Wall clock time and date at job start Thu Mar 4 2021 12:28:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 C 1.53003 * 109.46804 * 2 1 4 4 C 1.52993 * 109.47374 * 239.99584 * 2 1 3 5 5 O 1.45202 * 109.47014 * 119.99677 * 2 1 3 6 6 C 1.34639 * 117.00138 * 60.00246 * 5 2 1 7 7 O 1.21513 * 119.99659 * 0.02562 * 6 5 2 8 8 N 1.34774 * 120.00039 * 179.97438 * 6 5 2 9 9 C 1.46497 * 119.99932 * 179.97438 * 8 6 5 10 10 C 1.52998 * 109.47203 * 180.02562 * 9 8 6 11 11 F 1.39901 * 112.84918 * 316.19743 * 10 9 8 12 12 C 1.53775 * 113.69017 * 87.47048 * 10 9 8 13 13 C 1.53779 * 87.08438 * 139.99386 * 12 10 9 14 14 H 1.09002 * 113.61731 * 89.11293 * 13 12 10 15 15 N 1.46500 * 113.68825 * 220.00754 * 13 12 10 16 16 C 1.38402 * 120.00123 * 254.05729 * 15 13 12 17 17 N 1.32502 * 119.21828 * 359.73794 * 16 15 13 18 18 C 1.32273 * 120.74234 * 179.71605 * 17 16 15 19 19 C 1.38604 * 119.19596 * 0.54072 * 18 17 16 20 20 C 1.50693 * 120.71917 * 179.75505 * 19 18 17 21 21 O 1.42906 * 109.47111 * 244.97873 * 20 19 18 22 22 Si 1.86299 * 109.47332 * 4.97728 * 20 19 18 23 23 C 1.38605 * 118.56027 * 359.73209 * 19 18 17 24 24 N 1.32275 * 119.19319 * 359.97438 * 23 19 18 25 25 C 1.53777 * 113.61649 * 185.00515 * 10 9 8 26 26 H 1.08995 * 109.47527 * 299.99845 * 1 2 3 27 27 H 1.08996 * 109.46851 * 60.00620 * 1 2 3 28 28 H 1.09005 * 109.46699 * 180.02562 * 1 2 3 29 29 H 1.09004 * 109.46929 * 179.97438 * 3 2 1 30 30 H 1.08996 * 109.46911 * 299.99344 * 3 2 1 31 31 H 1.08999 * 109.47553 * 60.00199 * 3 2 1 32 32 H 1.08996 * 109.47345 * 299.99892 * 4 2 1 33 33 H 1.09002 * 109.47050 * 60.00450 * 4 2 1 34 34 H 1.09004 * 109.47085 * 180.02562 * 4 2 1 35 35 H 0.97004 * 120.00158 * 0.02562 * 8 6 5 36 36 H 1.09000 * 109.46697 * 60.00384 * 9 8 6 37 37 H 1.08997 * 109.47634 * 300.00373 * 9 8 6 38 38 H 1.08993 * 113.61636 * 25.43750 * 12 10 9 39 39 H 1.09008 * 113.61006 * 254.53993 * 12 10 9 40 40 H 0.96998 * 119.99853 * 74.06469 * 15 13 12 41 41 H 1.08002 * 120.39989 * 180.25087 * 18 17 16 42 42 H 1.08999 * 109.47450 * 124.97667 * 20 19 18 43 43 H 0.96698 * 113.99830 * 59.99644 * 21 20 19 44 44 H 1.48500 * 110.00280 * 58.68213 * 22 20 19 45 45 H 1.48504 * 110.00218 * 180.02562 * 22 20 19 46 46 H 1.08000 * 120.40187 * 179.97438 * 23 19 18 47 47 H 1.08997 * 113.61941 * 105.38293 * 25 10 9 48 48 H 1.09009 * 113.68972 * 334.49372 * 25 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4426 0.0000 4 6 2.0400 -0.7213 -1.2491 5 8 2.0140 -0.6844 1.1856 6 6 1.6522 -1.9723 1.3385 7 8 0.9517 -2.5097 0.5036 8 7 2.0680 -2.6656 2.4168 9 6 1.6740 -4.0667 2.5834 10 6 2.2741 -4.6147 3.8797 11 9 3.6102 -4.2411 4.0602 12 6 1.3945 -4.3741 5.1178 13 6 1.7846 -5.7903 5.5730 14 1 2.6918 -5.8206 6.1766 15 7 0.6783 -6.5422 6.1704 16 6 0.6375 -6.7428 7.5392 17 7 1.6099 -6.2525 8.2941 18 6 1.5982 -6.4216 9.6059 19 6 0.5586 -7.1307 10.1869 20 6 0.5139 -7.3486 11.6774 21 8 0.6451 -8.7435 11.9590 22 14 1.9123 -6.4182 12.4833 23 6 -0.4392 -7.6346 9.3674 24 7 -0.3704 -7.4247 8.0633 25 6 2.0210 -6.1169 4.0890 26 1 -0.3634 0.5138 0.8899 27 1 -0.3633 0.5137 -0.8900 28 1 -0.3633 -1.0277 0.0005 29 1 3.1300 1.4426 0.0005 30 1 1.6766 1.9563 -0.8900 31 1 1.6766 1.9564 0.8900 32 1 1.6768 -1.7489 -1.2491 33 1 1.6768 -0.2075 -2.1391 34 1 3.1301 -0.7217 -1.2488 35 1 2.6276 -2.2367 3.0830 36 1 2.0398 -4.6499 1.7383 37 1 0.5871 -4.1356 2.6291 38 1 0.3349 -4.2662 4.8864 39 1 1.7681 -3.5867 5.7725 40 1 -0.0255 -6.8995 5.6067 41 1 2.3915 -6.0161 10.2163 42 1 -0.4367 -6.9867 12.0692 43 1 1.4697 -9.1336 11.6381 44 1 1.8052 -4.9702 12.1716 45 1 1.8797 -6.6255 13.9534 46 1 -1.2629 -8.1919 9.7886 47 1 2.9002 -6.7366 3.9129 48 1 1.1329 -6.4870 3.5765 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_27_15734574_12175864.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 12:28:09 Heat of formation + Delta-G solvation = -67.823356 kcal Electronic energy + Delta-G solvation = -31307.921501 eV Core-core repulsion = 26701.761271 eV Total energy + Delta-G solvation = -4606.160230 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 355.174 amu Computer time = 1.13 seconds Orbital eigenvalues (eV) -48.90759 -42.12559 -41.84813 -39.96616 -38.49291 -37.94403 -36.19486 -35.35779 -34.78813 -34.64676 -32.12324 -29.19808 -28.39030 -28.32642 -27.11301 -26.64700 -25.92438 -24.13363 -23.24946 -22.56109 -21.40876 -20.83298 -19.50983 -19.29286 -18.76032 -18.04518 -17.82659 -17.45027 -17.08418 -16.92956 -16.65203 -16.38039 -16.17884 -15.82564 -15.77077 -15.61177 -15.49778 -15.43313 -15.08738 -14.68553 -14.56956 -14.46162 -14.10060 -14.03350 -13.59895 -13.38577 -13.25808 -13.12873 -13.02697 -12.94480 -12.89701 -12.70772 -12.51246 -12.38656 -12.26625 -11.91351 -11.83836 -11.77989 -11.48021 -11.42619 -11.26217 -11.16931 -10.54396 -10.35258 -10.05694 -9.14052 -4.99525 0.03097 0.11869 1.05685 1.32068 1.64393 1.67671 1.78240 1.99291 2.74472 2.91280 2.99701 3.09997 3.16008 3.24065 3.52231 3.56889 3.60410 3.66845 3.71389 3.71781 3.76903 3.80521 3.91807 4.21108 4.25104 4.34489 4.46782 4.54533 4.55800 4.56457 4.59250 4.59476 4.72368 4.73105 4.74244 4.81711 4.84557 4.85180 4.87622 4.98789 5.08128 5.17210 5.24802 5.30347 5.32213 5.51603 5.73916 6.01031 6.24842 6.37621 6.78777 7.23346 7.24742 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.126 3.874 3 C -0.138 4.138 4 C -0.180 4.180 5 O -0.370 6.370 6 C 0.646 3.354 7 O -0.590 6.590 8 N -0.703 5.703 9 C 0.133 3.867 10 C 0.090 3.910 11 F -0.192 7.192 12 C -0.163 4.163 13 C 0.143 3.857 14 H 0.115 0.885 15 N -0.678 5.678 16 C 0.552 3.448 17 N -0.576 5.576 18 C 0.195 3.805 19 C -0.286 4.286 20 C -0.047 4.047 21 O -0.554 6.554 22 Si 0.766 3.234 23 C 0.212 3.788 24 N -0.588 5.588 25 C -0.145 4.145 26 H 0.061 0.939 27 H 0.087 0.913 28 H 0.065 0.935 29 H 0.068 0.932 30 H 0.099 0.901 31 H 0.069 0.931 32 H 0.064 0.936 33 H 0.088 0.912 34 H 0.061 0.939 35 H 0.415 0.585 36 H 0.084 0.916 37 H 0.101 0.899 38 H 0.114 0.886 39 H 0.083 0.917 40 H 0.422 0.578 41 H 0.189 0.811 42 H 0.114 0.886 43 H 0.395 0.605 44 H -0.284 1.284 45 H -0.296 1.296 46 H 0.182 0.818 47 H 0.100 0.900 48 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.092 0.027 0.376 2.126 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.090 3.910 3 C -0.195 4.195 4 C -0.237 4.237 5 O -0.285 6.285 6 C 0.400 3.600 7 O -0.481 6.481 8 N -0.363 5.363 9 C 0.010 3.990 10 C 0.071 3.929 11 F -0.172 7.172 12 C -0.202 4.202 13 C 0.037 3.963 14 H 0.133 0.867 15 N -0.314 5.314 16 C 0.195 3.805 17 N -0.299 5.299 18 C 0.028 3.972 19 C -0.295 4.295 20 C -0.159 4.159 21 O -0.362 6.362 22 Si 0.672 3.328 23 C 0.045 3.955 24 N -0.310 5.310 25 C -0.183 4.183 26 H 0.080 0.920 27 H 0.106 0.894 28 H 0.084 0.916 29 H 0.087 0.913 30 H 0.118 0.882 31 H 0.088 0.912 32 H 0.083 0.917 33 H 0.107 0.893 34 H 0.080 0.920 35 H 0.252 0.748 36 H 0.102 0.898 37 H 0.119 0.881 38 H 0.132 0.868 39 H 0.101 0.899 40 H 0.261 0.739 41 H 0.205 0.795 42 H 0.131 0.869 43 H 0.245 0.755 44 H -0.211 1.211 45 H -0.224 1.224 46 H 0.199 0.801 47 H 0.118 0.882 48 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges 1.613 0.784 -0.359 1.829 hybrid contribution -0.658 -0.037 0.842 1.069 sum 0.955 0.747 0.483 1.305 Atomic orbital electron populations 1.22473 0.93857 1.03795 1.03553 1.22386 0.94597 0.92562 0.81441 1.21899 1.02448 0.90913 1.04274 1.22477 1.01623 1.02305 0.97334 1.86319 1.71533 1.23236 1.47392 1.18232 0.78707 0.80851 0.82228 1.90913 1.42172 1.70961 1.44030 1.44539 1.55533 1.12624 1.23640 1.21865 1.01376 0.79095 0.96622 1.21793 0.77999 0.97876 0.95233 1.92883 1.35576 1.92518 1.96271 1.24234 1.01434 0.99014 0.95553 1.22423 0.90235 0.90299 0.93299 0.86698 1.44112 1.27853 1.58393 1.01020 1.19673 0.85645 0.87073 0.88066 1.67943 1.27844 1.26890 1.07198 1.23180 0.95180 0.89239 0.89602 1.21771 1.00241 1.08037 0.99410 1.24789 1.10119 0.88899 0.92050 1.86484 1.46446 1.21389 1.81893 0.93985 0.83990 0.77109 0.77666 1.23144 0.95928 0.89805 0.86665 1.68000 1.26149 1.21268 1.15585 1.23991 1.05953 0.93524 0.94875 0.91972 0.89386 0.91614 0.91253 0.88194 0.91224 0.91657 0.89347 0.92022 0.74807 0.89809 0.88093 0.86796 0.89871 0.73880 0.79483 0.86893 0.75529 1.21116 1.22414 0.80145 0.88153 0.85119 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.51 8.37 71.98 0.60 0.09 16 2 C 0.13 0.38 1.13 -10.80 -0.01 0.37 16 3 C -0.14 0.25 8.85 71.98 0.64 0.89 16 4 C -0.18 -0.57 8.37 71.98 0.60 0.04 16 5 O -0.37 -2.20 9.94 -55.49 -0.55 -2.75 16 6 C 0.65 4.25 8.06 129.79 1.05 5.30 16 7 O -0.59 -6.47 11.88 19.80 0.24 -6.23 16 8 N -0.70 -0.62 5.45 -590.86 -3.22 -3.84 16 9 C 0.13 -0.40 5.43 86.38 0.47 0.07 16 10 C 0.09 -0.44 1.74 -10.27 -0.02 -0.46 16 11 F -0.19 0.01 16.58 44.97 0.75 0.75 16 12 C -0.16 0.82 7.33 31.12 0.23 1.04 16 13 C 0.14 -0.58 4.20 45.52 0.19 -0.39 16 14 H 0.12 -0.10 7.40 -2.39 -0.02 -0.12 16 15 N -0.68 1.29 5.51 -327.93 -1.81 -0.52 16 16 C 0.55 1.81 8.43 261.49 2.20 4.01 16 17 N -0.58 -1.64 9.15 -197.99 -1.81 -3.45 16 18 C 0.20 -0.21 9.92 84.71 0.84 0.63 16 19 C -0.29 0.43 5.36 -19.69 -0.11 0.33 16 20 C -0.05 0.17 2.83 71.23 0.20 0.37 16 21 O -0.55 1.50 12.85 -148.98 -1.91 -0.41 16 22 Si 0.77 -3.58 29.88 68.60 2.05 -1.53 16 23 C 0.21 0.22 10.99 84.71 0.93 1.15 16 24 N -0.59 -2.49 10.46 -197.99 -2.07 -4.56 16 25 C -0.14 1.11 7.28 31.12 0.23 1.34 16 26 H 0.06 0.14 8.14 -2.39 -0.02 0.12 16 27 H 0.09 -0.05 8.14 -2.39 -0.02 -0.07 16 28 H 0.06 0.51 5.88 -2.38 -0.01 0.49 16 29 H 0.07 -0.13 8.14 -2.38 -0.02 -0.14 16 30 H 0.10 -0.53 8.14 -2.39 -0.02 -0.55 16 31 H 0.07 -0.14 8.14 -2.39 -0.02 -0.16 16 32 H 0.06 0.53 5.88 -2.39 -0.01 0.51 16 33 H 0.09 -0.04 8.14 -2.39 -0.02 -0.06 16 34 H 0.06 0.17 8.14 -2.38 -0.02 0.15 16 35 H 0.42 -0.52 8.14 -92.71 -0.75 -1.28 16 36 H 0.08 -0.18 8.14 -2.39 -0.02 -0.20 16 37 H 0.10 -0.44 7.85 -2.39 -0.02 -0.46 16 38 H 0.11 -0.74 7.90 -2.39 -0.02 -0.75 16 39 H 0.08 -0.25 8.14 -2.38 -0.02 -0.27 16 40 H 0.42 -1.99 8.83 -92.71 -0.82 -2.81 16 41 H 0.19 -1.26 5.07 -2.91 -0.01 -1.28 16 42 H 0.11 -0.34 7.96 -2.39 -0.02 -0.36 16 43 H 0.39 -4.05 8.70 -74.06 -0.64 -4.69 16 44 H -0.28 -0.09 7.11 99.48 0.71 0.62 16 45 H -0.30 -0.95 7.11 99.48 0.71 -0.24 16 46 H 0.18 -0.42 8.06 -2.91 -0.02 -0.44 16 47 H 0.10 -0.75 8.14 -2.39 -0.02 -0.77 16 48 H 0.13 -1.52 8.07 -2.38 -0.02 -1.53 16 Total: 0.00 -20.58 395.36 -1.46 -22.04 By element: Atomic # 1 Polarization: -13.13 SS G_CDS: -1.16 Total: -14.29 kcal Atomic # 6 Polarization: 6.74 SS G_CDS: 8.04 Total: 14.78 kcal Atomic # 7 Polarization: -3.45 SS G_CDS: -8.91 Total: -12.37 kcal Atomic # 8 Polarization: -7.16 SS G_CDS: -2.23 Total: -9.39 kcal Atomic # 9 Polarization: 0.01 SS G_CDS: 0.75 Total: 0.75 kcal Atomic # 14 Polarization: -3.58 SS G_CDS: 2.05 Total: -1.53 kcal Total: -20.58 -1.46 -22.04 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_27_15734574_12175864.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -45.785 kcal (2) G-P(sol) polarization free energy of solvation -20.578 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -66.363 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.460 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.038 kcal (6) G-S(sol) free energy of system = (1) + (5) -67.823 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.14 seconds