Wall clock time and date at job start Thu Mar 4 2021 12:37:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35953 * 117.00180 * 2 1 4 4 C 1.38910 * 120.06203 * 179.97438 * 3 2 1 5 5 F 1.35105 * 120.04828 * 0.02562 * 4 3 2 6 6 C 1.38326 * 119.90623 * 179.97438 * 4 3 2 7 7 C 1.38263 * 120.02912 * 359.97438 * 6 4 3 8 8 C 1.50701 * 119.93690 * 179.97438 * 7 6 4 9 9 H 1.09002 * 112.85178 * 9.66397 * 8 7 6 10 10 C 1.53785 * 113.69000 * 140.93555 * 8 7 6 11 11 C 1.53779 * 87.08093 * 139.98979 * 10 8 7 12 12 H 1.08994 * 113.61314 * 220.01752 * 11 10 8 13 13 N 1.46502 * 113.69134 * 89.12362 * 11 10 8 14 14 C 1.34780 * 119.99583 * 107.46310 * 13 11 10 15 15 O 1.21613 * 120.00146 * 0.02562 * 14 13 11 16 16 C 1.47382 * 119.99665 * 180.02562 * 14 13 11 17 17 C 1.36414 * 127.19219 * 180.02562 * 16 14 13 18 18 C 1.50702 * 125.79920 * 359.97438 * 17 16 14 19 19 O 1.33644 * 108.40013 * 180.02562 * 17 16 14 20 20 C 1.34212 * 110.90746 * 359.97438 * 19 17 16 21 21 C 1.50705 * 125.43884 * 180.02562 * 20 19 17 22 22 O 1.42893 * 109.47178 * 244.97446 * 21 20 19 23 23 Si 1.86298 * 109.46969 * 4.97537 * 21 20 19 24 24 C 1.34180 * 109.12517 * 359.70873 * 20 19 17 25 25 C 1.53781 * 113.61206 * 238.47091 * 8 7 6 26 26 C 1.38262 * 120.12604 * 0.27193 * 7 6 4 27 27 C 1.38186 * 120.08914 * 359.49584 * 26 7 6 28 28 H 1.09002 * 109.46738 * 59.99889 * 1 2 3 29 29 H 1.08997 * 109.47136 * 179.97438 * 1 2 3 30 30 H 1.09002 * 109.46981 * 300.00378 * 1 2 3 31 31 H 1.07997 * 119.98996 * 179.97438 * 6 4 3 32 32 H 1.09003 * 113.60734 * 254.54099 * 10 8 7 33 33 H 1.08996 * 113.61146 * 25.43597 * 10 8 7 34 34 H 0.96999 * 120.00301 * 287.47041 * 13 11 10 35 35 H 1.09008 * 109.46837 * 90.00391 * 18 17 16 36 36 H 1.09001 * 109.47079 * 210.00028 * 18 17 16 37 37 H 1.08994 * 109.47358 * 330.00602 * 18 17 16 38 38 H 1.09003 * 109.47088 * 124.97327 * 21 20 19 39 39 H 0.96698 * 114.00387 * 180.02562 * 22 21 20 40 40 H 1.48504 * 109.99958 * 178.68254 * 23 21 20 41 41 H 1.48502 * 109.99915 * 299.99995 * 23 21 20 42 42 H 1.08001 * 127.02782 * 180.27563 * 24 20 19 43 43 H 1.09005 * 113.61302 * 334.48043 * 25 8 7 44 44 H 1.08996 * 113.61527 * 105.30207 * 25 8 7 45 45 H 1.07992 * 119.95241 * 179.72701 * 26 7 6 46 46 H 1.08005 * 120.00815 * 180.23255 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2113 0.0000 4 6 3.4334 1.2855 0.0005 5 9 4.1714 0.1538 0.0005 6 6 4.0581 2.5197 0.0000 7 6 3.3025 3.6776 -0.0016 8 6 3.9852 5.0211 -0.0016 9 1 5.0600 4.9498 -0.1689 10 6 3.2914 6.0667 -0.8905 11 6 3.5859 7.0901 0.2189 12 1 2.7687 7.7892 0.3961 13 7 4.8832 7.7557 0.0766 14 6 4.9399 9.0460 -0.3088 15 8 3.9142 9.6578 -0.5379 16 6 6.2450 9.7154 -0.4525 17 6 6.4725 11.0064 -0.8300 18 6 5.4154 12.0213 -1.1815 19 8 7.7921 11.2178 -0.8362 20 6 8.4565 10.1093 -0.4742 21 6 9.9547 9.9830 -0.3706 22 8 10.4225 9.0486 -1.3452 23 14 10.7404 11.6444 -0.6759 24 6 7.5736 9.1333 -0.2125 25 6 3.6059 5.9047 1.1985 26 6 1.9218 3.6053 0.0030 27 6 1.2925 2.3750 -0.0013 28 1 -0.3633 0.5139 -0.8900 29 1 -0.3633 -1.0276 -0.0005 30 1 -0.3633 0.5139 0.8900 31 1 5.1364 2.5789 0.0008 32 1 3.8206 6.2680 -1.8220 33 1 2.2284 5.8773 -1.0390 34 1 5.7013 7.2677 0.2595 35 1 5.1171 12.5613 -0.2828 36 1 5.8155 12.7245 -1.9119 37 1 4.5491 11.5123 -1.6039 38 1 10.2217 9.6325 0.6264 39 1 11.3804 8.9168 -1.3358 40 1 12.2160 11.5401 -0.5452 41 1 10.3839 12.1333 -2.0321 42 1 7.7940 8.1252 0.1061 43 1 2.6287 5.6711 1.6211 44 1 4.3884 5.9742 1.9541 45 1 1.3344 4.5115 0.0062 46 1 0.2138 2.3201 -0.0015 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_9824364_13308374.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 12:37:09 Heat of formation + Delta-G solvation = -72.614355 kcal Electronic energy + Delta-G solvation = -31303.296189 eV Core-core repulsion = 26656.458182 eV Total energy + Delta-G solvation = -4646.838007 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.141 amu Computer time = 1.23 seconds Orbital eigenvalues (eV) -49.88285 -43.76517 -41.61918 -40.78357 -39.62281 -38.08193 -37.91613 -34.69898 -33.89956 -33.15991 -31.85075 -31.19389 -29.46771 -28.39750 -26.66037 -26.38470 -25.47000 -24.29710 -23.77457 -22.74665 -22.14265 -20.81751 -20.07546 -19.41356 -18.86046 -18.51048 -18.03277 -17.62529 -17.33815 -17.19850 -17.10374 -16.88430 -16.28371 -16.09971 -16.03256 -15.83272 -15.78059 -15.57871 -15.28450 -15.09057 -14.72404 -14.21910 -14.10380 -14.07898 -13.98457 -13.84038 -13.69508 -13.58210 -13.38151 -13.13049 -13.07296 -12.97477 -12.65173 -12.35592 -12.19843 -12.16184 -11.82229 -11.47088 -11.26817 -11.12609 -10.93536 -10.61489 -10.10143 -9.97172 -9.56788 -9.12659 -4.95130 0.07919 0.16147 0.22844 0.81308 1.16452 1.37000 1.68571 1.94141 2.12158 2.17605 2.24383 2.46060 3.16671 3.22168 3.47349 3.53133 3.58429 3.68762 3.74075 3.77227 3.78016 3.97140 4.04213 4.13346 4.16435 4.22006 4.29056 4.32803 4.33576 4.46510 4.50762 4.61168 4.62653 4.66978 4.69289 4.78552 4.80545 4.86163 4.89978 4.92533 5.03985 5.07252 5.13695 5.16932 5.19791 5.23236 5.46941 5.63094 5.65220 5.91891 6.25132 6.49069 6.52072 7.16894 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.340 6.340 3 C 0.075 3.925 4 C 0.035 3.965 5 F -0.152 7.152 6 C -0.114 4.114 7 C -0.078 4.078 8 C -0.063 4.063 9 H 0.108 0.892 10 C -0.142 4.142 11 C 0.116 3.884 12 H 0.094 0.906 13 N -0.695 5.695 14 C 0.593 3.407 15 O -0.571 6.571 16 C -0.268 4.268 17 C 0.084 3.916 18 C -0.084 4.084 19 O -0.177 6.177 20 C -0.024 4.024 21 C -0.037 4.037 22 O -0.554 6.554 23 Si 0.761 3.239 24 C -0.145 4.145 25 C -0.123 4.123 26 C -0.081 4.081 27 C -0.177 4.177 28 H 0.070 0.930 29 H 0.114 0.886 30 H 0.071 0.929 31 H 0.153 0.847 32 H 0.064 0.936 33 H 0.105 0.895 34 H 0.413 0.587 35 H 0.105 0.895 36 H 0.094 0.906 37 H 0.098 0.902 38 H 0.133 0.867 39 H 0.406 0.594 40 H -0.263 1.263 41 H -0.313 1.313 42 H 0.181 0.819 43 H 0.109 0.891 44 H 0.087 0.913 45 H 0.158 0.842 46 H 0.161 0.839 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.239 2.140 4.249 4.763 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.254 6.254 3 C 0.028 3.972 4 C 0.015 3.985 5 F -0.131 7.131 6 C -0.132 4.132 7 C -0.078 4.078 8 C -0.082 4.082 9 H 0.126 0.874 10 C -0.180 4.180 11 C 0.011 3.989 12 H 0.112 0.888 13 N -0.346 5.346 14 C 0.382 3.618 15 O -0.452 6.452 16 C -0.273 4.273 17 C 0.031 3.969 18 C -0.140 4.140 19 O -0.074 6.074 20 C -0.072 4.072 21 C -0.146 4.146 22 O -0.366 6.366 23 Si 0.666 3.334 24 C -0.164 4.164 25 C -0.161 4.161 26 C -0.099 4.099 27 C -0.196 4.196 28 H 0.088 0.912 29 H 0.133 0.867 30 H 0.090 0.910 31 H 0.171 0.829 32 H 0.082 0.918 33 H 0.123 0.877 34 H 0.249 0.751 35 H 0.123 0.877 36 H 0.112 0.888 37 H 0.116 0.884 38 H 0.150 0.850 39 H 0.258 0.742 40 H -0.188 1.188 41 H -0.241 1.241 42 H 0.198 0.802 43 H 0.127 0.873 44 H 0.105 0.895 45 H 0.176 0.824 46 H 0.178 0.822 Dipole moment (debyes) X Y Z Total from point charges -0.290 2.992 3.412 4.547 hybrid contribution 0.956 -1.754 -0.647 2.100 sum 0.667 1.238 2.765 3.102 Atomic orbital electron populations 1.23406 0.75758 1.05742 1.02750 1.86108 1.24067 1.26453 1.88801 1.19316 0.90948 0.86521 1.00368 1.17430 0.86658 0.83229 1.11190 1.91453 1.76852 1.50143 1.94650 1.21106 1.01791 0.89339 1.00976 1.19599 0.93475 0.94073 1.00691 1.21553 1.00109 0.88914 0.97575 0.87362 1.23590 1.02324 0.94610 0.97507 1.21891 0.85888 0.93716 0.97450 0.88814 1.45362 1.09761 1.10872 1.68577 1.17285 0.86967 0.81801 0.75702 1.90753 1.36195 1.65958 1.52335 1.21211 0.94141 0.95642 1.16281 1.23262 0.81819 0.95851 0.96013 1.20719 0.93144 0.95973 1.04176 1.83656 1.18099 1.37540 1.68124 1.21484 0.94502 0.85295 1.05885 1.23967 0.88700 1.05222 0.96678 1.86514 1.29991 1.61838 1.58277 0.93698 0.78190 0.77716 0.83819 1.22795 0.89059 1.00852 1.03683 1.23413 1.04373 0.92356 0.95981 1.21207 0.94055 0.97915 0.96680 1.21430 1.01478 0.90788 1.05855 0.91150 0.86749 0.90997 0.82940 0.91754 0.87674 0.75055 0.87705 0.88773 0.88398 0.84973 0.74166 1.18836 1.24128 0.80216 0.87302 0.89469 0.82416 0.82191 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.05 9.81 113.37 1.11 1.06 16 2 O -0.34 -2.30 10.36 -93.02 -0.96 -3.26 16 3 C 0.07 0.42 6.69 22.53 0.15 0.57 16 4 C 0.03 0.26 7.31 22.45 0.16 0.42 16 5 F -0.15 -1.83 17.11 44.97 0.77 -1.06 16 6 C -0.11 -0.19 9.68 22.30 0.22 0.02 16 7 C -0.08 0.16 5.29 -19.85 -0.11 0.05 16 8 C -0.06 0.35 3.86 -11.01 -0.04 0.31 16 9 H 0.11 -0.76 8.08 -2.39 -0.02 -0.78 16 10 C -0.14 0.52 7.26 31.12 0.23 0.75 16 11 C 0.12 -0.30 4.32 45.52 0.20 -0.10 16 12 H 0.09 0.08 7.46 -2.39 -0.02 0.06 16 13 N -0.70 0.76 5.26 -443.33 -2.33 -1.57 16 14 C 0.59 3.29 7.81 86.65 0.68 3.97 16 15 O -0.57 -6.59 14.44 -4.07 -0.06 -6.65 16 16 C -0.27 -1.23 6.31 -18.99 -0.12 -1.35 16 17 C 0.08 0.41 7.37 25.26 0.19 0.59 16 18 C -0.08 -0.09 9.89 71.24 0.70 0.61 16 19 O -0.18 -0.82 8.90 4.57 0.04 -0.78 16 20 C -0.02 -0.05 6.22 24.76 0.15 0.10 16 21 C -0.04 0.12 2.96 71.24 0.21 0.33 16 22 O -0.55 0.69 12.85 -148.98 -1.92 -1.22 16 23 Si 0.76 -1.79 32.09 68.60 2.20 0.41 16 24 C -0.14 -0.13 10.48 23.65 0.25 0.12 16 25 C -0.12 0.83 7.29 31.12 0.23 1.06 16 26 C -0.08 0.26 8.52 22.26 0.19 0.45 16 27 C -0.18 0.14 9.04 22.36 0.20 0.34 16 28 H 0.07 -0.39 7.66 -2.39 -0.02 -0.41 16 29 H 0.11 -0.63 8.14 -2.39 -0.02 -0.65 16 30 H 0.07 -0.42 7.66 -2.39 -0.02 -0.44 16 31 H 0.15 -0.26 8.05 -2.91 -0.02 -0.28 16 32 H 0.06 -0.04 8.14 -2.39 -0.02 -0.06 16 33 H 0.10 -0.58 6.41 -2.39 -0.02 -0.59 16 34 H 0.41 -2.41 7.87 -92.71 -0.73 -3.14 16 35 H 0.10 -0.16 8.14 -2.38 -0.02 -0.18 16 36 H 0.09 -0.19 8.14 -2.39 -0.02 -0.21 16 37 H 0.10 0.40 6.48 -2.39 -0.02 0.39 16 38 H 0.13 -1.33 7.96 -2.39 -0.02 -1.35 16 39 H 0.41 -4.11 8.74 -74.06 -0.65 -4.75 16 40 H -0.26 0.17 7.11 99.48 0.71 0.88 16 41 H -0.31 -2.53 7.11 99.48 0.71 -1.82 16 42 H 0.18 -0.89 7.74 -2.91 -0.02 -0.91 16 43 H 0.11 -0.87 7.61 -2.38 -0.02 -0.89 16 44 H 0.09 -0.67 8.14 -2.39 -0.02 -0.69 16 45 H 0.16 -1.30 6.72 -2.91 -0.02 -1.32 16 46 H 0.16 -0.94 6.30 -2.91 -0.02 -0.96 16 Total: 0.00 -24.99 390.83 2.05 -22.94 By element: Atomic # 1 Polarization: -17.82 SS G_CDS: -0.29 Total: -18.10 kcal Atomic # 6 Polarization: 4.71 SS G_CDS: 4.60 Total: 9.30 kcal Atomic # 7 Polarization: 0.76 SS G_CDS: -2.33 Total: -1.57 kcal Atomic # 8 Polarization: -9.02 SS G_CDS: -2.90 Total: -11.92 kcal Atomic # 9 Polarization: -1.83 SS G_CDS: 0.77 Total: -1.06 kcal Atomic # 14 Polarization: -1.79 SS G_CDS: 2.20 Total: 0.41 kcal Total: -24.99 2.05 -22.94 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_9824364_13308374.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -49.674 kcal (2) G-P(sol) polarization free energy of solvation -24.993 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -74.666 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.052 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.941 kcal (6) G-S(sol) free energy of system = (1) + (5) -72.614 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.23 seconds