * 17 16 14 19 19 C 1.32826 * 121.88660 * 0.59757 * 18 17 16 20 20 N 1.37148 * 132.96441 * 179.69870 * 19 18 17 21 21 C 1.36947 * 110.11903 * 180.02562 * 20 19 18 22 22 C 1.34179 * 109.94746 * 0.02562 * 21 20 19 23 23 C 1.50697 * 126.59910 * 179.97438 * 22 21 20 24 24 O 1.42901 * 109.47306 * 254.99990 * 23 22 21 25 25 Si 1.86302 * 109.47144 * 14.99848 * 23 22 21 26 26 C 1.41022 * 120.08575 * 359.69780 * 19 18 17 27 27 C 1.39290 * 119.61773 * 0.02562 * 26 19 18 28 28 C 1.50694 * 121.03353 * 180.02562 * 27 26 19 29 29 C 1.53777 * 113.61421 * 37.80194 * 8 7 6 30 30 C 1.38255 * 120.12719 * 0.60573 * 7 6 4 31 31 C 1.38185 * 120.09455 * 359.67822 * 30 7 6 32 32 H 1.09002 * 109.46731 * 60.00803 * 1 2 3 33 33 H 1.08996 * 109.46928 * 179.97438 * 1 2 3 34 34 H 1.08991 * 109.47382 * 300.00650 * 1 2 3 35 35 H 1.08000 * 119.98495 * 179.69882 * 6 4 3 36 36 H 1.09001 * 113.61579 * 254.53059 * 10 8 7 37 37 H 1.08997 * 113.61969 * 25.43258 * 10 8 7 38 38 H 0.96997 * 120.00494 * 334.99775 * 13 11 10 39 39 H 1.07999 * 119.31168 * 0.02562 * 17 16 14 40 40 H 0.97006 * 124.94400 * 359.96868 * 20 19 18 41 41 H 1.08000 * 125.02681 * 179.97438 * 21 20 19 42 42 H 1.08997 * 109.47591 * 134.99737 * 23 22 21 43 43 H 0.96706 * 113.99921 * 180.02562 * 24 23 22 44 44 H 1.48496 * 110.00179 * 178.67851 * 25 23 22 45 45 H 1.48500 * 110.00157 * 300.00281 * 25 23 22 46 46 H 1.09005 * 109.47421 * 263.69432 * 28 27 26 47 47 H 1.08996 * 109.47114 * 23.69112 * 28 27 26 48 48 H 1.09001 * 109.47385 * 143.68817 * 28 27 26 49 49 H 1.08999 * 113.61548 * 334.56541 * 29 8 7 50 50 H 1.09009 * 113.61424 * 105.46836 * 29 8 7 51 51 H 1.07998 * 119.95467 * 179.69770 * 30 7 6 52 52 H 1.08004 * 120.01504 * 180.02562 * 31 30 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0462 1.2114 0.0000 4 6 3.4333 1.2856 0.0005 5 9 4.1713 0.1540 0.0016 6 6 4.0579 2.5199 0.0059 7 6 3.3023 3.6777 -0.0015 8 6 3.9850 5.0213 -0.0026 9 1 3.2982 5.8448 -0.1984 10 6 4.8919 5.2524 1.2176 11 6 5.8865 5.9199 0.2532 12 1 6.9279 5.6737 0.4604 13 7 5.6635 7.3578 0.0828 14 6 6.6822 8.1583 -0.2885 15 8 7.7863 7.6873 -0.4817 16 6 6.4574 9.6076 -0.4608 17 6 5.1671 10.1420 -0.3633 18 7 4.9472 11.4285 -0.5075 19 6 5.9305 12.2840 -0.7634 20 7 5.9616 13.6413 -0.9581 21 6 7.2459 14.0540 -1.1942 22 6 8.0779 13.0018 -1.1626 23 6 9.5697 13.0293 -1.3742 24 8 9.8765 12.5138 -2.6712 25 14 10.1834 14.7834 -1.2421 26 6 7.2573 11.8212 -0.8819 27 6 7.5290 10.4635 -0.7296 28 6 8.9349 9.9344 -0.8491 29 6 5.2607 5.0633 -0.8601 30 6 1.9216 3.6053 -0.0017 31 6 1.2923 2.3751 -0.0011 32 1 -0.3633 0.5137 -0.8901 33 1 -0.3633 -1.0276 -0.0005 34 1 -0.3633 0.5139 0.8898 35 1 5.1363 2.5791 0.0112 36 1 4.4692 5.9377 1.9523 37 1 5.2672 4.3313 1.6634 38 1 4.7828 7.7337 0.2372 39 1 4.3359 9.4831 -0.1602 40 1 5.1865 14.2241 -0.9332 41 1 7.5447 15.0752 -1.3793 42 1 10.0558 12.4163 -0.6153 43 1 10.8216 12.5014 -2.8760 44 1 11.6575 14.8203 -1.4172 45 1 9.5282 15.6296 -2.2716 46 1 9.0982 9.5621 -1.8605 47 1 9.6436 10.7350 -0.6378 48 1 9.0797 9.1232 -0.1356 49 1 5.7369 4.0905 -0.9824 50 1 5.1358 5.5961 -1.8029 51 1 1.3341 4.5115 -0.0025 52 1 0.2136 2.3200 -0.0016 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_9824364_12890568.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 12:36:16 Heat of formation + Delta-G solvation = -10.201472 kcal Electronic energy + Delta-G solvation = -37981.936965 eV Core-core repulsion = 32829.882095 eV Total energy + Delta-G solvation = -5152.054870 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 412.163 amu Computer time = 1.64 seconds Orbital eigenvalues (eV) -49.87009 -42.84455 -41.65085 -40.92395 -39.93464 -38.68936 -37.96187 -37.76073 -35.20015 -34.50617 -32.05807 -31.74642 -31.56854 -30.61294 -28.94365 -28.45148 -26.65279 -26.54596 -25.81404 -24.65498 -24.03004 -23.77058 -22.58911 -22.00206 -20.40026 -20.26240 -19.41773 -19.22141 -18.72305 -18.49007 -17.98149 -17.76808 -17.54660 -17.18559 -17.11988 -16.67448 -16.47008 -16.16578 -16.08831 -15.85409 -15.65406 -15.61070 -15.40925 -15.18401 -15.08057 -14.73367 -14.67855 -14.26976 -14.09945 -13.97726 -13.87911 -13.72205 -13.61293 -13.51068 -13.40382 -13.26381 -13.08909 -12.99482 -12.85029 -12.63724 -12.19903 -12.13442 -11.98402 -11.96667 -11.43475 -11.22174 -11.19140 -11.13743 -10.46650 -10.22794 -10.10322 -9.93941 -9.60656 -9.12203 -9.10636 -4.85453 -0.33810 -0.06406 0.10774 0.18271 1.33325 1.39704 1.62543 1.71211 1.80261 2.00511 2.04460 2.19073 2.48691 2.76123 3.18998 3.31776 3.38801 3.49591 3.60705 3.66715 3.68453 3.71897 3.74708 3.78346 3.79352 3.95405 4.02504 4.13080 4.18794 4.22260 4.28759 4.32445 4.33018 4.34435 4.34910 4.52949 4.61058 4.67991 4.69435 4.72010 4.79913 4.82534 4.88086 4.91239 4.93648 5.01395 5.07470 5.10536 5.13696 5.18232 5.24180 5.25410 5.40458 5.50564 5.64969 5.68805 5.73723 6.22396 6.26994 6.50142 6.66262 6.83682 7.19437 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.341 6.341 3 C 0.073 3.927 4 C 0.034 3.966 5 F -0.153 7.153 6 C -0.115 4.115 7 C -0.079 4.079 8 C -0.059 4.059 9 H 0.126 0.874 10 C -0.126 4.126 11 C 0.117 3.883 12 H 0.087 0.913 13 N -0.694 5.694 14 C 0.574 3.426 15 O -0.565 6.565 16 C -0.241 4.241 17 C 0.182 3.818 18 N -0.514 5.514 19 C 0.289 3.711 20 N -0.559 5.559 21 C 0.087 3.913 22 C -0.161 4.161 23 C -0.061 4.061 24 O -0.558 6.558 25 Si 0.775 3.225 26 C -0.167 4.167 27 C 0.062 3.938 28 C -0.113 4.113 29 C -0.147 4.147 30 C -0.077 4.077 31 C -0.179 4.179 32 H 0.070 0.930 33 H 0.113 0.887 34 H 0.072 0.928 35 H 0.149 0.851 36 H 0.094 0.906 37 H 0.097 0.903 38 H 0.415 0.585 39 H 0.198 0.802 40 H 0.439 0.561 41 H 0.216 0.784 42 H 0.082 0.918 43 H 0.391 0.609 44 H -0.291 1.291 45 H -0.278 1.278 46 H 0.070 0.930 47 H 0.076 0.924 48 H 0.085 0.915 49 H 0.091 0.909 50 H 0.070 0.930 51 H 0.164 0.836 52 H 0.161 0.839 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.391 7.327 3.598 9.782 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.256 6.256 3 C 0.027 3.973 4 C 0.014 3.986 5 F -0.132 7.132 6 C -0.133 4.133 7 C -0.079 4.079 8 C -0.077 4.077 9 H 0.144 0.856 10 C -0.164 4.164 11 C 0.012 3.988 12 H 0.105 0.895 13 N -0.346 5.346 14 C 0.362 3.638 15 O -0.445 6.445 16 C -0.248 4.248 17 C 0.013 3.987 18 N -0.228 5.228 19 C 0.055 3.945 20 N -0.166 5.166 21 C -0.040 4.040 22 C -0.168 4.168 23 C -0.169 4.169 24 O -0.368 6.368 25 Si 0.678 3.322 26 C -0.174 4.174 27 C 0.054 3.946 28 C -0.168 4.168 29 C -0.186 4.186 30 C -0.095 4.095 31 C -0.198 4.198 32 H 0.089 0.911 33 H 0.132 0.868 34 H 0.090 0.910 35 H 0.167 0.833 36 H 0.113 0.887 37 H 0.116 0.884 38 H 0.253 0.747 39 H 0.215 0.785 40 H 0.280 0.720 41 H 0.232 0.768 42 H 0.099 0.901 43 H 0.241 0.759 44 H -0.217 1.217 45 H -0.204 1.204 46 H 0.088 0.912 47 H 0.095 0.905 48 H 0.104 0.896 49 H 0.110 0.890 50 H 0.089 0.911 51 H 0.182 0.818 52 H 0.178 0.822 Dipole moment (debyes) X Y Z Total from point charges -5.676 7.855 3.108 10.178 hybrid contribution 0.800 -1.367 -1.078 1.916 sum -4.876 6.488 2.030 8.366 Atomic orbital electron populations 1.23399 0.75766 1.05697 1.02764 1.86109 1.24074 1.26544 1.88832 1.19332 0.90920 0.86560 1.00438 1.17424 0.86678 0.83195 1.11292 1.91452 1.76893 1.50203 1.94669 1.21019 1.01693 0.89471 1.01140 1.19626 0.93439 0.94212 1.00649 1.21606 0.95335 0.93806 0.96909 0.85583 1.23400 0.95153 1.01589 0.96254 1.21838 1.00325 0.79307 0.97358 0.89472 1.45393 1.12718 1.07176 1.69302 1.17961 0.84210 0.85641 0.75941 1.90744 1.24943 1.76573 1.52285 1.20493 0.95601 0.93979 1.14762 1.23015 0.95137 0.89478 0.91038 1.66528 1.34134 1.03584 1.18529 1.18760 0.90180 0.86526 0.99010 1.41558 1.10127 1.04337 1.60598 1.22219 0.81315 1.00482 0.99955 1.19722 0.94557 0.91102 1.11405 1.24536 0.93445 1.12064 0.86814 1.86601 1.30979 1.85574 1.33618 0.94185 0.77185 0.72991 0.87825 1.19741 0.94538 0.93773 1.09369 1.20077 0.96591 0.90632 0.87346 1.21013 0.91038 1.01659 1.03133 1.23588 0.96243 1.00667 0.98070 1.21323 0.93877 0.98085 0.96230 1.21463 1.01476 0.90898 1.05934 0.91109 0.86838 0.90982 0.83321 0.88698 0.88446 0.74700 0.78543 0.71977 0.76768 0.90055 0.75882 1.21749 1.20424 0.91172 0.90497 0.89627 0.89020 0.91120 0.81845 0.82202 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.05 9.81 113.37 1.11 1.06 16 2 O -0.34 -2.37 10.36 -93.12 -0.96 -3.33 16 3 C 0.07 0.41 6.69 22.53 0.15 0.56 16 4 C 0.03 0.26 7.31 22.45 0.16 0.42 16 5 F -0.15 -1.94 17.11 44.97 0.77 -1.17 16 6 C -0.11 -0.22 8.56 22.30 0.19 -0.03 16 7 C -0.08 0.21 5.29 -19.85 -0.11 0.11 16 8 C -0.06 0.40 3.85 -11.02 -0.04 0.35 16 9 H 0.13 -1.42 8.09 -2.39 -0.02 -1.44 16 10 C -0.13 0.83 7.29 31.12 0.23 1.05 16 11 C 0.12 -0.27 4.32 45.52 0.20 -0.08 16 12 H 0.09 0.21 7.46 -2.39 -0.02 0.19 16 13 N -0.69 1.88 5.21 -443.05 -2.31 -0.43 16 14 C 0.57 2.88 7.72 86.74 0.67 3.55 16 15 O -0.57 -6.92 13.09 -3.97 -0.05 -6.98 16 16 C -0.24 -1.16 5.89 -19.99 -0.12 -1.28 16 17 C 0.18 0.16 10.67 85.20 0.91 1.07 16 18 N -0.51 -2.31 10.37 -191.75 -1.99 -4.30 16 19 C 0.29 1.42 8.42 134.02 1.13 2.55 16 20 N -0.56 0.92 6.04 -192.25 -1.16 -0.25 16 21 C 0.09 -0.25 10.44 82.97 0.87 0.62 16 22 C -0.16 -0.37 5.61 -18.64 -0.10 -0.47 16 23 C -0.06 0.03 2.06 71.23 0.15 0.18 16 24 O -0.56 -1.58 12.86 -148.98 -1.92 -3.49 16 25 Si 0.78 -3.79 30.80 68.60 2.11 -1.68 16 26 C -0.17 -1.10 6.16 -20.19 -0.12 -1.23 16 27 C 0.06 0.48 5.98 -19.25 -0.12 0.37 16 28 C -0.11 -0.85 8.69 71.23 0.62 -0.23 16 29 C -0.15 0.44 7.25 31.12 0.23 0.67 16 30 C -0.08 0.32 9.70 22.26 0.22 0.54 16 31 C -0.18 0.22 9.04 22.36 0.20 0.42 16 32 H 0.07 -0.41 7.66 -2.39 -0.02 -0.42 16 33 H 0.11 -0.62 8.14 -2.39 -0.02 -0.63 16 34 H 0.07 -0.43 7.66 -2.39 -0.02 -0.45 16 35 H 0.15 -0.06 6.67 -2.91 -0.02 -0.07 16 36 H 0.09 -0.86 8.14 -2.39 -0.02 -0.88 16 37 H 0.10 -0.54 7.71 -2.39 -0.02 -0.56 16 38 H 0.41 -3.86 6.78 -92.71 -0.63 -4.49 16 39 H 0.20 -1.62 6.43 -2.91 -0.02 -1.64 16 40 H 0.44 -3.29 8.96 -92.70 -0.83 -4.13 16 41 H 0.22 -2.17 6.31 -2.91 -0.02 -2.19 16 42 H 0.08 -0.17 6.05 -2.39 -0.01 -0.19 16 43 H 0.39 -1.90 8.74 -74.05 -0.65 -2.55 16 44 H -0.29 -0.14 7.11 99.48 0.71 0.56 16 45 H -0.28 0.19 7.04 99.48 0.70 0.89 16 46 H 0.07 0.70 8.14 -2.38 -0.02 0.68 16 47 H 0.08 0.34 5.06 -2.39 -0.01 0.32 16 48 H 0.09 0.84 5.94 -2.39 -0.01 0.82 16 49 H 0.09 -0.19 6.32 -2.39 -0.02 -0.21 16 50 H 0.07 -0.09 8.14 -2.38 -0.02 -0.11 16 51 H 0.16 -1.71 8.05 -2.91 -0.02 -1.74 16 52 H 0.16 -1.02 6.30 -2.91 -0.02 -1.03 16 Total: 0.00 -30.54 423.52 -0.12 -30.66 By element: Atomic # 1 Polarization: -18.22 SS G_CDS: -1.02 Total: -19.24 kcal Atomic # 6 Polarization: 3.79 SS G_CDS: 6.42 Total: 10.21 kcal Atomic # 7 Polarization: 0.49 SS G_CDS: -5.46 Total: -4.97 kcal Atomic # 8 Polarization: -10.87 SS G_CDS: -2.93 Total: -13.80 kcal Atomic # 9 Polarization: -1.94 SS G_CDS: 0.77 Total: -1.17 kcal Atomic # 14 Polarization: -3.79 SS G_CDS: 2.11 Total: -1.68 kcal Total: -30.54 -0.12 -30.66 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_9824364_12890568.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 20.459 kcal (2) G-P(sol) polarization free energy of solvation -30.544 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -10.085 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.116 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.660 kcal (6) G-S(sol) free energy of system = (1) + (5) -10.201 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.64 seconds