Wall clock time and date at job start Thu Mar 4 2021 12:38:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35957 * 116.99668 * 2 1 4 4 C 1.38911 * 120.06266 * 179.97438 * 3 2 1 5 5 F 1.35095 * 120.04758 * 0.02562 * 4 3 2 6 6 C 1.38329 * 119.90533 * 179.97438 * 4 3 2 7 7 C 1.38257 * 120.02900 * 0.02562 * 6 4 3 8 8 C 1.50702 * 119.93528 * 179.97438 * 7 6 4 9 9 H 1.09004 * 112.84902 * 348.80487 * 8 7 6 10 10 C 1.53785 * 113.61202 * 120.00365 * 8 7 6 11 11 C 1.53784 * 87.08103 * 139.98370 * 10 8 7 12 12 H 1.09000 * 113.61503 * 219.93823 * 11 10 8 13 13 N 1.46499 * 113.61758 * 89.11402 * 11 10 8 14 14 C 1.34777 * 119.99665 * 156.80808 * 13 11 10 15 15 O 1.21283 * 119.99990 * 359.71991 * 14 13 11 16 16 C 1.50698 * 119.99538 * 179.72653 * 14 13 11 17 17 O 1.42908 * 109.46887 * 180.02562 * 16 14 13 18 18 C 1.35899 * 116.99727 * 179.97438 * 17 16 14 19 19 C 1.38734 * 120.05955 * 359.72512 * 18 17 16 20 20 C 1.38144 * 119.94091 * 179.69761 * 19 18 17 21 21 C 1.38261 * 120.05921 * 0.59592 * 20 19 18 22 22 C 1.50700 * 119.94389 * 179.69537 * 21 20 19 23 23 O 1.42907 * 109.46720 * 119.97902 * 22 21 20 24 24 Si 1.86298 * 109.47344 * 359.97438 * 22 21 20 25 25 C 1.38264 * 120.11093 * 359.67992 * 21 20 19 26 26 C 1.38146 * 120.05611 * 0.02562 * 25 21 20 27 27 C 1.53790 * 87.17067 * 334.52461 * 11 10 8 28 28 C 1.38261 * 120.12860 * 0.23545 * 7 6 4 29 29 C 1.38185 * 120.09375 * 359.48619 * 28 7 6 30 30 H 1.08992 * 109.47775 * 300.00426 * 1 2 3 31 31 H 1.09000 * 109.46726 * 60.00748 * 1 2 3 32 32 H 1.09003 * 109.46918 * 179.97438 * 1 2 3 33 33 H 1.08001 * 119.98608 * 180.02562 * 6 4 3 34 34 H 1.08994 * 113.61920 * 25.43152 * 10 8 7 35 35 H 1.09000 * 113.60993 * 254.52421 * 10 8 7 36 36 H 0.97001 * 119.99790 * 336.52521 * 13 11 10 37 37 H 1.09003 * 109.47112 * 299.99065 * 16 14 13 38 38 H 1.08993 * 109.47916 * 59.99687 * 16 14 13 39 39 H 1.08003 * 120.02498 * 359.97438 * 19 18 17 40 40 H 1.08008 * 119.96661 * 180.27236 * 20 19 18 41 41 H 1.08999 * 109.47385 * 239.97760 * 22 21 20 42 42 H 0.96696 * 113.99992 * 300.00121 * 23 22 21 43 43 H 1.48500 * 109.99926 * 58.67742 * 24 22 21 44 44 H 1.48494 * 109.99962 * 179.97438 * 24 22 21 45 45 H 1.08001 * 119.97081 * 180.02562 * 25 21 20 46 46 H 1.08002 * 120.02836 * 180.02562 * 26 25 21 47 47 H 1.08991 * 113.61523 * 140.03114 * 27 11 10 48 48 H 1.09003 * 113.60928 * 270.93052 * 27 11 10 49 49 H 1.07995 * 119.95284 * 179.72497 * 28 7 6 50 50 H 1.07997 * 120.01800 * 180.27761 * 29 28 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0462 1.2114 0.0000 4 6 3.4333 1.2857 0.0005 5 9 4.1713 0.1542 0.0005 6 6 4.0578 2.5200 0.0000 7 6 3.3022 3.6778 -0.0005 8 6 3.9848 5.0213 -0.0005 9 1 5.0549 4.9524 0.1949 10 6 3.6361 5.8894 -1.2211 11 6 3.5892 7.0869 -0.2574 12 1 2.7770 7.7834 -0.4656 13 7 4.8820 7.7549 -0.0880 14 6 4.9288 9.0392 0.3178 15 8 3.9005 9.6436 0.5378 16 6 6.2589 9.7244 0.4981 17 8 6.0469 11.0697 0.9310 18 6 7.1524 11.8313 1.1423 19 6 8.4155 11.2931 0.9428 20 6 9.5375 12.0714 1.1523 21 6 9.4028 13.3817 1.5724 22 6 10.6288 14.2262 1.8067 23 8 10.5943 15.3654 0.9446 24 14 12.1545 13.2200 1.4456 25 6 8.1453 13.9187 1.7775 26 6 7.0200 13.1465 1.5635 27 6 3.2657 6.0790 0.8582 28 6 1.9215 3.6054 0.0044 29 6 1.2922 2.3751 -0.0009 30 1 -0.3634 0.5138 0.8898 31 1 -0.3633 0.5137 -0.8901 32 1 -0.3633 -1.0277 -0.0005 33 1 5.1362 2.5793 0.0000 34 1 2.6706 5.6492 -1.6663 35 1 4.4386 5.9517 -1.9561 36 1 5.7044 7.2714 -0.2639 37 1 6.8443 9.1903 1.2466 38 1 6.7973 9.7279 -0.4496 39 1 8.5213 10.2680 0.6196 40 1 10.5209 11.6541 0.9928 41 1 10.6491 14.5569 2.8452 42 1 10.5748 15.1458 0.0032 43 1 12.1234 12.7363 0.0419 44 1 13.3703 14.0417 1.6724 45 1 8.0428 14.9426 2.1052 46 1 6.0379 13.5665 1.7234 47 1 3.7691 6.2943 1.8006 48 1 2.1990 5.8905 0.9803 49 1 1.3340 4.5115 0.0084 50 1 0.2136 2.3200 -0.0016 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_9824364_2989410.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 12:38:06 Heat of formation + Delta-G solvation = -94.398093 kcal Electronic energy + Delta-G solvation = -33632.334794 eV Core-core repulsion = 28700.788414 eV Total energy + Delta-G solvation = -4931.546380 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 388.156 amu Computer time = 1.49 seconds Orbital eigenvalues (eV) -49.86748 -41.77726 -41.33925 -40.75901 -39.80909 -38.95056 -37.90546 -37.21134 -34.55065 -32.39979 -31.85068 -31.73537 -31.29487 -29.54560 -28.31752 -26.65850 -26.29849 -25.70946 -24.11618 -23.79782 -22.75507 -22.37145 -21.78876 -20.28435 -19.51581 -19.38419 -18.47515 -18.27021 -17.95029 -17.60858 -17.41554 -17.18906 -17.10244 -16.79410 -16.35239 -16.23978 -16.10452 -16.09008 -15.72134 -15.55065 -15.54378 -15.30617 -15.15809 -14.72589 -14.59788 -14.36125 -14.08744 -13.73409 -13.69763 -13.62574 -13.53089 -13.46080 -13.31356 -13.05901 -12.96898 -12.35785 -12.28359 -12.19962 -12.12609 -12.04118 -11.81644 -11.61885 -11.46834 -11.25473 -11.00399 -10.58244 -10.14042 -10.02244 -9.95766 -9.21965 -9.11739 -4.89935 0.09226 0.17557 0.28717 0.32417 1.34887 1.44376 1.48562 1.62303 1.99793 2.18377 2.47069 2.60238 2.66460 3.18085 3.44886 3.47945 3.53102 3.60412 3.71730 3.75638 3.78268 3.84173 3.96058 3.96980 4.04667 4.06140 4.13250 4.18211 4.23391 4.32473 4.33029 4.33198 4.44145 4.52511 4.57263 4.64605 4.69033 4.71128 4.81219 4.85275 4.90588 4.92272 4.98826 5.04708 5.09073 5.17347 5.17698 5.18574 5.26990 5.44989 5.50901 5.63784 5.65251 5.71538 6.25563 6.28039 6.48554 6.51616 7.14692 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.340 6.340 3 C 0.073 3.927 4 C 0.034 3.966 5 F -0.152 7.152 6 C -0.110 4.110 7 C -0.078 4.078 8 C -0.060 4.060 9 H 0.119 0.881 10 C -0.123 4.123 11 C 0.114 3.886 12 H 0.084 0.916 13 N -0.692 5.692 14 C 0.515 3.485 15 O -0.572 6.572 16 C 0.036 3.964 17 O -0.320 6.320 18 C 0.121 3.879 19 C -0.199 4.199 20 C -0.076 4.076 21 C -0.159 4.159 22 C -0.082 4.082 23 O -0.552 6.552 24 Si 0.771 3.229 25 C -0.061 4.061 26 C -0.167 4.167 27 C -0.143 4.143 28 C -0.083 4.083 29 C -0.179 4.179 30 H 0.070 0.930 31 H 0.071 0.929 32 H 0.114 0.886 33 H 0.158 0.842 34 H 0.103 0.897 35 H 0.092 0.908 36 H 0.422 0.578 37 H 0.129 0.871 38 H 0.126 0.874 39 H 0.166 0.834 40 H 0.153 0.847 41 H 0.121 0.879 42 H 0.385 0.615 43 H -0.278 1.278 44 H -0.308 1.308 45 H 0.132 0.868 46 H 0.126 0.874 47 H 0.070 0.930 48 H 0.099 0.901 49 H 0.155 0.845 50 H 0.158 0.842 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.520 -3.970 -1.238 4.428 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.255 6.255 3 C 0.027 3.973 4 C 0.015 3.985 5 F -0.131 7.131 6 C -0.129 4.129 7 C -0.079 4.079 8 C -0.078 4.078 9 H 0.137 0.863 10 C -0.161 4.161 11 C 0.009 3.991 12 H 0.102 0.898 13 N -0.346 5.346 14 C 0.302 3.698 15 O -0.450 6.450 16 C -0.042 4.042 17 O -0.233 6.233 18 C 0.076 3.924 19 C -0.218 4.218 20 C -0.093 4.093 21 C -0.159 4.159 22 C -0.191 4.191 23 O -0.360 6.360 24 Si 0.677 3.323 25 C -0.079 4.079 26 C -0.185 4.185 27 C -0.182 4.182 28 C -0.101 4.101 29 C -0.198 4.198 30 H 0.088 0.912 31 H 0.089 0.911 32 H 0.132 0.868 33 H 0.175 0.825 34 H 0.121 0.879 35 H 0.111 0.889 36 H 0.260 0.740 37 H 0.146 0.854 38 H 0.144 0.856 39 H 0.183 0.817 40 H 0.170 0.830 41 H 0.139 0.861 42 H 0.235 0.765 43 H -0.204 1.204 44 H -0.237 1.237 45 H 0.150 0.850 46 H 0.144 0.856 47 H 0.089 0.911 48 H 0.118 0.882 49 H 0.173 0.827 50 H 0.175 0.825 Dipole moment (debyes) X Y Z Total from point charges 1.390 -3.505 -0.987 3.898 hybrid contribution -0.379 0.184 -0.902 0.995 sum 1.011 -3.321 -1.889 3.952 Atomic orbital electron populations 1.23393 0.75822 1.05705 1.02699 1.86109 1.24010 1.26525 1.88821 1.19345 0.91077 0.86439 1.00434 1.17454 0.86559 0.83361 1.11143 1.91453 1.76801 1.50185 1.94640 1.21128 1.01948 0.89114 1.00699 1.19622 0.93304 0.94332 1.00631 1.21635 1.00467 0.88525 0.97221 0.86328 1.23394 1.04426 0.92212 0.96077 1.21865 0.86041 0.93552 0.97641 0.89804 1.45347 1.10040 1.11033 1.68158 1.20542 0.90698 0.82360 0.76225 1.90770 1.37362 1.65951 1.50964 1.22765 0.95248 0.81670 1.04526 1.86130 1.30752 1.24042 1.82410 1.19209 0.85948 0.91152 0.96062 1.21505 0.90442 1.02684 1.07136 1.21069 0.99196 0.92732 0.96309 1.20284 0.95356 0.95681 1.04611 1.25241 1.03439 0.92144 0.98249 1.86569 1.95847 1.32169 1.21394 0.94159 0.72419 0.82729 0.83041 1.20900 0.90942 0.99621 0.96416 1.20620 1.00106 0.92436 1.05383 1.23639 1.02107 0.94625 0.97817 1.21210 0.94312 0.97746 0.96809 1.21417 1.01400 0.90915 1.06018 0.91173 0.91089 0.86779 0.82458 0.87886 0.88931 0.73977 0.85353 0.85623 0.81652 0.82959 0.86133 0.76536 1.20443 1.23677 0.84965 0.85628 0.91146 0.88249 0.82710 0.82477 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.06 9.81 113.37 1.11 1.05 16 2 O -0.34 -2.06 10.36 -93.07 -0.96 -3.02 16 3 C 0.07 0.33 6.69 22.53 0.15 0.48 16 4 C 0.03 0.20 7.31 22.45 0.16 0.36 16 5 F -0.15 -1.59 17.11 44.97 0.77 -0.82 16 6 C -0.11 0.08 9.68 22.30 0.22 0.30 16 7 C -0.08 0.34 5.29 -19.85 -0.11 0.23 16 8 C -0.06 0.54 3.87 -10.92 -0.04 0.50 16 9 H 0.12 -1.45 8.09 -2.38 -0.02 -1.47 16 10 C -0.12 1.18 7.29 31.12 0.23 1.40 16 11 C 0.11 -0.64 4.29 45.52 0.20 -0.44 16 12 H 0.08 -0.01 7.50 -2.39 -0.02 -0.03 16 13 N -0.69 5.08 5.26 -440.02 -2.32 2.76 16 14 C 0.52 0.13 7.91 87.66 0.69 0.82 16 15 O -0.57 -7.09 16.12 16.00 0.26 -6.83 16 16 C 0.04 -0.19 5.22 71.24 0.37 0.18 16 17 O -0.32 -1.40 9.67 -73.37 -0.71 -2.11 16 18 C 0.12 0.26 6.69 22.51 0.15 0.41 16 19 C -0.20 0.78 9.04 22.37 0.20 0.99 16 20 C -0.08 0.29 8.66 22.25 0.19 0.48 16 21 C -0.16 0.10 5.39 -19.85 -0.11 -0.01 16 22 C -0.08 0.10 2.82 71.24 0.20 0.30 16 23 O -0.55 -1.38 12.77 -148.98 -1.90 -3.28 16 24 Si 0.77 -2.74 29.78 68.60 2.04 -0.70 16 25 C -0.06 -0.13 9.60 22.25 0.21 0.08 16 26 C -0.17 -0.67 9.99 22.37 0.22 -0.45 16 27 C -0.14 0.93 7.27 31.22 0.23 1.16 16 28 C -0.08 0.36 8.62 22.26 0.19 0.55 16 29 C -0.18 0.28 9.04 22.36 0.20 0.48 16 30 H 0.07 -0.42 7.66 -2.39 -0.02 -0.44 16 31 H 0.07 -0.44 7.66 -2.39 -0.02 -0.46 16 32 H 0.11 -0.67 8.14 -2.39 -0.02 -0.69 16 33 H 0.16 -0.78 8.05 -2.91 -0.02 -0.80 16 34 H 0.10 -0.97 7.73 -2.39 -0.02 -0.99 16 35 H 0.09 -1.06 8.14 -2.39 -0.02 -1.08 16 36 H 0.42 -6.33 8.70 -92.71 -0.81 -7.14 16 37 H 0.13 -1.56 7.65 -2.39 -0.02 -1.58 16 38 H 0.13 -1.48 7.67 -2.39 -0.02 -1.50 16 39 H 0.17 -1.91 6.30 -2.91 -0.02 -1.93 16 40 H 0.15 -1.35 4.87 -2.91 -0.01 -1.36 16 41 H 0.12 -0.27 7.96 -2.39 -0.02 -0.28 16 42 H 0.39 -1.21 8.70 -74.06 -0.64 -1.86 16 43 H -0.28 0.18 7.11 99.48 0.71 0.89 16 44 H -0.31 -1.54 7.11 99.48 0.71 -0.84 16 45 H 0.13 0.19 8.06 -2.91 -0.02 0.17 16 46 H 0.13 0.59 8.06 -2.91 -0.02 0.56 16 47 H 0.07 -0.32 8.14 -2.39 -0.02 -0.34 16 48 H 0.10 -0.69 6.30 -2.39 -0.02 -0.70 16 49 H 0.16 -1.37 6.63 -2.91 -0.02 -1.39 16 50 H 0.16 -0.97 6.30 -2.91 -0.02 -0.99 16 Total: 0.00 -30.82 418.10 1.46 -29.36 By element: Atomic # 1 Polarization: -23.84 SS G_CDS: -0.40 Total: -24.24 kcal Atomic # 6 Polarization: 4.21 SS G_CDS: 4.68 Total: 8.89 kcal Atomic # 7 Polarization: 5.08 SS G_CDS: -2.32 Total: 2.76 kcal Atomic # 8 Polarization: -11.93 SS G_CDS: -3.32 Total: -15.25 kcal Atomic # 9 Polarization: -1.59 SS G_CDS: 0.77 Total: -0.82 kcal Atomic # 14 Polarization: -2.74 SS G_CDS: 2.04 Total: -0.70 kcal Total: -30.82 1.46 -29.36 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_9824364_2989410.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -65.040 kcal (2) G-P(sol) polarization free energy of solvation -30.818 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -95.858 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.460 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.358 kcal (6) G-S(sol) free energy of system = (1) + (5) -94.398 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.50 seconds