Wall clock time and date at job start Thu Mar 4 2021 12:27:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53005 * 1 3 3 C 1.53000 * 109.47158 * 2 1 4 4 C 1.53003 * 109.47632 * 239.99728 * 2 1 3 5 5 O 1.45205 * 109.46697 * 119.99900 * 2 1 3 6 6 C 1.34635 * 116.99983 * 60.00152 * 5 2 1 7 7 O 1.21510 * 120.00172 * 0.02562 * 6 5 2 8 8 N 1.34783 * 119.99907 * 179.97438 * 6 5 2 9 9 C 1.46500 * 119.99960 * 179.97438 * 8 6 5 10 10 C 1.52995 * 109.46917 * 180.02562 * 9 8 6 11 11 F 1.39895 * 112.85014 * 48.80615 * 10 9 8 12 12 C 1.53786 * 113.61162 * 179.97438 * 10 9 8 13 13 C 1.53781 * 87.07827 * 140.06748 * 12 10 9 14 14 H 1.09001 * 113.61418 * 219.93731 * 13 12 10 15 15 N 1.46499 * 113.61562 * 89.11795 * 13 12 10 16 16 C 1.38405 * 119.99936 * 156.52741 * 15 13 12 17 17 N 1.32494 * 119.22088 * 359.73198 * 16 15 13 18 18 C 1.32272 * 120.74414 * 179.75955 * 17 16 15 19 19 C 1.38606 * 119.19379 * 0.50690 * 18 17 16 20 20 C 1.50706 * 120.71767 * 179.72843 * 19 18 17 21 21 O 1.42895 * 109.47144 * 245.01530 * 20 19 18 22 22 Si 1.86292 * 109.47428 * 5.01889 * 20 19 18 23 23 C 1.38603 * 118.56259 * 359.74450 * 19 18 17 24 24 N 1.32283 * 119.19111 * 0.02562 * 23 19 18 25 25 C 1.53783 * 87.17424 * 334.52344 * 13 12 10 26 26 H 1.08997 * 109.46915 * 300.00003 * 1 2 3 27 27 H 1.09004 * 109.46599 * 60.00167 * 1 2 3 28 28 H 1.08999 * 109.46690 * 179.97438 * 1 2 3 29 29 H 1.09003 * 109.46975 * 179.97438 * 3 2 1 30 30 H 1.08988 * 109.47116 * 299.99821 * 3 2 1 31 31 H 1.09007 * 109.46687 * 60.00124 * 3 2 1 32 32 H 1.09004 * 109.46685 * 300.00528 * 4 2 1 33 33 H 1.08997 * 109.46620 * 59.99869 * 4 2 1 34 34 H 1.08996 * 109.47431 * 180.02562 * 4 2 1 35 35 H 0.97000 * 119.99829 * 0.02562 * 8 6 5 36 36 H 1.09002 * 109.47009 * 60.00471 * 9 8 6 37 37 H 1.08999 * 109.46934 * 300.00811 * 9 8 6 38 38 H 1.09000 * 113.61315 * 25.52058 * 12 10 9 39 39 H 1.08994 * 113.61303 * 254.61439 * 12 10 9 40 40 H 0.96999 * 119.99984 * 336.52584 * 15 13 12 41 41 H 1.07997 * 120.40668 * 180.22914 * 18 17 16 42 42 H 1.09008 * 109.47122 * 125.01765 * 20 19 18 43 43 H 0.96696 * 114.00669 * 180.02562 * 21 20 19 44 44 H 1.48497 * 110.00113 * 178.68068 * 22 20 19 45 45 H 1.48503 * 109.99729 * 299.99999 * 22 20 19 46 46 H 1.08000 * 120.40412 * 180.02562 * 23 19 18 47 47 H 1.09008 * 113.61277 * 140.02039 * 25 13 12 48 48 H 1.08992 * 113.61683 * 270.92887 * 25 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4425 0.0000 4 6 2.0402 -0.7213 -1.2492 5 8 2.0140 -0.6845 1.1856 6 6 1.6522 -1.9723 1.3384 7 8 0.9516 -2.5097 0.5036 8 7 2.0679 -2.6657 2.4168 9 6 1.6738 -4.0668 2.5833 10 6 2.2739 -4.6148 3.8796 11 9 2.0551 -3.7751 4.9770 12 6 1.9175 -6.0862 4.1496 13 6 3.3637 -6.2643 4.6414 14 1 3.8167 -7.2066 4.3333 15 7 3.5355 -5.9909 6.0703 16 6 4.5987 -6.5488 6.7587 17 7 5.4488 -7.3322 6.1113 18 6 6.4780 -7.8773 6.7384 19 6 6.6547 -7.6286 8.0904 20 6 7.8119 -8.2369 8.8402 21 8 7.3164 -9.1478 9.8234 22 14 8.9138 -9.1498 7.6473 23 6 5.7440 -6.8087 8.7381 24 7 4.7390 -6.2915 8.0508 25 6 3.7365 -5.0772 3.7377 26 1 -0.3633 0.5138 0.8900 27 1 -0.3633 0.5138 -0.8901 28 1 -0.3633 -1.0277 -0.0005 29 1 3.1301 1.4425 0.0005 30 1 1.6768 1.9563 -0.8899 31 1 1.6767 1.9563 0.8901 32 1 1.6768 -1.7490 -1.2491 33 1 1.6768 -0.2075 -2.1391 34 1 3.1301 -0.7217 -1.2489 35 1 2.6275 -2.2368 3.0830 36 1 2.0396 -4.6501 1.7382 37 1 0.5869 -4.1356 2.6289 38 1 1.6904 -6.6532 3.2468 39 1 1.1708 -6.2180 4.9326 40 1 2.9041 -5.4188 6.5340 41 1 7.1696 -8.5120 6.2044 42 1 8.3822 -7.4479 9.3305 43 1 8.0077 -9.5774 10.3455 44 1 10.0757 -9.7274 8.3694 45 1 8.1481 -10.2283 6.9721 46 1 5.8535 -6.5948 9.7910 47 1 4.4573 -4.3948 4.1885 48 1 4.0057 -5.3687 2.7226 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_27_15734492_12175864.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 12:27:51 Heat of formation + Delta-G solvation = -64.930254 kcal Electronic energy + Delta-G solvation = -31497.945132 eV Core-core repulsion = 26891.910357 eV Total energy + Delta-G solvation = -4606.034775 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 355.174 amu Computer time = 1.23 seconds Orbital eigenvalues (eV) -48.91975 -42.11740 -41.83427 -39.94254 -38.48288 -37.99656 -36.21899 -35.35190 -34.79192 -34.63565 -32.20014 -29.16875 -28.37901 -28.31683 -27.07592 -26.56255 -25.93840 -24.15286 -23.12981 -22.77823 -21.32962 -20.66572 -19.64096 -19.29658 -18.66755 -18.34669 -17.83563 -17.43509 -17.02106 -16.98071 -16.56101 -16.47927 -16.19112 -16.01626 -15.75796 -15.65984 -15.45869 -15.31579 -15.10202 -14.71007 -14.56136 -14.43542 -13.95900 -13.85868 -13.65572 -13.38689 -13.35664 -13.12902 -13.00516 -12.93184 -12.88685 -12.80193 -12.49764 -12.37224 -12.27469 -11.91829 -11.86452 -11.65133 -11.42201 -11.33771 -11.23923 -11.13731 -10.64593 -10.33519 -10.04472 -9.14895 -4.90900 0.02071 0.11644 1.07831 1.31378 1.61537 1.69364 1.72915 1.97016 2.71104 2.92440 3.01370 3.11002 3.18343 3.25880 3.40408 3.55891 3.63992 3.64756 3.72469 3.77137 3.78255 3.90248 3.92822 4.16000 4.32750 4.38004 4.51343 4.56286 4.57677 4.60354 4.64394 4.69044 4.72623 4.75270 4.77136 4.83145 4.85035 4.86156 4.90043 4.97292 5.07293 5.18317 5.25892 5.29490 5.32099 5.52603 5.75504 5.99471 6.26065 6.33802 6.63546 7.22614 7.24823 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.126 3.874 3 C -0.138 4.138 4 C -0.179 4.179 5 O -0.371 6.371 6 C 0.646 3.354 7 O -0.590 6.590 8 N -0.703 5.703 9 C 0.132 3.868 10 C 0.079 3.921 11 F -0.197 7.197 12 C -0.144 4.144 13 C 0.133 3.867 14 H 0.118 0.882 15 N -0.678 5.678 16 C 0.554 3.446 17 N -0.570 5.570 18 C 0.192 3.808 19 C -0.247 4.247 20 C -0.061 4.061 21 O -0.560 6.560 22 Si 0.756 3.244 23 C 0.212 3.788 24 N -0.591 5.591 25 C -0.157 4.157 26 H 0.059 0.941 27 H 0.088 0.912 28 H 0.064 0.936 29 H 0.069 0.931 30 H 0.100 0.900 31 H 0.067 0.933 32 H 0.065 0.935 33 H 0.087 0.913 34 H 0.062 0.938 35 H 0.414 0.586 36 H 0.107 0.893 37 H 0.078 0.922 38 H 0.147 0.853 39 H 0.090 0.910 40 H 0.416 0.584 41 H 0.186 0.814 42 H 0.102 0.898 43 H 0.397 0.603 44 H -0.283 1.283 45 H -0.294 1.294 46 H 0.184 0.816 47 H 0.075 0.925 48 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.687 0.574 -1.271 4.890 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.238 4.238 2 C 0.090 3.910 3 C -0.195 4.195 4 C -0.236 4.236 5 O -0.286 6.286 6 C 0.400 3.600 7 O -0.481 6.481 8 N -0.363 5.363 9 C 0.009 3.991 10 C 0.061 3.939 11 F -0.177 7.177 12 C -0.183 4.183 13 C 0.027 3.973 14 H 0.136 0.864 15 N -0.314 5.314 16 C 0.198 3.802 17 N -0.293 5.293 18 C 0.025 3.975 19 C -0.254 4.254 20 C -0.171 4.171 21 O -0.370 6.370 22 Si 0.661 3.339 23 C 0.045 3.955 24 N -0.314 5.314 25 C -0.196 4.196 26 H 0.078 0.922 27 H 0.107 0.893 28 H 0.083 0.917 29 H 0.089 0.911 30 H 0.118 0.882 31 H 0.086 0.914 32 H 0.084 0.916 33 H 0.106 0.894 34 H 0.082 0.918 35 H 0.250 0.750 36 H 0.125 0.875 37 H 0.097 0.903 38 H 0.165 0.835 39 H 0.109 0.891 40 H 0.255 0.745 41 H 0.203 0.797 42 H 0.120 0.880 43 H 0.248 0.752 44 H -0.209 1.209 45 H -0.222 1.222 46 H 0.201 0.799 47 H 0.093 0.907 48 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges 3.289 0.213 -2.865 4.367 hybrid contribution 0.378 -0.389 2.395 2.456 sum 3.667 -0.176 -0.470 3.701 Atomic orbital electron populations 1.22481 0.94043 1.03751 1.03490 1.22388 0.94477 0.92594 0.81534 1.21898 1.02487 0.90938 1.04215 1.22469 1.01692 1.02311 0.97158 1.86319 1.71539 1.23265 1.47428 1.18237 0.78676 0.80825 0.82287 1.90912 1.42050 1.70955 1.44137 1.44551 1.55488 1.12743 1.23470 1.21886 1.00980 0.79432 0.96759 1.22376 0.98933 0.90040 0.82600 1.92853 1.95739 1.73296 1.55833 1.24020 0.96768 0.92567 1.04946 1.21895 0.97000 0.99934 0.78517 0.86398 1.43960 1.26245 1.52143 1.09031 1.19572 0.87704 0.87377 0.85593 1.67949 1.06601 1.14695 1.40031 1.23172 0.91556 0.91539 0.91202 1.20830 1.02600 1.05724 0.96285 1.24609 0.98226 0.97050 0.97234 1.86542 1.38534 1.60841 1.51132 0.94341 0.75640 0.82371 0.81515 1.23165 0.85368 0.86794 1.00221 1.67980 1.25958 1.29800 1.07621 1.24247 0.94125 0.98066 1.03161 0.92154 0.89332 0.91668 0.91148 0.88184 0.91379 0.91566 0.89409 0.91848 0.74997 0.87510 0.90343 0.83494 0.89103 0.74545 0.79734 0.87984 0.75216 1.20914 1.22153 0.79919 0.90669 0.84807 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.62 8.37 71.98 0.60 -0.01 16 2 C 0.13 0.39 1.13 -10.79 -0.01 0.38 16 3 C -0.14 0.24 8.85 71.98 0.64 0.87 16 4 C -0.18 -0.48 8.37 71.98 0.60 0.12 16 5 O -0.37 -2.25 9.94 -55.44 -0.55 -2.80 16 6 C 0.65 4.31 8.06 129.79 1.05 5.36 16 7 O -0.59 -6.50 11.88 19.81 0.24 -6.26 16 8 N -0.70 -0.72 5.47 -590.85 -3.23 -3.95 16 9 C 0.13 -0.37 5.37 86.38 0.46 0.09 16 10 C 0.08 -0.35 1.66 -10.18 -0.02 -0.36 16 11 F -0.20 -0.18 15.74 44.97 0.71 0.53 16 12 C -0.14 1.00 7.28 31.12 0.23 1.23 16 13 C 0.13 -0.42 4.30 45.52 0.20 -0.23 16 14 H 0.12 -0.30 7.40 -2.39 -0.02 -0.32 16 15 N -0.68 -1.35 5.32 -327.93 -1.75 -3.10 16 16 C 0.55 3.47 8.43 261.49 2.20 5.67 16 17 N -0.57 -2.84 9.15 -197.99 -1.81 -4.65 16 18 C 0.19 0.35 9.92 84.71 0.84 1.19 16 19 C -0.25 -0.33 5.40 -19.69 -0.11 -0.44 16 20 C -0.06 0.20 2.82 71.24 0.20 0.41 16 21 O -0.56 0.22 12.82 -148.98 -1.91 -1.69 16 22 Si 0.76 -3.53 29.92 68.60 2.05 -1.47 16 23 C 0.21 0.78 10.99 84.71 0.93 1.71 16 24 N -0.59 -4.41 10.46 -197.99 -2.07 -6.48 16 25 C -0.16 0.82 7.35 31.21 0.23 1.05 16 26 H 0.06 0.19 8.14 -2.39 -0.02 0.17 16 27 H 0.09 -0.02 8.14 -2.38 -0.02 -0.04 16 28 H 0.06 0.55 5.88 -2.39 -0.01 0.53 16 29 H 0.07 -0.14 8.14 -2.39 -0.02 -0.16 16 30 H 0.10 -0.52 8.14 -2.39 -0.02 -0.54 16 31 H 0.07 -0.10 8.14 -2.38 -0.02 -0.12 16 32 H 0.07 0.50 5.88 -2.39 -0.01 0.48 16 33 H 0.09 -0.07 8.14 -2.39 -0.02 -0.09 16 34 H 0.06 0.12 8.14 -2.39 -0.02 0.10 16 35 H 0.41 -0.35 8.30 -92.71 -0.77 -1.11 16 36 H 0.11 -0.54 7.95 -2.39 -0.02 -0.56 16 37 H 0.08 -0.10 8.14 -2.39 -0.02 -0.12 16 38 H 0.15 -1.74 8.10 -2.39 -0.02 -1.76 16 39 H 0.09 -0.51 8.14 -2.39 -0.02 -0.53 16 40 H 0.42 0.92 7.92 -92.71 -0.73 0.19 16 41 H 0.19 -0.61 5.04 -2.91 -0.01 -0.63 16 42 H 0.10 -0.81 7.96 -2.38 -0.02 -0.83 16 43 H 0.40 -3.32 8.74 -74.06 -0.65 -3.97 16 44 H -0.28 0.11 7.11 99.48 0.71 0.81 16 45 H -0.29 -0.68 7.06 99.48 0.70 0.02 16 46 H 0.18 -0.13 8.06 -2.91 -0.02 -0.15 16 47 H 0.07 -0.14 8.14 -2.38 -0.02 -0.16 16 48 H 0.13 -1.21 7.97 -2.39 -0.02 -1.23 16 Total: 0.00 -21.49 393.80 -1.38 -22.87 By element: Atomic # 1 Polarization: -8.92 SS G_CDS: -1.10 Total: -10.01 kcal Atomic # 6 Polarization: 8.99 SS G_CDS: 8.04 Total: 17.03 kcal Atomic # 7 Polarization: -9.33 SS G_CDS: -8.86 Total: -18.19 kcal Atomic # 8 Polarization: -8.53 SS G_CDS: -2.23 Total: -10.76 kcal Atomic # 9 Polarization: -0.18 SS G_CDS: 0.71 Total: 0.53 kcal Atomic # 14 Polarization: -3.53 SS G_CDS: 2.05 Total: -1.47 kcal Total: -21.49 -1.38 -22.87 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_27_15734492_12175864.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -42.065 kcal (2) G-P(sol) polarization free energy of solvation -21.488 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -63.553 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.378 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.865 kcal (6) G-S(sol) free energy of system = (1) + (5) -64.930 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.23 seconds