Wall clock time and date at job start Thu Mar 4 2021 12:28:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.52996 * 109.47099 * 2 1 4 4 C 1.52998 * 109.47190 * 240.00028 * 2 1 3 5 5 O 1.45198 * 109.47144 * 120.00333 * 2 1 3 6 6 C 1.34640 * 117.00040 * 60.00028 * 5 2 1 7 7 O 1.21503 * 120.00187 * 359.97438 * 6 5 2 8 8 N 1.34783 * 119.99870 * 179.97438 * 6 5 2 9 9 C 1.46496 * 119.99956 * 179.97438 * 8 6 5 10 10 C 1.53002 * 109.47271 * 180.02562 * 9 8 6 11 11 F 1.39895 * 112.84785 * 316.20013 * 10 9 8 12 12 C 1.53956 * 113.66571 * 87.44055 * 10 9 8 13 13 C 1.53773 * 87.01875 * 139.93417 * 12 10 9 14 14 H 1.09001 * 113.61878 * 89.23100 * 13 12 10 15 15 N 1.46498 * 113.61378 * 220.04858 * 13 12 10 16 16 C 1.39005 * 119.99988 * 254.13598 * 15 13 12 17 17 N 1.32398 * 119.70349 * 180.02562 * 16 15 13 18 18 C 1.31974 * 121.61975 * 180.02562 * 17 16 15 19 19 C 1.38021 * 120.85528 * 0.02562 * 18 17 16 20 20 C 1.50707 * 120.33221 * 180.02562 * 19 18 17 21 21 O 1.42903 * 109.46442 * 244.99625 * 20 19 18 22 22 Si 1.86293 * 109.47256 * 4.99192 * 20 19 18 23 23 C 1.38882 * 119.33118 * 0.26579 * 19 18 17 24 24 C 1.38298 * 118.50407 * 359.46831 * 23 19 18 25 25 C 1.53775 * 113.61610 * 184.99980 * 10 9 8 26 26 H 1.09004 * 109.47166 * 299.99462 * 1 2 3 27 27 H 1.08998 * 109.47532 * 59.99973 * 1 2 3 28 28 H 1.09002 * 109.47063 * 179.97438 * 1 2 3 29 29 H 1.08998 * 109.47171 * 179.97438 * 3 2 1 30 30 H 1.09002 * 109.47648 * 300.00206 * 3 2 1 31 31 H 1.08998 * 109.47112 * 60.00194 * 3 2 1 32 32 H 1.08996 * 109.47624 * 300.00065 * 4 2 1 33 33 H 1.09005 * 109.47068 * 59.99985 * 4 2 1 34 34 H 1.09001 * 109.47598 * 179.97438 * 4 2 1 35 35 H 0.96999 * 119.99608 * 0.02562 * 8 6 5 36 36 H 1.09001 * 109.46756 * 60.00089 * 9 8 6 37 37 H 1.09000 * 109.47141 * 300.00457 * 9 8 6 38 38 H 1.09006 * 113.61274 * 25.41002 * 12 10 9 39 39 H 1.08996 * 113.66937 * 254.46638 * 12 10 9 40 40 H 0.97000 * 119.99994 * 74.13963 * 15 13 12 41 41 H 1.07997 * 119.57272 * 179.97438 * 18 17 16 42 42 H 1.08999 * 109.47345 * 124.99695 * 20 19 18 43 43 H 0.96700 * 114.00311 * 60.00230 * 21 20 19 44 44 H 1.48501 * 109.99918 * 58.68485 * 22 20 19 45 45 H 1.48506 * 109.99973 * 180.02562 * 22 20 19 46 46 H 1.08006 * 120.74583 * 179.70151 * 23 19 18 47 47 H 1.07997 * 120.44870 * 180.28088 * 24 23 19 48 48 H 1.08998 * 113.61537 * 105.46702 * 25 10 9 49 49 H 1.09001 * 113.68865 * 334.58083 * 25 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7212 -1.2492 5 8 2.0140 -0.6845 1.1855 6 6 1.6522 -1.9724 1.3382 7 8 0.9509 -2.5095 0.5040 8 7 2.0681 -2.6659 2.4165 9 6 1.6740 -4.0670 2.5830 10 6 2.2742 -4.6151 3.8793 11 9 3.6102 -4.2415 4.0598 12 6 1.3935 -4.3734 5.1187 13 6 1.7825 -5.7904 5.5720 14 1 2.6886 -5.8219 6.1772 15 7 0.6743 -6.5410 6.1676 16 6 0.6308 -6.7424 7.5423 17 7 -0.3732 -7.4221 8.0742 18 6 -0.4526 -7.6353 9.3742 19 6 0.5159 -7.1527 10.2311 20 6 0.4139 -7.4036 11.7136 21 8 0.2344 -6.1607 12.3956 22 14 -1.0408 -8.5158 12.0566 23 6 1.5827 -6.4294 9.7138 24 6 1.6419 -6.2269 8.3470 25 6 2.0210 -6.1173 4.0885 26 1 -0.3634 0.5138 0.8901 27 1 -0.3634 0.5138 -0.8899 28 1 -0.3633 -1.0277 -0.0005 29 1 3.1299 1.4425 0.0005 30 1 1.6766 1.9564 -0.8899 31 1 1.6767 1.9563 0.8900 32 1 1.6767 -1.7489 -1.2493 33 1 1.6766 -0.2074 -2.1392 34 1 3.1300 -0.7209 -1.2495 35 1 2.6277 -2.2369 3.0827 36 1 2.0397 -4.6501 1.7378 37 1 0.5872 -4.1358 2.6287 38 1 0.3339 -4.2646 4.8869 39 1 1.7672 -3.5871 5.7745 40 1 -0.0290 -6.8974 5.6027 41 1 -1.2865 -8.1938 9.7728 42 1 1.3280 -7.8822 12.0649 43 1 -0.5615 -5.6788 12.1323 44 1 -0.8816 -9.7995 11.3273 45 1 -1.1526 -8.7703 13.5154 46 1 2.3508 -6.0372 10.3640 47 1 2.4599 -5.6729 7.9108 48 1 2.9005 -6.7369 3.9137 49 1 1.1337 -6.4876 3.5748 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_27_15734574_13915762.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 12:28:13 Heat of formation + Delta-G solvation = -84.896113 kcal Electronic energy + Delta-G solvation = -31160.260888 eV Core-core repulsion = 26618.786239 eV Total energy + Delta-G solvation = -4541.474649 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 354.179 amu Computer time = 1.31 seconds Orbital eigenvalues (eV) -48.91720 -41.84913 -41.46710 -39.88324 -38.48370 -37.82352 -36.14964 -35.25640 -34.63773 -33.38514 -31.30678 -29.12603 -28.38455 -28.31951 -27.09524 -26.42266 -24.92943 -24.07141 -23.04610 -22.17874 -21.34040 -20.76493 -19.40830 -18.77673 -18.47671 -17.94711 -17.56354 -17.44352 -17.03210 -16.70394 -16.51298 -16.41743 -16.15003 -15.90336 -15.70993 -15.49055 -15.23860 -15.11916 -15.06703 -14.58782 -14.46285 -14.32321 -14.06867 -14.00168 -13.56927 -13.45937 -13.37820 -13.12699 -12.99563 -12.93917 -12.88999 -12.72373 -12.50746 -12.38223 -12.30555 -12.12759 -11.80556 -11.46952 -11.42008 -11.18727 -11.10039 -10.76677 -10.43761 -10.38569 -10.34910 -8.71906 -4.99151 0.21318 0.38839 1.06167 1.34196 1.64504 1.68178 1.97915 2.05598 2.78503 2.92193 2.99458 3.14315 3.23278 3.53397 3.54151 3.57558 3.64497 3.71996 3.77488 3.78960 3.92421 3.98860 4.05645 4.19494 4.32397 4.34796 4.44604 4.52767 4.55660 4.57380 4.59379 4.59830 4.73080 4.74472 4.74945 4.82239 4.84039 4.85887 4.87882 4.97856 5.00810 5.12591 5.18907 5.25324 5.31117 5.32319 5.51597 5.52687 5.99901 6.25432 6.53232 6.80092 7.12946 7.23992 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.126 3.874 3 C -0.138 4.138 4 C -0.180 4.180 5 O -0.370 6.370 6 C 0.646 3.354 7 O -0.590 6.590 8 N -0.702 5.702 9 C 0.132 3.868 10 C 0.088 3.912 11 F -0.192 7.192 12 C -0.163 4.163 13 C 0.135 3.865 14 H 0.117 0.883 15 N -0.704 5.704 16 C 0.396 3.604 17 N -0.561 5.561 18 C 0.148 3.852 19 C -0.237 4.237 20 C -0.054 4.054 21 O -0.557 6.557 22 Si 0.765 3.235 23 C -0.014 4.014 24 C -0.242 4.242 25 C -0.146 4.146 26 H 0.062 0.938 27 H 0.087 0.913 28 H 0.065 0.935 29 H 0.068 0.932 30 H 0.099 0.901 31 H 0.069 0.931 32 H 0.064 0.936 33 H 0.087 0.913 34 H 0.060 0.940 35 H 0.416 0.584 36 H 0.081 0.919 37 H 0.101 0.899 38 H 0.115 0.885 39 H 0.090 0.910 40 H 0.411 0.589 41 H 0.170 0.830 42 H 0.107 0.893 43 H 0.394 0.606 44 H -0.288 1.288 45 H -0.297 1.297 46 H 0.143 0.857 47 H 0.148 0.852 48 H 0.098 0.902 49 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.812 2.504 -0.801 2.751 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.090 3.910 3 C -0.195 4.195 4 C -0.238 4.238 5 O -0.284 6.284 6 C 0.400 3.600 7 O -0.481 6.481 8 N -0.363 5.363 9 C 0.010 3.990 10 C 0.069 3.931 11 F -0.173 7.173 12 C -0.202 4.202 13 C 0.028 3.972 14 H 0.135 0.865 15 N -0.336 5.336 16 C 0.160 3.840 17 N -0.279 5.279 18 C -0.009 4.009 19 C -0.242 4.242 20 C -0.166 4.166 21 O -0.365 6.365 22 Si 0.672 3.328 23 C -0.039 4.039 24 C -0.267 4.267 25 C -0.185 4.185 26 H 0.081 0.919 27 H 0.106 0.894 28 H 0.084 0.916 29 H 0.087 0.913 30 H 0.118 0.882 31 H 0.088 0.912 32 H 0.083 0.917 33 H 0.106 0.894 34 H 0.079 0.921 35 H 0.252 0.748 36 H 0.099 0.901 37 H 0.119 0.881 38 H 0.133 0.867 39 H 0.109 0.891 40 H 0.248 0.752 41 H 0.186 0.814 42 H 0.124 0.876 43 H 0.244 0.756 44 H -0.215 1.215 45 H -0.225 1.225 46 H 0.161 0.839 47 H 0.166 0.834 48 H 0.117 0.883 49 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges -1.329 1.158 -1.273 2.175 hybrid contribution 1.435 0.259 0.464 1.530 sum 0.105 1.417 -0.810 1.635 Atomic orbital electron populations 1.22472 0.93816 1.03796 1.03585 1.22382 0.94624 0.92555 0.81418 1.21896 1.02426 0.90904 1.04299 1.22478 1.01603 1.02294 0.97382 1.86318 1.71526 1.23212 1.47367 1.18243 0.78707 0.80857 0.82238 1.90913 1.42143 1.70983 1.44093 1.44526 1.55544 1.12585 1.23628 1.21863 1.01393 0.79086 0.96707 1.21867 0.78020 0.97803 0.95437 1.92881 1.35611 1.92515 1.96264 1.24304 1.01554 0.98886 0.95446 1.22505 0.90272 0.90723 0.93657 0.86501 1.44441 1.27478 1.59255 1.02417 1.18634 0.89432 0.89528 0.86402 1.67155 1.25639 1.20204 1.14885 1.22457 0.96663 0.94364 0.87431 1.21052 0.99147 1.06542 0.97458 1.24851 1.09696 0.93444 0.88560 1.86459 1.50508 1.34123 1.65375 0.93904 0.83709 0.77889 0.77329 1.21404 0.96032 0.92042 0.94448 1.21670 1.01978 1.08797 0.94249 1.23965 1.05773 0.93546 0.95215 0.91877 0.89427 0.91627 0.91281 0.88229 0.91155 0.91689 0.89375 0.92050 0.74761 0.90110 0.88122 0.86690 0.89135 0.75154 0.81391 0.87593 0.75608 1.21472 1.22493 0.83877 0.83425 0.88343 0.85459 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.42 8.37 71.98 0.60 0.18 16 2 C 0.13 0.32 1.13 -10.80 -0.01 0.30 16 3 C -0.14 0.32 8.85 71.98 0.64 0.96 16 4 C -0.18 -0.50 8.37 71.98 0.60 0.10 16 5 O -0.37 -1.94 9.94 -55.49 -0.55 -2.49 16 6 C 0.65 3.80 8.06 129.79 1.05 4.84 16 7 O -0.59 -6.19 11.88 19.83 0.24 -5.96 16 8 N -0.70 0.08 5.45 -590.85 -3.22 -3.14 16 9 C 0.13 -0.52 5.43 86.38 0.47 -0.05 16 10 C 0.09 -0.58 1.74 -10.21 -0.02 -0.60 16 11 F -0.19 0.38 16.58 44.97 0.75 1.13 16 12 C -0.16 1.29 7.34 31.18 0.23 1.52 16 13 C 0.13 -0.97 3.96 45.51 0.18 -0.79 16 14 H 0.12 -0.81 6.17 -2.39 -0.01 -0.83 16 15 N -0.70 2.79 5.53 -322.06 -1.78 1.01 16 16 C 0.40 0.47 7.65 133.06 1.02 1.49 16 17 N -0.56 -2.16 10.39 -193.27 -2.01 -4.17 16 18 C 0.15 0.17 9.84 84.62 0.83 1.01 16 19 C -0.24 -0.07 5.36 -19.76 -0.11 -0.18 16 20 C -0.05 0.05 2.82 71.24 0.20 0.25 16 21 O -0.56 0.15 12.84 -148.98 -1.91 -1.76 16 22 Si 0.77 -1.54 29.83 68.60 2.05 0.51 16 23 C -0.01 0.00 9.83 22.44 0.22 0.22 16 24 C -0.24 0.09 9.28 22.50 0.21 0.29 16 25 C -0.15 1.32 7.28 31.12 0.23 1.55 16 26 H 0.06 0.10 8.14 -2.39 -0.02 0.08 16 27 H 0.09 -0.09 8.14 -2.39 -0.02 -0.11 16 28 H 0.06 0.47 5.88 -2.39 -0.01 0.46 16 29 H 0.07 -0.16 8.14 -2.39 -0.02 -0.18 16 30 H 0.10 -0.56 8.14 -2.39 -0.02 -0.58 16 31 H 0.07 -0.18 8.14 -2.39 -0.02 -0.20 16 32 H 0.06 0.51 5.88 -2.39 -0.01 0.49 16 33 H 0.09 -0.06 8.14 -2.38 -0.02 -0.08 16 34 H 0.06 0.15 8.14 -2.39 -0.02 0.13 16 35 H 0.42 -1.05 8.14 -92.71 -0.75 -1.81 16 36 H 0.08 -0.20 8.14 -2.39 -0.02 -0.22 16 37 H 0.10 -0.52 7.85 -2.39 -0.02 -0.54 16 38 H 0.11 -1.00 7.90 -2.38 -0.02 -1.02 16 39 H 0.09 -0.66 8.14 -2.39 -0.02 -0.68 16 40 H 0.41 -2.18 8.83 -92.71 -0.82 -2.99 16 41 H 0.17 -0.53 4.91 -2.91 -0.01 -0.55 16 42 H 0.11 0.01 7.96 -2.39 -0.02 -0.01 16 43 H 0.39 -3.14 8.70 -74.06 -0.64 -3.79 16 44 H -0.29 -0.93 7.11 99.48 0.71 -0.22 16 45 H -0.30 -1.59 7.11 99.48 0.71 -0.88 16 46 H 0.14 -0.27 8.06 -2.91 -0.02 -0.29 16 47 H 0.15 -0.61 6.07 -2.91 -0.02 -0.63 16 48 H 0.10 -0.85 8.14 -2.39 -0.02 -0.86 16 49 H 0.13 -1.52 8.07 -2.39 -0.02 -1.54 16 Total: 0.00 -19.34 397.82 -1.28 -20.63 By element: Atomic # 1 Polarization: -15.67 SS G_CDS: -1.17 Total: -16.85 kcal Atomic # 6 Polarization: 4.75 SS G_CDS: 6.34 Total: 11.09 kcal Atomic # 7 Polarization: 0.72 SS G_CDS: -7.01 Total: -6.30 kcal Atomic # 8 Polarization: -7.98 SS G_CDS: -2.23 Total: -10.21 kcal Atomic # 9 Polarization: 0.38 SS G_CDS: 0.75 Total: 1.13 kcal Atomic # 14 Polarization: -1.54 SS G_CDS: 2.05 Total: 0.51 kcal Total: -19.34 -1.28 -20.63 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_27_15734574_13915762.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -64.271 kcal (2) G-P(sol) polarization free energy of solvation -19.340 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -83.611 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.285 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.625 kcal (6) G-S(sol) free energy of system = (1) + (5) -84.896 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.32 seconds