Wall clock time and date at job start Thu Mar 4 2021 12:37:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.35958 * 116.99511 * 2 1 4 4 C 1.38912 * 120.05987 * 180.02562 * 3 2 1 5 5 F 1.35097 * 120.04767 * 359.97438 * 4 3 2 6 6 C 1.38335 * 119.90106 * 179.97438 * 4 3 2 7 7 C 1.38251 * 120.03237 * 359.97438 * 6 4 3 8 8 C 1.50702 * 119.93611 * 180.02562 * 7 6 4 9 9 H 1.09003 * 112.84955 * 191.17268 * 8 7 6 10 10 C 1.53775 * 113.61467 * 322.48038 * 8 7 6 11 11 C 1.53784 * 87.08366 * 139.98112 * 10 8 7 12 12 H 1.09000 * 113.69271 * 220.00948 * 11 10 8 13 13 N 1.46500 * 113.61303 * 89.11497 * 11 10 8 14 14 C 1.34779 * 119.99887 * 107.50623 * 13 11 10 15 15 O 1.21274 * 120.00004 * 359.97438 * 14 13 11 16 16 C 1.50698 * 119.99703 * 179.97438 * 14 13 11 17 17 C 1.50703 * 109.46859 * 180.02562 * 16 14 13 18 18 C 1.34856 * 125.88498 * 274.69156 * 17 16 14 19 19 C 1.40901 * 107.41116 * 179.88691 * 18 17 16 20 20 C 1.34847 * 107.41611 * 0.37854 * 19 18 17 21 21 C 1.50702 * 125.88848 * 179.73655 * 20 19 18 22 22 O 1.42905 * 109.47130 * 245.03872 * 21 20 19 23 23 Si 1.86298 * 109.47214 * 5.03849 * 21 20 19 24 24 N 1.36336 * 125.89227 * 94.99949 * 17 16 14 25 25 C 1.53778 * 113.61546 * 59.97992 * 8 7 6 26 26 C 1.38264 * 120.12779 * 0.02562 * 7 6 4 27 27 C 1.38185 * 120.09170 * 359.97438 * 26 7 6 28 28 H 1.09004 * 109.47321 * 60.00526 * 1 2 3 29 29 H 1.09001 * 109.46894 * 180.02562 * 1 2 3 30 30 H 1.09001 * 109.47694 * 299.99974 * 1 2 3 31 31 H 1.08003 * 119.98126 * 179.97438 * 6 4 3 32 32 H 1.08996 * 113.61784 * 254.53123 * 10 8 7 33 33 H 1.09004 * 113.61337 * 25.43313 * 10 8 7 34 34 H 0.97005 * 120.00013 * 287.50314 * 13 11 10 35 35 H 1.08999 * 109.47355 * 300.00412 * 16 14 13 36 36 H 1.09002 * 109.47084 * 60.00379 * 16 14 13 37 37 H 1.07999 * 126.29648 * 0.02562 * 18 17 16 38 38 H 1.07995 * 126.28560 * 180.17022 * 19 18 17 39 39 H 1.08998 * 109.47075 * 125.04207 * 21 20 19 40 40 H 0.96704 * 113.99488 * 60.00172 * 22 21 20 41 41 H 1.48503 * 109.99964 * 179.97438 * 23 21 20 42 42 H 1.48499 * 109.99911 * 301.32126 * 23 21 20 43 43 H 0.96995 * 125.63829 * 359.96167 * 24 17 16 44 44 H 1.09007 * 113.61486 * 334.56919 * 25 8 7 45 45 H 1.09004 * 113.61683 * 105.46915 * 25 8 7 46 46 H 1.07991 * 119.95333 * 180.27527 * 26 7 6 47 47 H 1.07998 * 120.01184 * 179.97438 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0461 1.2114 0.0000 4 6 3.4332 1.2857 -0.0005 5 9 4.1713 0.1541 -0.0005 6 6 4.0577 2.5201 -0.0011 7 6 3.3021 3.6778 -0.0016 8 6 3.9847 5.0214 -0.0028 9 1 3.2979 5.8452 0.1915 10 6 5.2603 5.0650 0.8549 11 6 5.8863 5.9197 -0.2599 12 1 6.9278 5.6742 -0.4675 13 7 5.6633 7.3578 -0.0920 14 6 6.6820 8.1590 0.2781 15 8 7.7830 7.6894 0.4725 16 6 6.4527 9.6385 0.4502 17 6 7.7412 10.3017 0.8638 18 6 8.2054 10.4094 2.1254 19 6 9.4357 11.0933 2.0649 20 6 9.6723 11.3848 0.7698 21 6 10.8748 12.1190 0.2349 22 8 10.4599 13.3640 -0.3311 23 14 12.0761 12.4374 1.6227 24 7 8.6357 10.9014 0.0277 25 6 4.8918 5.2505 -1.2232 26 6 1.9214 3.6054 -0.0011 27 6 1.2921 2.3751 -0.0005 28 1 -0.3634 0.5138 -0.8900 29 1 -0.3633 -1.0277 0.0005 30 1 -0.3634 0.5138 0.8900 31 1 5.1361 2.5793 -0.0011 32 1 5.1353 5.5993 1.7966 33 1 5.7366 4.0923 0.9789 34 1 4.7825 7.7335 -0.2472 35 1 6.1110 10.0654 -0.4927 36 1 5.6966 9.8020 1.2182 37 1 7.7238 10.0376 3.0177 38 1 10.0707 11.3417 2.9024 39 1 11.3580 11.5143 -0.5325 40 1 10.0209 13.9544 0.2965 41 1 13.2667 13.1605 1.1080 42 1 11.4194 13.2342 2.6900 43 1 8.5490 10.9723 -0.9357 44 1 5.2672 4.3285 -1.6674 45 1 4.4691 5.9345 -1.9592 46 1 1.3339 4.5115 -0.0060 47 1 0.2136 2.3200 0.0003 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_9824364_14644196.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 12:37:47 Heat of formation + Delta-G solvation = -48.724333 kcal Electronic energy + Delta-G solvation = -30639.465418 eV Core-core repulsion = 26091.382023 eV Total energy + Delta-G solvation = -4548.083395 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 361.152 amu Computer time = 1.28 seconds Orbital eigenvalues (eV) -49.88432 -42.33338 -41.57200 -40.77619 -39.63737 -37.96410 -37.78693 -34.45278 -33.00317 -31.91930 -31.75846 -31.19658 -29.36657 -28.44469 -26.66336 -25.96136 -25.03268 -23.87113 -22.73071 -22.08495 -21.35204 -21.00303 -20.22344 -19.40228 -18.99907 -18.34539 -17.84460 -17.74367 -17.26445 -17.19582 -16.62143 -16.44027 -16.32224 -16.09774 -16.06838 -15.69123 -15.44035 -15.27893 -15.11046 -14.77701 -14.59497 -14.20929 -14.14645 -14.02478 -13.92050 -13.80244 -13.59700 -13.53848 -13.37688 -13.07436 -12.87021 -12.74152 -12.21074 -12.17819 -12.14292 -11.99708 -11.83824 -11.44355 -11.20962 -10.96492 -10.80644 -10.04964 -9.94268 -9.78893 -9.12037 -8.96208 -4.85451 0.09435 0.17002 1.11588 1.27296 1.64462 1.66324 1.88731 1.90276 2.18148 2.30532 2.47446 2.52940 3.18043 3.39508 3.48996 3.67027 3.68924 3.73157 3.74516 3.80979 3.93602 4.01005 4.06895 4.20752 4.24152 4.28141 4.33883 4.34128 4.44253 4.50543 4.51583 4.63989 4.67732 4.69466 4.80253 4.81458 4.87284 4.91780 4.93676 5.05480 5.09282 5.13182 5.23607 5.26550 5.30114 5.49781 5.64131 5.69083 5.99925 6.14071 6.26215 6.43785 6.56947 6.69197 7.31293 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.341 6.341 3 C 0.074 3.926 4 C 0.033 3.967 5 F -0.154 7.154 6 C -0.116 4.116 7 C -0.080 4.080 8 C -0.056 4.056 9 H 0.128 0.872 10 C -0.147 4.147 11 C 0.116 3.884 12 H 0.077 0.923 13 N -0.699 5.699 14 C 0.513 3.487 15 O -0.576 6.576 16 C -0.066 4.066 17 C 0.034 3.966 18 C -0.201 4.201 19 C -0.202 4.202 20 C -0.018 4.018 21 C -0.060 4.060 22 O -0.552 6.552 23 Si 0.787 3.213 24 N -0.537 5.537 25 C -0.127 4.127 26 C -0.076 4.076 27 C -0.179 4.179 28 H 0.072 0.928 29 H 0.113 0.887 30 H 0.071 0.929 31 H 0.147 0.853 32 H 0.073 0.927 33 H 0.087 0.913 34 H 0.419 0.581 35 H 0.129 0.871 36 H 0.145 0.855 37 H 0.141 0.859 38 H 0.148 0.852 39 H 0.118 0.882 40 H 0.388 0.612 41 H -0.296 1.296 42 H -0.280 1.280 43 H 0.419 0.581 44 H 0.092 0.908 45 H 0.094 0.906 46 H 0.165 0.835 47 H 0.161 0.839 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.786 3.044 -0.876 9.339 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.256 6.256 3 C 0.028 3.972 4 C 0.014 3.986 5 F -0.132 7.132 6 C -0.134 4.134 7 C -0.081 4.081 8 C -0.074 4.074 9 H 0.146 0.854 10 C -0.185 4.185 11 C 0.010 3.990 12 H 0.096 0.904 13 N -0.352 5.352 14 C 0.300 3.700 15 O -0.454 6.454 16 C -0.106 4.106 17 C -0.080 4.080 18 C -0.225 4.225 19 C -0.227 4.227 20 C -0.132 4.132 21 C -0.169 4.169 22 O -0.360 6.360 23 Si 0.690 3.310 24 N -0.132 5.132 25 C -0.165 4.165 26 C -0.094 4.094 27 C -0.198 4.198 28 H 0.090 0.910 29 H 0.132 0.868 30 H 0.090 0.910 31 H 0.165 0.835 32 H 0.092 0.908 33 H 0.105 0.895 34 H 0.257 0.743 35 H 0.147 0.853 36 H 0.162 0.838 37 H 0.159 0.841 38 H 0.166 0.834 39 H 0.136 0.864 40 H 0.237 0.763 41 H -0.224 1.224 42 H -0.206 1.206 43 H 0.256 0.744 44 H 0.110 0.890 45 H 0.113 0.887 46 H 0.183 0.817 47 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges -7.244 2.822 -0.977 7.835 hybrid contribution -1.007 0.320 -0.611 1.220 sum -8.251 3.142 -1.588 8.970 Atomic orbital electron populations 1.23405 0.75733 1.05715 1.02785 1.86110 1.24104 1.26540 1.88813 1.19334 0.90890 0.86598 1.00396 1.17434 0.86716 0.83182 1.11315 1.91449 1.76908 1.50219 1.94668 1.21013 1.01620 0.89568 1.01235 1.19646 0.93480 0.94250 1.00683 1.21584 0.95268 0.93759 0.96744 0.85371 1.23565 0.96218 1.00574 0.98187 1.21767 0.99656 0.80375 0.97195 0.90432 1.45523 1.13316 1.06747 1.69567 1.21015 0.83972 0.89561 0.75437 1.90762 1.26124 1.77410 1.51101 1.20253 0.94310 0.89185 1.06897 1.19949 0.94781 1.03086 0.90170 1.20850 0.98089 1.06882 0.96684 1.20915 0.99599 1.06778 0.95432 1.20884 0.93571 1.06894 0.91837 1.24908 0.97897 0.85147 1.08924 1.86547 1.79817 1.28419 1.41186 0.93245 0.75316 0.87723 0.74670 1.41889 1.17260 1.44472 1.09594 1.23386 0.95351 1.01444 0.96348 1.21328 0.93818 0.98101 0.96181 1.21473 1.01503 0.90891 1.05891 0.90981 0.86846 0.91045 0.83531 0.90841 0.89504 0.74259 0.85297 0.83754 0.84133 0.83402 0.86399 0.76282 1.22377 1.20588 0.74351 0.88989 0.88744 0.81723 0.82139 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.06 9.81 113.37 1.11 1.05 16 2 O -0.34 -2.18 10.36 -93.08 -0.96 -3.15 16 3 C 0.07 0.37 6.69 22.53 0.15 0.52 16 4 C 0.03 0.24 7.31 22.45 0.16 0.40 16 5 F -0.15 -1.90 17.11 44.97 0.77 -1.13 16 6 C -0.12 -0.17 8.58 22.30 0.19 0.02 16 7 C -0.08 0.28 5.29 -19.85 -0.11 0.17 16 8 C -0.06 0.45 3.86 -11.02 -0.04 0.40 16 9 H 0.13 -1.66 8.09 -2.39 -0.02 -1.68 16 10 C -0.15 0.61 7.25 31.12 0.23 0.84 16 11 C 0.12 -0.42 4.32 45.52 0.20 -0.23 16 12 H 0.08 0.20 7.46 -2.39 -0.02 0.18 16 13 N -0.70 4.62 5.26 -440.03 -2.32 2.30 16 14 C 0.51 -0.20 7.82 87.66 0.69 0.48 16 15 O -0.58 -6.29 15.63 -3.01 -0.05 -6.34 16 16 C -0.07 0.41 6.24 29.10 0.18 0.60 16 17 C 0.03 0.06 5.66 41.08 0.23 0.29 16 18 C -0.20 -0.91 10.77 22.14 0.24 -0.68 16 19 C -0.20 -0.92 9.37 22.14 0.21 -0.71 16 20 C -0.02 -0.06 6.50 41.08 0.27 0.20 16 21 C -0.06 -0.09 3.08 71.24 0.22 0.13 16 22 O -0.55 -1.74 12.88 -148.98 -1.92 -3.66 16 23 Si 0.79 0.10 30.60 68.60 2.10 2.20 16 24 N -0.54 -1.05 6.07 -171.11 -1.04 -2.09 16 25 C -0.13 0.95 7.29 31.12 0.23 1.18 16 26 C -0.08 0.39 9.70 22.26 0.22 0.61 16 27 C -0.18 0.36 9.04 22.36 0.20 0.56 16 28 H 0.07 -0.47 7.66 -2.39 -0.02 -0.49 16 29 H 0.11 -0.68 8.14 -2.39 -0.02 -0.70 16 30 H 0.07 -0.46 7.66 -2.39 -0.02 -0.48 16 31 H 0.15 -0.06 6.65 -2.91 -0.02 -0.08 16 32 H 0.07 -0.23 8.14 -2.39 -0.02 -0.25 16 33 H 0.09 -0.21 6.31 -2.38 -0.02 -0.22 16 34 H 0.42 -5.86 8.70 -92.70 -0.81 -6.67 16 35 H 0.13 -1.54 8.14 -2.39 -0.02 -1.56 16 36 H 0.14 -1.67 8.14 -2.39 -0.02 -1.69 16 37 H 0.14 0.34 8.06 -2.91 -0.02 0.32 16 38 H 0.15 0.25 6.24 -2.91 -0.02 0.23 16 39 H 0.12 0.05 7.96 -2.39 -0.02 0.03 16 40 H 0.39 -0.82 8.70 -74.05 -0.64 -1.47 16 41 H -0.30 -1.93 7.11 99.48 0.71 -1.22 16 42 H -0.28 -1.09 7.11 99.48 0.71 -0.38 16 43 H 0.42 -0.66 8.96 -92.71 -0.83 -1.49 16 44 H 0.09 -0.51 7.72 -2.38 -0.02 -0.53 16 45 H 0.09 -0.96 8.14 -2.38 -0.02 -0.98 16 46 H 0.17 -1.93 8.05 -2.92 -0.02 -1.96 16 47 H 0.16 -1.16 6.30 -2.91 -0.02 -1.18 16 Total: 0.00 -28.24 395.96 -0.04 -28.28 By element: Atomic # 1 Polarization: -21.07 SS G_CDS: -1.19 Total: -22.26 kcal Atomic # 6 Polarization: 1.27 SS G_CDS: 4.57 Total: 5.84 kcal Atomic # 7 Polarization: 3.57 SS G_CDS: -3.36 Total: 0.21 kcal Atomic # 8 Polarization: -10.21 SS G_CDS: -2.93 Total: -13.14 kcal Atomic # 9 Polarization: -1.90 SS G_CDS: 0.77 Total: -1.13 kcal Atomic # 14 Polarization: 0.10 SS G_CDS: 2.10 Total: 2.20 kcal Total: -28.24 -0.04 -28.28 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_9824364_14644196.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -20.448 kcal (2) G-P(sol) polarization free energy of solvation -28.236 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -48.684 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.040 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.276 kcal (6) G-S(sol) free energy of system = (1) + (5) -48.724 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.28 seconds