Wall clock time and date at job start Thu Mar 4 2021 12:28:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53005 * 1 3 3 C 1.52992 * 109.47303 * 2 1 4 4 C 1.53008 * 109.46652 * 240.00101 * 2 1 3 5 5 O 1.45196 * 109.47110 * 120.00569 * 2 1 3 6 6 C 1.34641 * 117.00167 * 59.99652 * 5 2 1 7 7 O 1.21511 * 119.99865 * 0.02562 * 6 5 2 8 8 N 1.34780 * 120.00020 * 179.97438 * 6 5 2 9 9 C 1.46503 * 119.99703 * 180.02562 * 8 6 5 10 10 C 1.53003 * 109.46622 * 180.02562 * 9 8 6 11 11 F 1.39897 * 112.84868 * 316.19253 * 10 9 8 12 12 C 1.53779 * 113.69268 * 87.46383 * 10 9 8 13 13 C 1.53784 * 87.08045 * 139.99100 * 12 10 9 14 14 H 1.09004 * 113.61451 * 220.02152 * 13 12 10 15 15 N 1.46496 * 113.61524 * 89.11591 * 13 12 10 16 16 C 1.39150 * 119.99781 * 107.50321 * 15 13 12 17 17 N 1.32333 * 119.71543 * 359.72931 * 16 15 13 18 18 C 1.32013 * 121.64097 * 179.71335 * 17 16 15 19 19 C 1.37987 * 120.89949 * 0.56126 * 18 17 16 20 20 C 1.50699 * 120.32259 * 179.70266 * 19 18 17 21 21 O 1.42899 * 109.47110 * 120.02491 * 20 19 18 22 22 Si 1.86296 * 109.47620 * 0.02562 * 20 19 18 23 23 C 1.38899 * 119.34917 * 359.72573 * 19 18 17 24 24 C 1.38447 * 118.48471 * 0.02562 * 23 19 18 25 25 F 1.35104 * 120.47197 * 180.02562 * 24 23 19 26 26 C 1.53779 * 113.61005 * 185.00145 * 10 9 8 27 27 H 1.09001 * 109.46876 * 299.99623 * 1 2 3 28 28 H 1.08993 * 109.46875 * 59.99689 * 1 2 3 29 29 H 1.09007 * 109.47085 * 179.97438 * 1 2 3 30 30 H 1.09003 * 109.47403 * 180.02562 * 3 2 1 31 31 H 1.09003 * 109.47341 * 300.00538 * 3 2 1 32 32 H 1.09001 * 109.46846 * 60.00359 * 3 2 1 33 33 H 1.08998 * 109.47557 * 300.00285 * 4 2 1 34 34 H 1.09001 * 109.46999 * 60.00661 * 4 2 1 35 35 H 1.09003 * 109.46728 * 179.97438 * 4 2 1 36 36 H 0.96996 * 119.99832 * 0.02562 * 8 6 5 37 37 H 1.08996 * 109.47333 * 60.00428 * 9 8 6 38 38 H 1.08996 * 109.46828 * 299.99959 * 9 8 6 39 39 H 1.09002 * 113.61557 * 25.44212 * 12 10 9 40 40 H 1.09004 * 113.61501 * 254.53633 * 12 10 9 41 41 H 0.96998 * 120.00377 * 287.50245 * 15 13 12 42 42 H 1.07999 * 119.54693 * 180.28773 * 18 17 16 43 43 H 1.09002 * 109.47148 * 240.01784 * 20 19 18 44 44 H 0.96699 * 114.00273 * 179.97438 * 21 20 19 45 45 H 1.48502 * 109.99864 * 298.68448 * 22 20 19 46 46 H 1.48511 * 109.99610 * 59.99828 * 22 20 19 47 47 H 1.08006 * 120.75910 * 180.02562 * 23 19 18 48 48 H 1.08997 * 113.61646 * 105.38661 * 26 10 9 49 49 H 1.08998 * 113.69354 * 334.48969 * 26 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4424 0.0000 4 6 2.0400 -0.7213 -1.2493 5 8 2.0140 -0.6846 1.1855 6 6 1.6522 -1.9724 1.3382 7 8 0.9516 -2.5097 0.5034 8 7 2.0681 -2.6659 2.4165 9 6 1.6748 -4.0674 2.5823 10 6 2.2748 -4.6154 3.8787 11 9 3.6106 -4.2411 4.0598 12 6 1.3947 -4.3758 5.1167 13 6 1.7855 -5.7920 5.5714 14 1 0.9617 -6.3511 6.0150 15 7 3.0044 -5.8322 6.3830 16 6 2.9223 -6.0793 7.7499 17 7 1.7397 -6.2718 8.3117 18 6 1.6181 -6.5145 9.6037 19 6 2.7274 -6.5653 10.4227 20 6 2.5730 -6.8368 11.8969 21 8 3.2883 -8.0253 12.2399 22 14 0.7682 -7.0596 12.3017 23 6 3.9878 -6.3633 9.8750 24 6 4.0854 -6.1158 8.5163 25 9 5.2913 -5.9141 7.9415 26 6 2.0225 -6.1180 4.0872 27 1 -0.3633 0.5138 0.8900 28 1 -0.3633 0.5139 -0.8899 29 1 -0.3633 -1.0277 -0.0005 30 1 3.1301 1.4424 -0.0005 31 1 1.6767 1.9563 -0.8899 32 1 1.6768 1.9562 0.8900 33 1 1.6766 -1.7489 -1.2494 34 1 1.6767 -0.2073 -2.1393 35 1 3.1300 -0.7209 -1.2496 36 1 2.6277 -2.2371 3.0826 37 1 2.0412 -4.6501 1.7372 38 1 0.5880 -4.1368 2.6276 39 1 0.3350 -4.2685 4.8849 40 1 1.7676 -3.5884 5.7718 41 1 3.8688 -5.6867 5.9675 42 1 0.6365 -6.6711 10.0260 43 1 2.9717 -5.9962 12.4649 44 1 3.2331 -8.2613 13.1760 45 1 0.0185 -5.8190 11.9792 46 1 0.2129 -8.2029 11.5336 47 1 4.8716 -6.3984 10.4949 48 1 2.9022 -6.7370 3.9113 49 1 1.1349 -6.4883 3.5744 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_27_15734492_17656566.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 12:28:06 Heat of formation + Delta-G solvation = -126.272925 kcal Electronic energy + Delta-G solvation = -34075.120352 eV Core-core repulsion = 29062.397494 eV Total energy + Delta-G solvation = -5012.722858 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 372.169 amu Computer time = 1.69 seconds Orbital eigenvalues (eV) -50.08525 -49.01208 -41.88244 -41.59076 -39.96227 -38.52450 -37.80798 -36.24768 -35.39335 -34.72894 -33.37386 -31.51075 -29.17144 -28.41131 -28.34938 -27.14565 -26.49302 -25.48119 -23.96275 -22.96989 -22.81130 -21.38634 -20.70049 -19.67081 -19.35301 -18.60635 -18.27010 -18.08608 -17.88698 -17.48523 -17.11003 -17.06194 -17.01968 -16.49798 -16.37866 -16.14904 -15.75900 -15.52222 -15.49762 -15.15433 -15.10400 -15.05150 -14.68114 -14.48759 -14.43270 -14.19449 -13.97133 -13.77639 -13.65639 -13.41122 -13.17013 -13.08856 -12.96845 -12.92351 -12.90731 -12.56074 -12.52095 -12.40688 -12.09562 -11.84403 -11.46171 -11.42061 -11.32282 -11.18937 -10.93653 -10.85617 -10.38657 -10.25307 -8.92588 -4.91245 -0.28054 -0.03664 1.03158 1.31904 1.64485 1.69299 1.76421 1.98990 2.34203 2.85987 2.87411 2.94661 3.03348 3.11096 3.18338 3.31528 3.55551 3.56771 3.59667 3.69098 3.72738 3.74576 3.89470 4.03166 4.26613 4.28481 4.32159 4.36417 4.45714 4.52238 4.56239 4.57172 4.58368 4.62921 4.70136 4.72029 4.75750 4.80684 4.82053 4.82930 4.85891 4.91547 5.02832 5.14635 5.22591 5.27209 5.28362 5.48365 5.83163 6.00682 6.20762 6.75491 6.94083 7.19862 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.179 4.179 2 C 0.126 3.874 3 C -0.138 4.138 4 C -0.180 4.180 5 O -0.371 6.371 6 C 0.647 3.353 7 O -0.589 6.589 8 N -0.704 5.704 9 C 0.132 3.868 10 C 0.081 3.919 11 F -0.196 7.196 12 C -0.160 4.160 13 C 0.128 3.872 14 H 0.115 0.885 15 N -0.698 5.698 16 C 0.381 3.619 17 N -0.522 5.522 18 C 0.128 3.872 19 C -0.169 4.169 20 C -0.066 4.066 21 O -0.566 6.566 22 Si 0.773 3.227 23 C -0.037 4.037 24 C -0.031 4.031 25 F -0.136 7.136 26 C -0.145 4.145 27 H 0.062 0.938 28 H 0.088 0.912 29 H 0.065 0.935 30 H 0.068 0.932 31 H 0.100 0.900 32 H 0.069 0.931 33 H 0.064 0.936 34 H 0.089 0.911 35 H 0.060 0.940 36 H 0.414 0.586 37 H 0.081 0.919 38 H 0.105 0.895 39 H 0.132 0.868 40 H 0.073 0.927 41 H 0.416 0.584 42 H 0.160 0.840 43 H 0.100 0.900 44 H 0.405 0.595 45 H -0.281 1.281 46 H -0.293 1.293 47 H 0.165 0.835 48 H 0.091 0.909 49 H 0.146 0.854 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.809 0.572 5.342 5.669 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.236 4.236 2 C 0.090 3.910 3 C -0.195 4.195 4 C -0.237 4.237 5 O -0.286 6.286 6 C 0.400 3.600 7 O -0.480 6.480 8 N -0.364 5.364 9 C 0.010 3.990 10 C 0.062 3.938 11 F -0.177 7.177 12 C -0.199 4.199 13 C 0.022 3.978 14 H 0.133 0.867 15 N -0.331 5.331 16 C 0.143 3.857 17 N -0.240 5.240 18 C -0.028 4.028 19 C -0.174 4.174 20 C -0.177 4.177 21 O -0.376 6.376 22 Si 0.678 3.322 23 C -0.063 4.063 24 C -0.058 4.058 25 F -0.115 7.115 26 C -0.184 4.184 27 H 0.081 0.919 28 H 0.107 0.893 29 H 0.084 0.916 30 H 0.087 0.913 31 H 0.119 0.881 32 H 0.088 0.912 33 H 0.083 0.917 34 H 0.107 0.893 35 H 0.079 0.921 36 H 0.250 0.750 37 H 0.100 0.900 38 H 0.123 0.877 39 H 0.150 0.850 40 H 0.092 0.908 41 H 0.254 0.746 42 H 0.177 0.823 43 H 0.118 0.882 44 H 0.257 0.743 45 H -0.208 1.208 46 H -0.220 1.220 47 H 0.183 0.817 48 H 0.110 0.890 49 H 0.164 0.836 Dipole moment (debyes) X Y Z Total from point charges -3.650 0.437 3.295 4.936 hybrid contribution 2.213 0.461 -0.022 2.261 sum -1.437 0.899 3.273 3.686 Atomic orbital electron populations 1.22472 0.93748 1.03822 1.03602 1.22399 0.94685 0.92546 0.81396 1.21899 1.02395 0.90917 1.04321 1.22480 1.01565 1.02315 0.97384 1.86319 1.71552 1.23239 1.47452 1.18229 0.78716 0.80852 0.82206 1.90912 1.42137 1.70955 1.43974 1.44553 1.55544 1.12641 1.23631 1.21895 1.01616 0.78972 0.96553 1.22305 0.77896 0.98045 0.95528 1.92844 1.36048 1.92532 1.96229 1.24229 1.02010 0.98521 0.95179 1.21878 0.87849 0.97161 0.90920 0.86697 1.44344 1.10080 1.76062 1.02653 1.18507 0.88174 0.92363 0.86667 1.67245 1.23470 1.19926 1.13317 1.22374 0.98592 0.93891 0.87991 1.20292 0.92828 1.06970 0.97312 1.24637 1.10388 0.91239 0.91416 1.86436 1.75090 1.42327 1.33737 0.94093 0.71763 0.77375 0.88997 1.21492 0.99729 0.92996 0.92050 1.18159 0.80416 1.14333 0.92849 1.91484 1.42030 1.93381 1.84653 1.24027 1.06270 0.93155 0.94921 0.91923 0.89324 0.91599 0.91342 0.88114 0.91202 0.91672 0.89268 0.92121 0.75006 0.90046 0.87700 0.85014 0.90774 0.74557 0.82332 0.88213 0.74290 1.20837 1.22018 0.81721 0.89038 0.83624 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.58 8.37 71.98 0.60 0.02 16 2 C 0.13 0.46 1.13 -10.79 -0.01 0.44 16 3 C -0.14 0.17 8.85 71.98 0.64 0.81 16 4 C -0.18 -0.68 8.37 71.98 0.60 -0.08 16 5 O -0.37 -2.51 9.94 -55.50 -0.55 -3.06 16 6 C 0.65 4.82 8.06 129.79 1.05 5.86 16 7 O -0.59 -6.88 11.88 19.80 0.24 -6.64 16 8 N -0.70 -1.42 5.45 -590.83 -3.22 -4.64 16 9 C 0.13 -0.25 5.43 86.38 0.47 0.22 16 10 C 0.08 -0.26 1.73 -10.27 -0.02 -0.28 16 11 F -0.20 -0.31 15.49 44.97 0.70 0.39 16 12 C -0.16 0.57 7.33 31.12 0.23 0.79 16 13 C 0.13 -0.22 4.35 45.52 0.20 -0.02 16 14 H 0.12 -0.07 7.41 -2.39 -0.02 -0.09 16 15 N -0.70 -1.80 5.34 -321.78 -1.72 -3.52 16 16 C 0.38 2.44 7.49 133.08 1.00 3.44 16 17 N -0.52 -3.70 9.13 -193.03 -1.76 -5.46 16 18 C 0.13 0.68 9.84 84.61 0.83 1.52 16 19 C -0.17 -0.57 5.43 -19.77 -0.11 -0.67 16 20 C -0.07 0.21 2.83 71.24 0.20 0.41 16 21 O -0.57 1.50 12.75 -148.98 -1.90 -0.40 16 22 Si 0.77 -3.64 29.82 68.60 2.05 -1.60 16 23 C -0.04 -0.15 9.75 22.48 0.22 0.07 16 24 C -0.03 -0.21 7.35 22.59 0.17 -0.04 16 25 F -0.14 -1.02 16.65 44.97 0.75 -0.27 16 26 C -0.15 0.83 7.28 31.12 0.23 1.05 16 27 H 0.06 0.16 8.14 -2.39 -0.02 0.14 16 28 H 0.09 -0.03 8.14 -2.39 -0.02 -0.05 16 29 H 0.07 0.53 5.88 -2.38 -0.01 0.52 16 30 H 0.07 -0.08 8.14 -2.39 -0.02 -0.10 16 31 H 0.10 -0.49 8.14 -2.39 -0.02 -0.51 16 32 H 0.07 -0.10 8.14 -2.39 -0.02 -0.12 16 33 H 0.06 0.57 5.88 -2.39 -0.01 0.56 16 34 H 0.09 0.00 8.14 -2.39 -0.02 -0.02 16 35 H 0.06 0.21 8.14 -2.39 -0.02 0.19 16 36 H 0.41 0.12 8.14 -92.71 -0.75 -0.63 16 37 H 0.08 -0.06 8.14 -2.39 -0.02 -0.08 16 38 H 0.10 -0.40 7.85 -2.39 -0.02 -0.42 16 39 H 0.13 -0.94 7.90 -2.39 -0.02 -0.96 16 40 H 0.07 -0.02 8.14 -2.39 -0.02 -0.04 16 41 H 0.42 0.98 7.24 -92.71 -0.67 0.31 16 42 H 0.16 0.49 4.88 -2.91 -0.01 0.48 16 43 H 0.10 -0.75 7.96 -2.39 -0.02 -0.77 16 44 H 0.41 -5.33 8.74 -74.06 -0.65 -5.98 16 45 H -0.28 -0.06 7.11 99.48 0.71 0.64 16 46 H -0.29 -0.82 7.11 99.48 0.71 -0.11 16 47 H 0.17 0.12 8.06 -2.91 -0.02 0.10 16 48 H 0.09 -0.43 8.14 -2.39 -0.02 -0.45 16 49 H 0.15 -1.52 8.10 -2.39 -0.02 -1.54 16 Total: 0.00 -20.43 403.72 -0.15 -20.58 By element: Atomic # 1 Polarization: -7.90 SS G_CDS: -1.01 Total: -8.91 kcal Atomic # 6 Polarization: 7.26 SS G_CDS: 6.29 Total: 13.55 kcal Atomic # 7 Polarization: -6.92 SS G_CDS: -6.70 Total: -13.62 kcal Atomic # 8 Polarization: -7.89 SS G_CDS: -2.22 Total: -10.11 kcal Atomic # 9 Polarization: -1.33 SS G_CDS: 1.45 Total: 0.12 kcal Atomic # 14 Polarization: -3.64 SS G_CDS: 2.05 Total: -1.60 kcal Total: -20.43 -0.15 -20.58 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_27_15734492_17656566.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -105.695 kcal (2) G-P(sol) polarization free energy of solvation -20.425 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -126.120 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.153 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.578 kcal (6) G-S(sol) free energy of system = (1) + (5) -126.273 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.69 seconds