Wall clock time and date at job start Thu Mar 4 2021 12:38:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42906 * 1 3 3 C 1.35960 * 116.99750 * 2 1 4 4 C 1.38905 * 120.06139 * 180.02562 * 3 2 1 5 5 F 1.35102 * 120.04563 * 359.95852 * 4 3 2 6 6 C 1.38337 * 119.90501 * 179.68061 * 4 3 2 7 7 C 1.38255 * 120.02722 * 0.57234 * 6 4 3 8 8 C 1.50699 * 119.93537 * 179.72330 * 7 6 4 9 9 H 1.09003 * 112.84432 * 190.92221 * 8 7 6 10 10 C 1.53779 * 113.69243 * 322.19085 * 8 7 6 11 11 C 1.53778 * 87.08172 * 139.99287 * 10 8 7 12 12 H 1.09000 * 113.69374 * 220.01423 * 11 10 8 13 13 N 1.46497 * 113.61480 * 89.11599 * 11 10 8 14 14 C 1.34773 * 120.00031 * 107.50390 * 13 11 10 15 15 O 1.21283 * 120.00056 * 359.97438 * 14 13 11 16 16 C 1.50700 * 120.00214 * 179.97438 * 14 13 11 17 17 O 1.42904 * 109.47305 * 180.02562 * 16 14 13 18 18 C 1.35898 * 116.99761 * 180.02562 * 17 16 14 19 19 C 1.38716 * 120.05113 * 180.02562 * 18 17 16 20 20 C 1.38166 * 119.94287 * 180.02562 * 19 18 17 21 21 C 1.50702 * 119.97264 * 179.97438 * 20 19 18 22 22 O 1.42892 * 109.47242 * 64.99337 * 21 20 19 23 23 Si 1.86298 * 109.46915 * 184.99876 * 21 20 19 24 24 C 1.38243 * 120.05222 * 0.24488 * 20 19 18 25 25 C 1.38288 * 120.11731 * 359.49540 * 24 20 19 26 26 C 1.38126 * 120.04997 * 0.50905 * 25 24 20 27 27 C 1.53777 * 113.61579 * 59.72832 * 8 7 6 28 28 C 1.38260 * 120.12485 * 359.44849 * 7 6 4 29 29 C 1.38184 * 120.09854 * 0.25470 * 28 7 6 30 30 H 1.08996 * 109.47153 * 300.00109 * 1 2 3 31 31 H 1.09007 * 109.46852 * 60.00077 * 1 2 3 32 32 H 1.08999 * 109.47063 * 179.97438 * 1 2 3 33 33 H 1.07998 * 119.98190 * 180.29559 * 6 4 3 34 34 H 1.08998 * 113.61007 * 25.44518 * 10 8 7 35 35 H 1.09002 * 113.61386 * 254.54358 * 10 8 7 36 36 H 0.97002 * 119.99881 * 287.49870 * 13 11 10 37 37 H 1.08999 * 109.47031 * 60.00086 * 16 14 13 38 38 H 1.08995 * 109.47257 * 299.99946 * 16 14 13 39 39 H 1.08002 * 120.02972 * 0.03278 * 19 18 17 40 40 H 1.09000 * 109.46724 * 304.99383 * 21 20 19 41 41 H 0.96703 * 114.00176 * 180.02562 * 22 21 20 42 42 H 1.48506 * 109.99834 * 178.68053 * 23 21 20 43 43 H 1.48502 * 110.00011 * 299.99318 * 23 21 20 44 44 H 1.08001 * 119.94099 * 179.72742 * 24 20 19 45 45 H 1.07993 * 119.97508 * 180.23029 * 25 24 20 46 46 H 1.07994 * 120.02621 * 179.77206 * 26 25 24 47 47 H 1.08998 * 113.61934 * 105.38226 * 27 8 7 48 48 H 1.09003 * 113.61292 * 334.48606 * 27 8 7 49 49 H 1.08001 * 119.95504 * 180.27077 * 28 7 6 50 50 H 1.07998 * 120.01840 * 179.97438 * 29 28 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0463 1.2114 0.0000 4 6 3.4333 1.2857 -0.0005 5 9 4.1713 0.1540 -0.0002 6 6 4.0579 2.5200 -0.0072 7 6 3.3023 3.6778 -0.0014 8 6 3.9850 5.0213 -0.0024 9 1 3.2983 5.8450 0.1928 10 6 5.2610 5.0667 0.8546 11 6 5.8853 5.9217 -0.2607 12 1 6.9270 5.6773 -0.4689 13 7 5.6608 7.3596 -0.0933 14 6 6.6786 8.1621 0.2759 15 8 7.7804 7.6937 0.4700 16 6 6.4478 9.6414 0.4476 17 8 7.6691 10.2718 0.8389 18 6 7.6336 11.6158 1.0374 19 6 8.7832 12.2923 1.4180 20 6 8.7445 13.6587 1.6197 21 6 9.9929 14.3943 2.0338 22 8 10.9605 14.3184 0.9850 23 14 9.5792 16.1795 2.3692 24 6 7.5601 14.3506 1.4475 25 6 6.4139 13.6792 1.0630 26 6 6.4475 12.3134 0.8601 27 6 4.8912 5.2510 -1.2234 28 6 1.9216 3.6053 -0.0004 29 6 1.2923 2.3751 0.0001 30 1 -0.3633 0.5138 0.8899 31 1 -0.3633 0.5139 -0.8901 32 1 -0.3633 -1.0277 -0.0005 33 1 5.1363 2.5791 -0.0125 34 1 5.7383 4.0947 0.9787 35 1 5.1357 5.6012 1.7963 36 1 4.7795 7.7341 -0.2483 37 1 5.6920 9.8044 1.2158 38 1 6.1053 10.0675 -0.4953 39 1 9.7079 11.7516 1.5564 40 1 10.3997 13.9397 2.9371 41 1 11.7917 14.7711 1.1832 42 1 10.7958 16.9088 2.8092 43 1 9.0236 16.8108 1.1453 44 1 7.5308 15.4179 1.6100 45 1 5.4908 14.2226 0.9255 46 1 5.5512 11.7889 0.5634 47 1 4.4674 5.9342 -1.9594 48 1 5.2674 4.3293 -1.6674 49 1 1.3340 4.5115 -0.0003 50 1 0.2137 2.3200 0.0013 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_9824364_4860298.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 12:38:46 Heat of formation + Delta-G solvation = -93.262533 kcal Electronic energy + Delta-G solvation = -33685.848155 eV Core-core repulsion = 28754.351016 eV Total energy + Delta-G solvation = -4931.497138 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 388.156 amu Computer time = 1.44 seconds Orbital eigenvalues (eV) -49.88573 -41.79452 -41.33275 -40.76928 -39.81566 -38.85944 -37.91862 -37.39184 -34.59025 -32.59528 -31.80841 -31.75805 -31.19786 -29.26807 -28.41081 -26.82275 -26.69001 -25.67330 -23.90119 -23.65194 -22.96690 -22.42953 -21.58215 -20.28720 -19.42311 -19.17241 -18.59556 -18.35633 -17.92192 -17.79345 -17.43596 -17.40484 -17.19688 -17.06089 -16.64201 -16.20341 -16.10019 -15.81970 -15.78115 -15.62247 -15.49579 -15.30517 -15.06228 -14.61210 -14.52747 -14.16975 -14.11849 -13.92751 -13.76052 -13.63827 -13.55485 -13.45273 -13.29168 -13.08476 -12.87208 -12.51621 -12.23322 -12.16352 -12.11506 -12.03491 -11.97501 -11.69644 -11.47103 -11.24435 -11.03501 -10.54941 -10.17592 -9.95463 -9.90670 -9.27472 -9.12444 -4.91569 0.09408 0.16680 0.21361 0.40215 1.26875 1.41654 1.47727 1.62323 1.94968 2.18077 2.47109 2.57375 2.64447 3.17751 3.38678 3.45981 3.51894 3.65480 3.69860 3.72724 3.80183 3.85016 3.92852 3.98503 4.02477 4.11237 4.14402 4.20484 4.26307 4.27102 4.28267 4.33461 4.34156 4.49321 4.50925 4.62990 4.66733 4.68960 4.78352 4.83493 4.88222 4.91774 4.98586 5.03198 5.07991 5.11471 5.19560 5.24440 5.37435 5.44346 5.47723 5.61230 5.65594 5.69991 6.26119 6.28411 6.47562 6.55511 7.13089 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.342 6.342 3 C 0.074 3.926 4 C 0.032 3.968 5 F -0.154 7.154 6 C -0.116 4.116 7 C -0.080 4.080 8 C -0.055 4.055 9 H 0.131 0.869 10 C -0.147 4.147 11 C 0.114 3.886 12 H 0.078 0.922 13 N -0.688 5.688 14 C 0.514 3.486 15 O -0.575 6.575 16 C 0.038 3.962 17 O -0.324 6.324 18 C 0.114 3.886 19 C -0.152 4.152 20 C -0.047 4.047 21 C -0.099 4.099 22 O -0.561 6.561 23 Si 0.782 3.218 24 C -0.161 4.161 25 C -0.070 4.070 26 C -0.201 4.201 27 C -0.126 4.126 28 C -0.075 4.075 29 C -0.179 4.179 30 H 0.071 0.929 31 H 0.072 0.928 32 H 0.113 0.887 33 H 0.147 0.853 34 H 0.088 0.912 35 H 0.074 0.926 36 H 0.424 0.576 37 H 0.130 0.870 38 H 0.126 0.874 39 H 0.112 0.888 40 H 0.089 0.911 41 H 0.395 0.605 42 H -0.288 1.288 43 H -0.292 1.292 44 H 0.145 0.855 45 H 0.165 0.835 46 H 0.165 0.835 47 H 0.097 0.903 48 H 0.094 0.906 49 H 0.167 0.833 50 H 0.162 0.838 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.916 5.990 1.036 13.377 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.256 6.256 3 C 0.028 3.972 4 C 0.013 3.987 5 F -0.133 7.133 6 C -0.135 4.135 7 C -0.081 4.081 8 C -0.073 4.073 9 H 0.149 0.851 10 C -0.186 4.186 11 C 0.008 3.992 12 H 0.097 0.903 13 N -0.343 5.343 14 C 0.301 3.699 15 O -0.453 6.453 16 C -0.040 4.040 17 O -0.237 6.237 18 C 0.069 3.931 19 C -0.171 4.171 20 C -0.048 4.048 21 C -0.206 4.206 22 O -0.371 6.371 23 Si 0.687 3.313 24 C -0.179 4.179 25 C -0.088 4.088 26 C -0.219 4.219 27 C -0.163 4.163 28 C -0.093 4.093 29 C -0.197 4.197 30 H 0.090 0.910 31 H 0.090 0.910 32 H 0.131 0.869 33 H 0.164 0.836 34 H 0.107 0.893 35 H 0.093 0.907 36 H 0.262 0.738 37 H 0.148 0.852 38 H 0.143 0.857 39 H 0.130 0.870 40 H 0.107 0.893 41 H 0.245 0.755 42 H -0.215 1.215 43 H -0.219 1.219 44 H 0.162 0.838 45 H 0.183 0.817 46 H 0.183 0.817 47 H 0.116 0.884 48 H 0.112 0.888 49 H 0.184 0.816 50 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges -11.188 5.747 0.698 12.597 hybrid contribution 1.284 -0.926 -0.554 1.677 sum -9.904 4.821 0.144 11.016 Atomic orbital electron populations 1.23407 0.75711 1.05704 1.02812 1.86112 1.24126 1.26571 1.88812 1.19343 0.90884 0.86623 1.00373 1.17445 0.86741 0.83188 1.11365 1.91451 1.76924 1.50236 1.94674 1.21016 1.01611 0.89597 1.01228 1.19626 0.93497 0.94163 1.00770 1.21598 0.95217 0.93919 0.96553 0.85081 1.23582 0.96313 1.00560 0.98126 1.21844 1.00029 0.79591 0.97743 0.90339 1.45285 1.12909 1.06870 1.69202 1.20588 0.84382 0.88858 0.76089 1.90774 1.26257 1.77302 1.50958 1.22751 0.87012 0.89251 1.04986 1.86120 1.35109 1.18782 1.83714 1.19157 0.95110 0.81973 0.96812 1.20311 0.97157 0.94167 1.05417 1.19253 0.94506 0.92354 0.98657 1.25258 0.89649 1.13030 0.92660 1.86555 1.28839 1.78756 1.42917 0.93938 0.83103 0.70623 0.83685 1.21207 0.92755 1.00599 1.03310 1.21326 0.98997 0.93493 0.94948 1.21646 0.97283 0.96093 1.06896 1.23394 0.95091 1.01490 0.96370 1.21334 0.93771 0.98130 0.96065 1.21480 1.01514 0.90878 1.05869 0.91008 0.90951 0.86886 0.83578 0.89332 0.90739 0.73772 0.85200 0.85650 0.86977 0.89340 0.75506 1.21490 1.21930 0.83798 0.81744 0.81713 0.88408 0.88770 0.81575 0.82100 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.06 9.81 113.37 1.11 1.05 16 2 O -0.34 -2.17 10.36 -93.10 -0.96 -3.14 16 3 C 0.07 0.36 6.69 22.53 0.15 0.51 16 4 C 0.03 0.23 7.31 22.45 0.16 0.40 16 5 F -0.15 -1.92 17.11 44.97 0.77 -1.15 16 6 C -0.12 -0.16 8.57 22.30 0.19 0.03 16 7 C -0.08 0.31 5.29 -19.86 -0.11 0.20 16 8 C -0.05 0.46 3.85 -11.02 -0.04 0.42 16 9 H 0.13 -1.82 8.09 -2.39 -0.02 -1.84 16 10 C -0.15 0.61 7.25 31.12 0.23 0.84 16 11 C 0.11 -0.36 4.32 45.52 0.20 -0.17 16 12 H 0.08 0.26 7.46 -2.39 -0.02 0.24 16 13 N -0.69 4.09 5.26 -440.05 -2.32 1.77 16 14 C 0.51 1.16 7.91 87.66 0.69 1.86 16 15 O -0.57 -8.66 16.10 16.00 0.26 -8.40 16 16 C 0.04 -0.13 5.22 71.24 0.37 0.24 16 17 O -0.32 -2.37 9.67 -73.36 -0.71 -3.08 16 18 C 0.11 0.60 6.69 22.51 0.15 0.75 16 19 C -0.15 -1.25 9.62 22.37 0.22 -1.04 16 20 C -0.05 -0.22 5.38 -19.88 -0.11 -0.33 16 21 C -0.10 -0.20 2.79 71.24 0.20 0.00 16 22 O -0.56 -3.09 12.81 -148.98 -1.91 -5.00 16 23 Si 0.78 -1.35 29.84 68.60 2.05 0.70 16 24 C -0.16 -0.05 8.67 22.28 0.19 0.14 16 25 C -0.07 0.21 10.04 22.26 0.22 0.44 16 26 C -0.20 0.44 9.04 22.37 0.20 0.64 16 27 C -0.13 0.96 7.29 31.12 0.23 1.19 16 28 C -0.08 0.42 9.70 22.26 0.22 0.64 16 29 C -0.18 0.42 9.04 22.36 0.20 0.62 16 30 H 0.07 -0.47 7.66 -2.39 -0.02 -0.49 16 31 H 0.07 -0.49 7.66 -2.38 -0.02 -0.51 16 32 H 0.11 -0.68 8.14 -2.39 -0.02 -0.70 16 33 H 0.15 -0.07 6.68 -2.91 -0.02 -0.09 16 34 H 0.09 -0.21 6.33 -2.39 -0.02 -0.23 16 35 H 0.07 -0.24 8.14 -2.39 -0.02 -0.26 16 36 H 0.42 -6.15 8.70 -92.71 -0.81 -6.96 16 37 H 0.13 -1.40 7.66 -2.39 -0.02 -1.42 16 38 H 0.13 -1.25 7.66 -2.39 -0.02 -1.27 16 39 H 0.11 1.24 8.06 -2.91 -0.02 1.22 16 40 H 0.09 -0.08 7.96 -2.39 -0.02 -0.09 16 41 H 0.39 -1.17 8.74 -74.06 -0.65 -1.81 16 42 H -0.29 -0.71 7.11 99.48 0.71 0.00 16 43 H -0.29 -1.28 7.05 99.48 0.70 -0.58 16 44 H 0.14 -0.52 4.86 -2.91 -0.01 -0.53 16 45 H 0.17 -1.62 8.06 -2.91 -0.02 -1.64 16 46 H 0.17 -1.67 6.30 -2.91 -0.02 -1.69 16 47 H 0.10 -1.05 8.14 -2.39 -0.02 -1.07 16 48 H 0.09 -0.55 7.71 -2.39 -0.02 -0.57 16 49 H 0.17 -2.07 8.05 -2.91 -0.02 -2.10 16 50 H 0.16 -1.22 6.30 -2.91 -0.02 -1.24 16 Total: 0.00 -34.92 418.19 1.45 -33.48 By element: Atomic # 1 Polarization: -23.20 SS G_CDS: -0.41 Total: -23.61 kcal Atomic # 6 Polarization: 3.75 SS G_CDS: 4.68 Total: 8.43 kcal Atomic # 7 Polarization: 4.09 SS G_CDS: -2.32 Total: 1.77 kcal Atomic # 8 Polarization: -16.29 SS G_CDS: -3.32 Total: -19.62 kcal Atomic # 9 Polarization: -1.92 SS G_CDS: 0.77 Total: -1.15 kcal Atomic # 14 Polarization: -1.35 SS G_CDS: 2.05 Total: 0.70 kcal Total: -34.92 1.45 -33.48 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_9824364_4860298.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -59.787 kcal (2) G-P(sol) polarization free energy of solvation -34.924 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -94.711 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.449 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.475 kcal (6) G-S(sol) free energy of system = (1) + (5) -93.263 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.44 seconds