Wall clock time and date at job start Thu Mar 4 2021 15:08:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34774 * 1 3 3 O 1.21282 * 119.99971 * 2 1 4 4 C 1.50693 * 119.99820 * 180.02562 * 2 1 3 5 5 H 1.08999 * 112.85134 * 311.19179 * 4 2 1 6 6 C 1.54053 * 113.69661 * 82.46668 * 4 2 1 7 7 C 1.53780 * 86.98627 * 139.98652 * 6 4 2 8 8 H 1.09001 * 113.61314 * 219.97530 * 7 6 4 9 9 N 1.46505 * 113.61280 * 89.16273 * 7 6 4 10 10 C 1.39008 * 119.99969 * 105.86557 * 9 7 6 11 11 C 1.39091 * 119.70841 * 359.97438 * 10 9 7 12 12 C 1.38341 * 119.10330 * 180.02562 * 11 10 9 13 13 C 1.38842 * 118.49951 * 359.97438 * 12 11 10 14 14 C 1.50699 * 120.33318 * 180.02562 * 13 12 11 15 15 O 1.42903 * 109.47152 * 300.00002 * 14 13 12 16 16 Si 1.86293 * 109.47431 * 179.97438 * 14 13 12 17 17 C 1.38058 * 119.33098 * 0.27176 * 13 12 11 18 18 N 1.31943 * 120.85521 * 359.41444 * 17 13 12 19 19 C 1.53774 * 87.17540 * 334.57133 * 7 6 4 20 20 H 0.97000 * 120.00285 * 180.02562 * 1 2 3 21 21 H 0.97004 * 119.99977 * 359.97438 * 1 2 3 22 22 H 1.09002 * 113.61231 * 25.48085 * 6 4 2 23 23 H 1.09003 * 113.69525 * 254.50325 * 6 4 2 24 24 H 0.96998 * 119.99876 * 285.85428 * 9 7 6 25 25 H 1.08002 * 120.44865 * 359.97438 * 11 10 9 26 26 H 1.07995 * 120.74866 * 179.97438 * 12 11 10 27 27 H 1.09008 * 109.47393 * 59.99397 * 14 13 12 28 28 H 0.96700 * 114.00311 * 180.02562 * 15 14 13 29 29 H 1.48506 * 109.99973 * 59.99460 * 16 14 13 30 30 H 1.48493 * 110.00375 * 181.31561 * 16 14 13 31 31 H 1.07996 * 119.57486 * 179.72701 * 17 13 12 32 32 H 1.08997 * 113.61613 * 140.02196 * 19 7 6 33 33 H 1.09002 * 113.61452 * 270.84639 * 19 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3477 0.0000 0.0000 3 8 1.9541 1.0503 0.0000 4 6 2.1012 -1.3051 -0.0006 5 1 1.7399 -2.0027 0.7550 6 6 2.2505 -1.9331 -1.3993 7 6 3.6826 -2.3126 -0.9869 8 1 4.4152 -2.1828 -1.7835 9 7 3.7781 -3.6206 -0.3339 10 6 4.3120 -4.7038 -1.0223 11 6 4.7533 -4.5392 -2.3310 12 6 5.2820 -5.6257 -3.0046 13 6 5.3522 -6.8447 -2.3436 14 6 5.9212 -8.0552 -3.0379 15 8 5.1467 -8.3437 -4.2037 16 14 5.8713 -9.5150 -1.8816 17 6 4.8909 -6.9379 -1.0458 18 7 4.3969 -5.8831 -0.4258 19 6 3.6295 -1.1341 -0.0006 20 1 -0.4850 -0.8400 0.0004 21 1 -0.4850 0.8401 0.0004 22 1 2.2079 -1.2067 -2.2109 23 1 1.6015 -2.7930 -1.5650 24 1 3.4688 -3.7307 0.5788 25 1 4.6833 -3.5763 -2.8152 26 1 5.6322 -5.5280 -4.0215 27 1 6.9532 -7.8565 -3.3274 28 1 5.4563 -9.1129 -4.7012 29 1 4.4699 -9.7964 -1.4789 30 1 6.4588 -10.7075 -2.5434 31 1 4.9395 -7.8852 -0.5295 32 1 4.0929 -1.3493 0.9622 33 1 3.9645 -0.1899 -0.4300 There are 45 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 45 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_27_12220718_13915762.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 15:08:38 Heat of formation + Delta-G solvation = 0.668664 kcal Electronic energy + Delta-G solvation = -17690.567283 eV Core-core repulsion = 14718.627264 eV Total energy + Delta-G solvation = -2971.940019 eV No. of doubly occupied orbitals = 45 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 250.110 amu Computer time = 0.46 seconds Orbital eigenvalues (eV) -41.71807 -41.01370 -39.05860 -37.86626 -35.21267 -34.59691 -33.39786 -31.25328 -27.57436 -26.76544 -25.95427 -24.78663 -22.81087 -21.92202 -20.24494 -19.16711 -18.53441 -18.14929 -17.84895 -17.72571 -16.65976 -16.44164 -15.93984 -15.73686 -15.52759 -15.18716 -15.00953 -14.62758 -14.04826 -13.94122 -13.79791 -13.67648 -13.37730 -12.81970 -12.38441 -12.02856 -11.88054 -11.57935 -11.13710 -10.88737 -10.72949 -10.68270 -10.57867 -10.29806 -8.69383 -4.90411 0.22991 0.41638 1.34151 1.56655 1.61308 1.97276 2.02739 2.61968 2.78955 3.37698 3.43137 3.46509 3.60747 3.73242 3.84141 3.90454 4.01464 4.12001 4.26200 4.38183 4.43863 4.57573 4.70833 4.76879 4.78265 4.91283 4.96848 5.03924 5.12327 5.34292 5.55537 5.85378 6.04451 6.43054 6.54394 6.64145 7.14390 7.31110 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.840 5.840 2 C 0.521 3.479 3 O -0.594 6.594 4 C -0.134 4.134 5 H 0.133 0.867 6 C -0.130 4.130 7 C 0.134 3.866 8 H 0.110 0.890 9 N -0.699 5.699 10 C 0.396 3.604 11 C -0.240 4.240 12 C -0.014 4.014 13 C -0.198 4.198 14 C -0.066 4.066 15 O -0.559 6.559 16 Si 0.751 3.249 17 C 0.145 3.855 18 N -0.561 5.561 19 C -0.122 4.122 20 H 0.417 0.583 21 H 0.404 0.596 22 H 0.097 0.903 23 H 0.087 0.913 24 H 0.409 0.591 25 H 0.153 0.847 26 H 0.146 0.854 27 H 0.096 0.904 28 H 0.394 0.606 29 H -0.300 1.300 30 H -0.283 1.283 31 H 0.166 0.834 32 H 0.083 0.917 33 H 0.098 0.902 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.087 -1.925 -0.558 2.006 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.403 5.403 2 C 0.307 3.693 3 O -0.475 6.475 4 C -0.155 4.155 5 H 0.151 0.849 6 C -0.169 4.169 7 C 0.028 3.972 8 H 0.128 0.872 9 N -0.331 5.331 10 C 0.161 3.839 11 C -0.265 4.265 12 C -0.040 4.040 13 C -0.203 4.203 14 C -0.176 4.176 15 O -0.369 6.369 16 Si 0.657 3.343 17 C -0.012 4.012 18 N -0.278 5.278 19 C -0.161 4.161 20 H 0.248 0.752 21 H 0.235 0.765 22 H 0.116 0.884 23 H 0.106 0.894 24 H 0.246 0.754 25 H 0.170 0.830 26 H 0.164 0.836 27 H 0.114 0.886 28 H 0.245 0.755 29 H -0.228 1.228 30 H -0.210 1.210 31 H 0.182 0.818 32 H 0.102 0.898 33 H 0.116 0.884 Dipole moment (debyes) X Y Z Total from point charges -0.295 -1.556 0.538 1.672 hybrid contribution -0.708 -0.272 -1.567 1.741 sum -1.002 -1.827 -1.029 2.325 Atomic orbital electron populations 1.43851 1.06646 1.13670 1.76118 1.20900 0.83292 0.91219 0.73866 1.90742 1.69397 1.35374 1.51981 1.22916 0.96653 0.94443 1.01505 0.84897 1.23452 0.97714 1.00913 0.94819 1.21832 0.97785 0.81227 0.96393 0.87182 1.44154 1.66651 1.05658 1.16620 1.18570 0.89407 0.86876 0.89059 1.21706 1.08143 1.01687 0.94948 1.21414 0.92054 0.90874 0.99615 1.20142 1.08009 0.95966 0.96162 1.24668 0.96927 1.02962 0.93006 1.86540 1.58309 1.52914 1.39168 0.94338 0.80834 0.74822 0.84320 1.22383 0.91249 0.96102 0.91487 1.67142 1.22408 0.99279 1.39010 1.23181 0.93597 0.98446 1.00867 0.75213 0.76495 0.88449 0.89426 0.75439 0.82984 0.83614 0.88631 0.75535 1.22774 1.21025 0.81781 0.89792 0.88383 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.84 4.39 8.87 -173.54 -1.54 2.85 16 2 C 0.52 0.68 7.63 87.66 0.67 1.35 16 3 O -0.59 -6.86 16.74 -3.04 -0.05 -6.91 16 4 C -0.13 0.60 4.04 -10.92 -0.04 0.55 16 5 H 0.13 -1.09 8.14 -2.39 -0.02 -1.11 16 6 C -0.13 0.74 7.45 31.21 0.23 0.97 16 7 C 0.13 -0.61 4.06 45.51 0.19 -0.43 16 8 H 0.11 -0.62 6.17 -2.39 -0.01 -0.64 16 9 N -0.70 1.31 5.44 -322.06 -1.75 -0.44 16 10 C 0.40 1.19 7.65 133.04 1.02 2.21 16 11 C -0.24 -0.27 9.28 22.50 0.21 -0.06 16 12 C -0.01 -0.03 9.77 22.44 0.22 0.19 16 13 C -0.20 -0.53 5.43 -19.76 -0.11 -0.64 16 14 C -0.07 0.06 2.83 71.24 0.20 0.26 16 15 O -0.56 -0.85 12.76 -148.98 -1.90 -2.75 16 16 Si 0.75 -1.35 29.82 68.60 2.05 0.70 16 17 C 0.14 0.57 9.84 84.63 0.83 1.40 16 18 N -0.56 -3.36 10.39 -193.27 -2.01 -5.37 16 19 C -0.12 0.35 7.14 31.12 0.22 0.57 16 20 H 0.42 -4.66 8.83 -92.71 -0.82 -5.48 16 21 H 0.40 -2.22 8.93 -92.71 -0.83 -3.05 16 22 H 0.10 -0.51 8.10 -2.39 -0.02 -0.53 16 23 H 0.09 -0.53 8.14 -2.39 -0.02 -0.55 16 24 H 0.41 -1.22 8.83 -92.71 -0.82 -2.03 16 25 H 0.15 -0.50 6.06 -2.91 -0.02 -0.52 16 26 H 0.15 -0.16 8.06 -2.91 -0.02 -0.19 16 27 H 0.10 -0.49 7.96 -2.38 -0.02 -0.51 16 28 H 0.39 -2.54 8.74 -74.06 -0.65 -3.18 16 29 H -0.30 -1.77 7.11 99.48 0.71 -1.07 16 30 H -0.28 -0.56 7.11 99.48 0.71 0.14 16 31 H 0.17 0.03 4.88 -2.91 -0.01 0.01 16 32 H 0.08 -0.27 8.14 -2.39 -0.02 -0.29 16 33 H 0.10 0.06 7.44 -2.39 -0.02 0.04 16 Total: 0.00 -21.03 281.78 -3.45 -24.48 By element: Atomic # 1 Polarization: -17.06 SS G_CDS: -1.88 Total: -18.94 kcal Atomic # 6 Polarization: 2.75 SS G_CDS: 3.64 Total: 6.39 kcal Atomic # 7 Polarization: 2.33 SS G_CDS: -5.30 Total: -2.97 kcal Atomic # 8 Polarization: -7.70 SS G_CDS: -1.95 Total: -9.66 kcal Atomic # 14 Polarization: -1.35 SS G_CDS: 2.05 Total: 0.70 kcal Total: -21.03 -3.45 -24.48 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_27_12220718_13915762.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 25.145 kcal (2) G-P(sol) polarization free energy of solvation -21.026 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 4.119 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.451 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.477 kcal (6) G-S(sol) free energy of system = (1) + (5) 0.669 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.46 seconds