Wall clock time and date at job start Thu Mar 4 2021 15:08:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.33332 * 125.94845 * 2 1 4 4 C 1.50698 * 122.71049 * 359.97438 * 3 2 1 5 5 O 1.42901 * 109.47004 * 30.00022 * 4 3 2 6 6 Si 1.86298 * 109.47327 * 149.99737 * 4 3 2 7 7 N 1.32122 * 114.57717 * 179.75306 * 3 2 1 8 8 C 1.29683 * 116.86660 * 0.46977 * 7 3 2 9 9 N 1.38606 * 124.94924 * 179.81324 * 8 7 3 10 10 C 1.46506 * 119.99884 * 179.72091 * 9 8 7 11 11 H 1.08993 * 112.85127 * 336.19897 * 10 9 8 12 12 C 1.53786 * 113.61017 * 107.50808 * 10 9 8 13 13 C 1.53780 * 87.08292 * 89.11397 * 12 10 9 14 14 H 1.08992 * 113.69153 * 270.87353 * 13 12 10 15 15 C 1.50696 * 113.61396 * 139.97857 * 13 12 10 16 16 N 1.34778 * 120.00287 * 82.50126 * 15 13 12 17 17 O 1.21286 * 119.99871 * 262.50502 * 15 13 12 18 18 C 1.53780 * 113.61267 * 205.00015 * 10 9 8 19 19 S 1.70974 * 110.10199 * 359.55370 * 8 7 3 20 20 H 1.09002 * 109.46908 * 180.02562 * 1 2 3 21 21 H 1.08996 * 109.47555 * 300.02362 * 1 2 3 22 22 H 1.09000 * 109.47244 * 60.02590 * 1 2 3 23 23 H 1.09002 * 109.47357 * 269.99991 * 4 3 2 24 24 H 0.96695 * 114.00408 * 59.99874 * 5 4 3 25 25 H 1.48509 * 109.99732 * 58.68194 * 6 4 3 26 26 H 1.48500 * 110.00238 * 179.97438 * 6 4 3 27 27 H 0.96995 * 120.00007 * 359.97438 * 9 8 7 28 28 H 1.09002 * 113.60822 * 203.66522 * 12 10 9 29 29 H 1.08998 * 113.61367 * 334.56303 * 12 10 9 30 30 H 0.97000 * 119.99259 * 0.02562 * 16 15 13 31 31 H 0.96998 * 120.00332 * 180.02562 * 16 15 13 32 32 H 1.09001 * 113.61558 * 25.44031 * 18 10 9 33 33 H 1.08997 * 113.61463 * 156.33765 * 18 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2897 1.0794 0.0000 4 6 1.7413 2.4830 -0.0006 5 8 0.4810 2.5022 0.6726 6 14 2.9318 3.6153 0.8778 7 7 3.5850 0.8189 0.0052 8 6 3.9315 -0.4308 0.0001 9 7 5.2385 -0.8924 0.0005 10 6 5.5066 -2.3327 0.0005 11 1 4.6805 -2.9170 0.4055 12 6 6.0366 -2.8606 -1.3432 13 6 7.4480 -2.5438 -0.8214 14 1 7.7805 -1.5303 -1.0455 15 6 8.4729 -3.5887 -1.1801 16 7 9.0591 -3.5691 -2.3936 17 8 8.7701 -4.4475 -0.3769 18 6 6.8746 -2.7046 0.5965 19 16 2.5413 -1.4260 0.0000 20 1 -0.3633 -1.0277 0.0005 21 1 -0.3634 0.5142 0.8897 22 1 -0.3634 0.5134 -0.8902 23 1 1.6095 2.8212 -1.0284 24 1 0.5228 2.2126 1.5942 25 1 4.2558 3.5799 0.2062 26 1 2.4027 5.0028 0.8836 27 1 5.9755 -0.2619 0.0045 28 1 5.8561 -3.9246 -1.4959 29 1 5.7406 -2.2530 -2.1983 30 1 8.8216 -2.8820 -3.0358 31 1 9.7185 -4.2419 -2.6246 32 1 7.2552 -1.9710 1.3072 33 1 6.9233 -3.7259 0.9739 There are 46 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 46 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_27_12220718_15704122.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 15:08:42 Heat of formation + Delta-G solvation = 4.101426 kcal Electronic energy + Delta-G solvation = -18285.604121 eV Core-core repulsion = 15247.427585 eV Total energy + Delta-G solvation = -3038.176536 eV No. of doubly occupied orbitals = 46 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 270.082 amu Computer time = 0.46 seconds Orbital eigenvalues (eV) -41.56992 -40.96198 -39.19131 -37.68724 -35.13277 -34.59380 -32.43523 -29.36319 -27.24846 -26.82323 -25.56541 -24.35421 -22.53200 -20.80213 -20.46224 -18.94635 -18.50023 -17.87348 -17.80658 -17.17922 -16.62202 -16.58949 -15.89342 -15.69686 -15.59063 -15.26283 -14.65045 -14.31396 -14.13317 -13.79014 -13.59601 -13.42075 -13.40334 -12.92307 -12.69928 -12.40434 -12.04728 -11.78877 -11.70752 -11.05598 -10.88863 -10.69920 -10.61890 -10.37769 -10.00278 -8.64436 -4.94704 -0.01729 0.16357 0.75199 1.31273 1.55038 1.73435 1.83487 1.85348 2.12244 2.59601 3.28936 3.35011 3.39152 3.55305 3.62685 3.85075 4.16892 4.23348 4.33625 4.36123 4.51180 4.62854 4.69809 4.83262 4.87339 4.89834 4.91229 5.02502 5.14669 5.35780 5.66032 5.84615 6.29125 6.42086 6.67978 6.94267 7.29954 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 C -0.245 4.245 3 C 0.051 3.949 4 C -0.029 4.029 5 O -0.540 6.540 6 Si 0.790 3.210 7 N -0.569 5.569 8 C 0.310 3.690 9 N -0.670 5.670 10 C 0.129 3.871 11 H 0.104 0.896 12 C -0.128 4.128 13 C -0.134 4.134 14 H 0.136 0.864 15 C 0.522 3.478 16 N -0.840 5.840 17 O -0.593 6.593 18 C -0.119 4.119 19 S 0.124 5.876 20 H 0.064 0.936 21 H 0.095 0.905 22 H 0.068 0.932 23 H 0.113 0.887 24 H 0.395 0.605 25 H -0.300 1.300 26 H -0.295 1.295 27 H 0.416 0.584 28 H 0.101 0.899 29 H 0.091 0.909 30 H 0.417 0.583 31 H 0.405 0.595 32 H 0.089 0.911 33 H 0.102 0.898 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.509 -1.132 -0.918 1.544 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.368 4.368 3 C -0.079 4.079 4 C -0.143 4.143 5 O -0.347 6.347 6 Si 0.696 3.304 7 N -0.297 5.297 8 C -0.061 4.061 9 N -0.310 5.310 10 C 0.023 3.977 11 H 0.122 0.878 12 C -0.168 4.168 13 C -0.155 4.155 14 H 0.153 0.847 15 C 0.308 3.692 16 N -0.403 5.403 17 O -0.474 6.474 18 C -0.157 4.157 19 S 0.373 5.627 20 H 0.083 0.917 21 H 0.114 0.886 22 H 0.087 0.913 23 H 0.130 0.870 24 H 0.245 0.755 25 H -0.227 1.227 26 H -0.223 1.223 27 H 0.255 0.745 28 H 0.119 0.881 29 H 0.110 0.890 30 H 0.248 0.752 31 H 0.235 0.765 32 H 0.107 0.893 33 H 0.120 0.880 Dipole moment (debyes) X Y Z Total from point charges 0.138 -1.560 -0.925 1.819 hybrid contribution 0.451 0.815 -1.187 1.509 sum 0.589 -0.745 -2.112 2.316 Atomic orbital electron populations 1.20194 0.85397 1.02200 1.03993 1.25422 1.02147 0.92993 1.16219 1.20210 0.86731 0.97663 1.03263 1.24428 0.92656 0.95257 1.01925 1.86492 1.28182 1.89640 1.30389 0.93200 0.74049 0.74144 0.88992 1.65954 1.17905 1.17610 1.28224 1.23447 0.92575 0.91519 0.98526 1.43634 1.01336 1.06524 1.79509 1.21940 0.98826 0.79296 0.97633 0.87794 1.23417 0.92187 1.03070 0.98134 1.22874 0.93862 0.99508 0.99272 0.84655 1.20851 0.81387 0.85341 0.81659 1.43849 1.44880 1.35281 1.16254 1.90751 1.65108 1.40456 1.51051 1.23186 0.92964 1.04074 0.95507 1.83901 0.95631 1.09631 1.73545 0.91675 0.88643 0.91345 0.87009 0.75507 1.22711 1.22308 0.74461 0.88056 0.89012 0.75196 0.76453 0.89288 0.88011 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 0.09 8.91 71.24 0.63 0.73 16 2 C -0.24 -0.44 6.50 24.58 0.16 -0.28 16 3 C 0.05 0.19 5.92 41.40 0.25 0.44 16 4 C -0.03 -0.06 2.94 71.24 0.21 0.15 16 5 O -0.54 0.46 10.17 -148.98 -1.52 -1.06 16 6 Si 0.79 1.90 32.08 68.60 2.20 4.11 16 7 N -0.57 -3.12 8.94 -189.86 -1.70 -4.82 16 8 C 0.31 0.58 8.24 179.32 1.48 2.06 16 9 N -0.67 2.02 5.42 -327.88 -1.78 0.24 16 10 C 0.13 -0.71 4.31 45.52 0.20 -0.51 16 11 H 0.10 -0.57 7.06 -2.39 -0.02 -0.58 16 12 C -0.13 0.90 7.43 31.12 0.23 1.13 16 13 C -0.13 0.79 4.03 -11.01 -0.04 0.74 16 14 H 0.14 -1.34 8.14 -2.39 -0.02 -1.36 16 15 C 0.52 0.03 7.63 87.66 0.67 0.70 16 16 N -0.84 5.29 8.87 -173.53 -1.54 3.75 16 17 O -0.59 -6.14 16.74 -3.05 -0.05 -6.19 16 18 C -0.12 0.51 7.15 31.12 0.22 0.73 16 19 S 0.12 0.00 21.69 -56.49 -1.23 -1.23 16 20 H 0.06 -0.19 8.14 -2.39 -0.02 -0.21 16 21 H 0.10 -0.40 6.39 -2.39 -0.02 -0.42 16 22 H 0.07 0.00 8.14 -2.39 -0.02 -0.02 16 23 H 0.11 0.36 7.96 -2.39 -0.02 0.34 16 24 H 0.39 -3.24 8.13 -74.06 -0.60 -3.85 16 25 H -0.30 -3.07 7.11 99.48 0.71 -2.37 16 26 H -0.30 -2.26 7.11 99.48 0.71 -1.56 16 27 H 0.42 -1.84 8.83 -92.71 -0.82 -2.66 16 28 H 0.10 -0.65 8.09 -2.39 -0.02 -0.67 16 29 H 0.09 -0.71 8.14 -2.39 -0.02 -0.73 16 30 H 0.42 -5.12 8.83 -92.71 -0.82 -5.94 16 31 H 0.40 -2.60 8.93 -92.71 -0.83 -3.43 16 32 H 0.09 -0.44 8.14 -2.39 -0.02 -0.46 16 33 H 0.10 -0.09 7.43 -2.39 -0.02 -0.10 16 Total: 0.00 -19.87 293.54 -3.44 -23.31 By element: Atomic # 1 Polarization: -22.17 SS G_CDS: -1.84 Total: -24.01 kcal Atomic # 6 Polarization: 1.88 SS G_CDS: 4.00 Total: 5.88 kcal Atomic # 7 Polarization: 4.19 SS G_CDS: -5.01 Total: -0.82 kcal Atomic # 8 Polarization: -5.68 SS G_CDS: -1.57 Total: -7.24 kcal Atomic # 14 Polarization: 1.90 SS G_CDS: 2.20 Total: 4.11 kcal Atomic # 16 Polarization: 0.00 SS G_CDS: -1.23 Total: -1.23 kcal Total: -19.87 -3.44 -23.31 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_27_12220718_15704122.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 27.412 kcal (2) G-P(sol) polarization free energy of solvation -19.868 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 7.544 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.443 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.310 kcal (6) G-S(sol) free energy of system = (1) + (5) 4.101 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.46 seconds