Wall clock time and date at job start Thu Mar 4 2021 13:28:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.33330 * 125.94995 * 2 1 4 4 C 1.50698 * 122.70970 * 359.96842 * 3 2 1 5 5 O 1.42898 * 109.47491 * 29.99494 * 4 3 2 6 6 Si 1.86302 * 109.47113 * 149.99678 * 4 3 2 7 7 N 1.32119 * 114.57801 * 179.78988 * 3 2 1 8 8 C 1.29689 * 116.86437 * 0.51639 * 7 3 2 9 9 N 1.38618 * 124.94915 * 179.71194 * 8 7 3 10 10 C 1.46502 * 119.99978 * 180.02562 * 9 8 7 11 11 H 1.08995 * 112.84681 * 336.20026 * 10 9 8 12 12 C 1.53777 * 113.61377 * 107.50927 * 10 9 8 13 13 C 1.53773 * 87.08218 * 89.11339 * 12 10 9 14 14 C 1.53002 * 113.61425 * 139.98124 * 13 12 10 15 15 O 1.42899 * 113.61520 * 270.88363 * 13 12 10 16 16 C 1.53776 * 113.61305 * 205.00560 * 10 9 8 17 17 S 1.70968 * 110.10458 * 359.72434 * 8 7 3 18 18 H 1.09002 * 109.47152 * 179.71292 * 1 2 3 19 19 H 1.09001 * 109.46980 * 59.71392 * 1 2 3 20 20 H 1.09004 * 109.47113 * 299.71373 * 1 2 3 21 21 H 1.09001 * 109.46939 * 269.99162 * 4 3 2 22 22 H 0.96700 * 114.00104 * 180.02562 * 5 4 3 23 23 H 1.48500 * 110.00107 * 178.67681 * 6 4 3 24 24 H 1.48498 * 109.99895 * 299.99959 * 6 4 3 25 25 H 0.96993 * 119.99650 * 0.03733 * 9 8 7 26 26 H 1.08996 * 113.61622 * 203.66688 * 12 10 9 27 27 H 1.09004 * 113.61216 * 334.56073 * 12 10 9 28 28 H 1.08997 * 109.47170 * 322.50552 * 14 13 12 29 29 H 1.09004 * 109.46983 * 82.50232 * 14 13 12 30 30 H 1.08995 * 109.47084 * 202.50432 * 14 13 12 31 31 H 0.96707 * 114.00170 * 277.49514 * 15 13 12 32 32 H 1.09002 * 113.61701 * 25.42987 * 16 10 9 33 33 H 1.08997 * 113.61638 * 156.33377 * 16 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2898 1.0793 0.0000 4 6 1.7414 2.4830 -0.0007 5 8 0.4809 2.5024 0.6722 6 14 2.9318 3.6153 0.8778 7 7 3.5850 0.8188 0.0044 8 6 3.9315 -0.4309 -0.0023 9 7 5.2385 -0.8926 -0.0049 10 6 5.5066 -2.3328 -0.0132 11 1 4.6805 -2.9194 0.3887 12 6 6.0362 -2.8531 -1.3599 13 6 7.4477 -2.5393 -0.8367 14 6 8.4881 -3.5982 -1.2073 15 8 7.8819 -1.2085 -1.1238 16 6 6.8747 -2.7081 0.5803 17 16 2.5413 -1.4261 -0.0078 18 1 -0.3633 -1.0277 -0.0051 19 1 -0.3633 0.5183 -0.8874 20 1 -0.3633 0.5094 0.8926 21 1 1.6098 2.8211 -1.0285 22 1 0.0684 3.3762 0.7096 23 1 2.4177 5.0083 0.8561 24 1 3.1199 3.1650 2.2803 25 1 5.9755 -0.2620 -0.0011 26 1 5.8557 -3.9162 -1.5188 27 1 5.7399 -2.2406 -2.2115 28 1 8.0338 -4.5876 -1.1560 29 1 8.8476 -3.4155 -2.2200 30 1 9.3242 -3.5457 -0.5099 31 1 8.2434 -1.0960 -2.0137 32 1 7.2556 -1.9786 1.2951 33 1 6.9235 -3.7316 0.9520 There are 44 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 44 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_27_11245584_15704122.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:28:34 Heat of formation + Delta-G solvation = -0.894155 kcal Electronic energy + Delta-G solvation = -17318.863104 eV Core-core repulsion = 14474.121995 eV Total energy + Delta-G solvation = -2844.741109 eV No. of doubly occupied orbitals = 44 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 257.087 amu Computer time = 0.37 seconds Orbital eigenvalues (eV) -41.32799 -40.63639 -37.79221 -36.59802 -34.70699 -32.46019 -30.26280 -28.93092 -27.02916 -25.50374 -24.29726 -23.65739 -20.99395 -20.16740 -19.08056 -18.11067 -17.58386 -17.23561 -16.64926 -16.24381 -15.97391 -15.81644 -15.30298 -15.28086 -14.61970 -14.02280 -13.89267 -13.83966 -13.65859 -13.30314 -13.27274 -12.99070 -12.83425 -12.75680 -12.44783 -12.13545 -11.62752 -11.40435 -10.96252 -10.81914 -10.46680 -10.34829 -9.85577 -8.44600 -4.60562 0.17620 0.31078 0.91494 1.44793 1.81281 1.90898 2.06821 2.22773 2.86741 3.14921 3.23424 3.47199 3.57953 3.74993 3.99979 4.22574 4.30265 4.34903 4.47176 4.48991 4.50497 4.56777 4.63745 4.73053 4.85978 4.94424 4.95801 5.02504 5.07626 5.25494 5.46137 5.78482 6.45554 6.52580 6.58957 7.08588 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.056 4.056 2 C -0.233 4.233 3 C 0.105 3.895 4 C -0.041 4.041 5 O -0.535 6.535 6 Si 0.718 3.282 7 N -0.540 5.540 8 C 0.324 3.676 9 N -0.669 5.669 10 C 0.131 3.869 11 H 0.096 0.904 12 C -0.183 4.183 13 C 0.105 3.895 14 C -0.171 4.171 15 O -0.544 6.544 16 C -0.133 4.133 17 S 0.093 5.907 18 H 0.056 0.944 19 H 0.070 0.930 20 H 0.086 0.914 21 H 0.081 0.919 22 H 0.381 0.619 23 H -0.265 1.265 24 H -0.263 1.263 25 H 0.420 0.580 26 H 0.102 0.898 27 H 0.081 0.919 28 H 0.071 0.929 29 H 0.061 0.939 30 H 0.066 0.934 31 H 0.384 0.616 32 H 0.087 0.913 33 H 0.113 0.887 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.112 -3.097 -2.691 4.614 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.115 4.115 2 C -0.356 4.356 3 C -0.024 4.024 4 C -0.153 4.153 5 O -0.342 6.342 6 Si 0.619 3.381 7 N -0.267 5.267 8 C -0.047 4.047 9 N -0.310 5.310 10 C 0.024 3.976 11 H 0.114 0.886 12 C -0.222 4.222 13 C 0.064 3.936 14 C -0.228 4.228 15 O -0.350 6.350 16 C -0.171 4.171 17 S 0.341 5.659 18 H 0.075 0.925 19 H 0.089 0.911 20 H 0.104 0.896 21 H 0.099 0.901 22 H 0.230 0.770 23 H -0.191 1.191 24 H -0.188 1.188 25 H 0.261 0.739 26 H 0.120 0.880 27 H 0.100 0.900 28 H 0.090 0.910 29 H 0.080 0.920 30 H 0.085 0.915 31 H 0.233 0.767 32 H 0.106 0.894 33 H 0.131 0.869 Dipole moment (debyes) X Y Z Total from point charges 2.443 -3.946 -1.344 4.831 hybrid contribution -0.829 1.122 -0.581 1.511 sum 1.614 -2.824 -1.924 3.779 Atomic orbital electron populations 1.20067 0.86577 1.01267 1.03617 1.25089 1.01296 0.92626 1.16542 1.18722 0.86550 0.94923 1.02247 1.23986 0.92064 0.97833 1.01442 1.86543 1.33213 1.35001 1.79431 0.93625 0.87427 0.74941 0.82133 1.65587 1.16730 1.16597 1.27782 1.23194 0.91732 0.91182 0.98579 1.43618 1.01789 1.06206 1.79368 1.21802 0.98087 0.80356 0.97316 0.88640 1.24307 0.96935 1.02559 0.98411 1.22175 0.92179 0.83126 0.96161 1.22295 0.99442 0.98845 1.02218 1.86429 1.83408 1.27282 1.37891 1.23484 0.93828 1.03589 0.96204 1.83898 0.96703 1.10802 1.74463 0.92541 0.91091 0.89584 0.90111 0.77045 1.19074 1.18772 0.73901 0.87958 0.90023 0.91035 0.91952 0.91464 0.76749 0.89440 0.86901 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 -0.12 8.90 36.01 0.32 0.20 16 2 C -0.23 -0.88 6.50 -36.02 -0.23 -1.12 16 3 C 0.10 0.45 5.95 -84.18 -0.50 -0.05 16 4 C -0.04 -0.09 2.93 36.00 0.11 0.02 16 5 O -0.53 -0.81 9.81 -35.23 -0.35 -1.16 16 6 Si 0.72 1.57 32.08 -169.99 -5.45 -3.88 16 7 N -0.54 -2.45 8.94 -11.36 -0.10 -2.55 16 8 C 0.32 1.04 8.24 -87.67 -0.72 0.32 16 9 N -0.67 -0.77 5.31 -54.99 -0.29 -1.06 16 10 C 0.13 -0.13 4.31 -67.12 -0.29 -0.42 16 11 H 0.10 -0.13 7.06 -51.93 -0.37 -0.49 16 12 C -0.18 0.38 7.26 -25.92 -0.19 0.19 16 13 C 0.10 -0.22 1.82 -89.81 -0.16 -0.39 16 14 C -0.17 0.52 9.44 37.16 0.35 0.87 16 15 O -0.54 0.64 12.14 -35.23 -0.43 0.21 16 16 C -0.13 0.27 7.22 -25.92 -0.19 0.08 16 17 S 0.09 0.22 21.69 -107.50 -2.33 -2.11 16 18 H 0.06 0.06 8.14 -51.93 -0.42 -0.36 16 19 H 0.07 0.11 8.14 -51.93 -0.42 -0.32 16 20 H 0.09 0.22 6.76 -51.93 -0.35 -0.13 16 21 H 0.08 0.04 7.96 -51.93 -0.41 -0.37 16 22 H 0.38 -0.98 8.74 45.56 0.40 -0.58 16 23 H -0.26 -0.78 7.11 56.52 0.40 -0.37 16 24 H -0.26 -1.63 7.11 56.52 0.40 -1.23 16 25 H 0.42 0.61 7.71 -40.82 -0.31 0.29 16 26 H 0.10 -0.35 7.96 -51.93 -0.41 -0.76 16 27 H 0.08 -0.07 8.14 -51.93 -0.42 -0.50 16 28 H 0.07 -0.26 7.94 -51.93 -0.41 -0.68 16 29 H 0.06 -0.21 8.14 -51.93 -0.42 -0.63 16 30 H 0.07 -0.16 8.14 -51.93 -0.42 -0.59 16 31 H 0.38 -1.60 9.04 45.56 0.41 -1.19 16 32 H 0.09 -0.08 8.14 -51.93 -0.42 -0.50 16 33 H 0.11 -0.42 8.10 -51.93 -0.42 -0.84 16 LS Contribution 286.88 15.07 4.32 4.32 Total: 0.00 -6.02 286.88 -9.75 -15.77 By element: Atomic # 1 Polarization: -5.64 SS G_CDS: -3.62 Total: -9.26 kcal Atomic # 6 Polarization: 1.22 SS G_CDS: -1.51 Total: -0.29 kcal Atomic # 7 Polarization: -3.21 SS G_CDS: -0.39 Total: -3.61 kcal Atomic # 8 Polarization: -0.18 SS G_CDS: -0.77 Total: -0.95 kcal Atomic # 14 Polarization: 1.57 SS G_CDS: -5.45 Total: -3.88 kcal Atomic # 16 Polarization: 0.22 SS G_CDS: -2.33 Total: -2.11 kcal Total LS contribution 4.32 Total: 4.32 kcal Total: -6.02 -9.75 -15.77 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_27_11245584_15704122.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 14.880 kcal (2) G-P(sol) polarization free energy of solvation -6.021 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 8.859 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.753 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.774 kcal (6) G-S(sol) free energy of system = (1) + (5) -0.894 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.37 seconds