Wall clock time and date at job start Thu Mar 4 2021 12:29:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42906 * 1 3 3 Si 1.86296 * 109.47032 * 2 1 4 4 H 1.48496 * 109.47405 * 179.97438 * 3 2 1 5 5 H 1.48504 * 109.47219 * 299.99909 * 3 2 1 6 6 H 1.48505 * 109.47163 * 59.99618 * 3 2 1 7 7 C 1.50694 * 109.46792 * 119.99877 * 2 1 3 8 8 C 1.38023 * 120.33441 * 244.99953 * 7 2 1 9 9 N 1.31974 * 120.85666 * 180.02562 * 8 7 2 10 10 C 1.32398 * 121.62437 * 0.02562 * 9 8 7 11 11 N 1.38996 * 119.70888 * 179.97438 * 10 9 8 12 12 C 1.46498 * 120.00300 * 179.97438 * 11 10 9 13 13 C 1.52572 * 108.90606 * 277.83389 * 12 11 10 14 14 C 1.54362 * 109.19479 * 161.48329 * 13 12 11 15 15 Si 1.85201 * 107.06520 * 56.71146 * 14 13 12 16 16 C 1.87774 * 111.38043 * 81.20489 * 15 14 13 17 17 C 1.56390 * 98.96323 * 98.19789 * 16 15 14 18 18 C 1.53779 * 109.79001 * 39.37252 * 17 16 15 19 19 C 1.55696 * 111.38959 * 312.19180 * 18 17 16 20 20 C 1.85203 * 110.01728 * 317.20448 * 15 14 13 21 21 C 1.52560 * 108.90893 * 155.00107 * 12 11 10 22 22 C 1.39136 * 120.58424 * 359.97438 * 10 9 8 23 23 C 1.38294 * 119.10285 * 0.02562 * 22 10 9 24 24 H 0.96696 * 114.00022 * 300.00615 * 1 2 3 25 25 H 1.08994 * 109.47245 * 240.00236 * 2 1 3 26 26 H 1.08002 * 119.57370 * 0.02562 * 8 7 2 27 27 H 0.97005 * 120.00162 * 359.97438 * 11 10 9 28 28 H 1.09002 * 108.88082 * 36.37202 * 12 11 10 29 29 H 1.09002 * 109.51578 * 281.39673 * 13 12 11 30 30 H 1.08997 * 109.51727 * 41.56489 * 13 12 11 31 31 H 1.09000 * 109.93270 * 297.32090 * 14 13 12 32 32 H 1.08998 * 110.00308 * 176.14419 * 14 13 12 33 33 H 1.09005 * 111.49348 * 215.64264 * 16 15 14 34 34 H 1.08999 * 111.49381 * 340.76014 * 16 15 14 35 35 H 1.08995 * 109.42005 * 279.27196 * 17 16 15 36 36 H 1.09002 * 109.41602 * 159.46408 * 17 16 15 37 37 H 1.08999 * 109.10675 * 191.68620 * 18 17 16 38 38 H 1.09000 * 109.10782 * 72.70167 * 18 17 16 39 39 H 1.09001 * 111.13983 * 270.08228 * 19 18 17 40 40 H 1.09004 * 111.17820 * 145.89394 * 19 18 17 41 41 H 1.09004 * 109.93242 * 283.40397 * 20 15 14 42 42 H 1.09000 * 110.00623 * 162.22406 * 20 15 14 43 43 H 1.09002 * 109.51705 * 318.43140 * 21 12 11 44 44 H 1.08998 * 109.51975 * 78.53887 * 21 12 11 45 45 H 1.08004 * 120.45058 * 180.02562 * 22 10 9 46 46 H 1.08001 * 120.75312 * 179.97438 * 23 22 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 1 3.5350 1.7565 0.0006 5 1 1.5550 2.4565 -1.2125 6 1 1.5549 2.4565 1.2125 7 6 1.9313 -0.7104 1.2305 8 6 2.6383 -0.0201 2.1941 9 7 3.0833 -0.6320 3.2754 10 6 2.8723 -1.9231 3.4789 11 7 3.3596 -2.5274 4.6319 12 6 3.1294 -3.9554 4.8639 13 6 1.7327 -4.1424 5.4488 14 6 1.2984 -5.6123 5.2660 15 14 2.5872 -6.6649 6.0791 16 6 2.3218 -6.7600 7.9356 17 6 1.5780 -8.1339 8.0054 18 6 2.2116 -9.1201 7.0099 19 6 2.4001 -8.4693 5.6081 20 6 4.2771 -6.0268 5.6706 21 6 4.2209 -4.4887 5.7867 22 6 2.1671 -2.6804 2.5488 23 6 1.6884 -2.0666 1.4058 24 1 -0.3933 0.4418 0.7650 25 1 1.7924 -0.5138 -0.8900 26 1 2.8298 1.0346 2.0616 27 1 3.8522 -2.0035 5.2831 28 1 3.1849 -4.4811 3.9106 29 1 1.7466 -3.8961 6.5106 30 1 1.0307 -3.4883 4.9316 31 1 1.2378 -5.8526 4.2045 32 1 0.3308 -5.7770 5.7398 33 1 3.2694 -6.7909 8.4734 34 1 1.6905 -5.9456 8.2910 35 1 0.5272 -7.9903 7.7541 36 1 1.6565 -8.5376 9.0148 37 1 1.5668 -9.9937 6.9138 38 1 3.1830 -9.4361 7.3900 39 1 1.5213 -8.6232 4.9818 40 1 3.2993 -8.8431 5.1181 41 1 4.5468 -6.3132 4.6540 42 1 5.0069 -6.4263 6.3749 43 1 5.1825 -4.0661 5.4955 44 1 3.9968 -4.2083 6.8159 45 1 1.9959 -3.7334 2.7172 46 1 1.1380 -2.6290 0.6661 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_27_15739292_13915762.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 12:29:59 Heat of formation + Delta-G solvation = -45.046635 kcal Electronic energy + Delta-G solvation = -23154.307086 eV Core-core repulsion = 19973.210846 eV Total energy + Delta-G solvation = -3181.096240 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 306.163 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -41.42581 -39.10041 -37.64333 -36.26142 -34.63876 -33.25641 -32.27970 -31.19551 -29.82205 -27.35183 -25.67321 -24.90669 -24.68463 -23.60421 -22.57201 -21.61675 -20.93616 -18.68196 -18.49701 -17.62059 -16.66282 -16.41833 -16.26950 -16.05664 -15.89937 -15.67502 -15.62567 -15.20150 -14.85960 -14.71300 -14.31615 -14.00382 -13.85300 -13.55122 -13.49318 -13.36345 -13.13221 -12.88478 -12.60346 -12.37906 -12.34704 -12.24828 -12.14803 -12.04925 -11.97200 -11.85209 -11.45953 -11.14155 -10.67013 -10.47404 -10.41595 -10.36748 -10.34575 -10.29441 -8.65974 0.29509 0.48147 1.19379 1.45610 1.53667 1.59511 1.69660 1.73309 1.94444 2.10073 2.50747 2.91204 3.51690 3.55538 3.65397 3.82757 3.89271 3.94284 4.03361 4.04965 4.07180 4.13417 4.14933 4.31068 4.31727 4.38955 4.51210 4.54165 4.58054 4.59997 4.63581 4.68691 4.80385 4.95998 4.99342 5.01425 5.03261 5.08139 5.10076 5.13076 5.20903 5.26032 5.27475 5.37894 5.41864 5.43959 5.57294 6.05137 6.57834 6.59482 7.21344 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.541 6.541 2 C -0.064 4.064 3 Si 0.942 3.058 4 H -0.249 1.249 5 H -0.252 1.252 6 H -0.250 1.250 7 C -0.238 4.238 8 C 0.148 3.852 9 N -0.541 5.541 10 C 0.409 3.591 11 N -0.720 5.720 12 C 0.144 3.856 13 C -0.125 4.125 14 C -0.407 4.407 15 Si 0.991 3.009 16 C -0.405 4.405 17 C -0.122 4.122 18 C -0.119 4.119 19 C -0.408 4.408 20 C -0.406 4.406 21 C -0.116 4.116 22 C -0.240 4.240 23 C -0.003 4.003 24 H 0.375 0.625 25 H 0.115 0.885 26 H 0.148 0.852 27 H 0.405 0.595 28 H 0.083 0.917 29 H 0.070 0.930 30 H 0.071 0.929 31 H 0.079 0.921 32 H 0.083 0.917 33 H 0.078 0.922 34 H 0.078 0.922 35 H 0.063 0.937 36 H 0.065 0.935 37 H 0.062 0.938 38 H 0.061 0.939 39 H 0.077 0.923 40 H 0.078 0.922 41 H 0.080 0.920 42 H 0.085 0.915 43 H 0.074 0.926 44 H 0.073 0.927 45 H 0.135 0.865 46 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.195 -2.201 1.060 2.451 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.346 6.346 2 C -0.176 4.176 3 Si 0.765 3.235 4 H -0.173 1.173 5 H -0.176 1.176 6 H -0.174 1.174 7 C -0.243 4.243 8 C -0.010 4.010 9 N -0.258 5.258 10 C 0.173 3.827 11 N -0.351 5.351 12 C 0.039 3.961 13 C -0.164 4.164 14 C -0.494 4.494 15 Si 1.185 2.815 16 C -0.491 4.491 17 C -0.159 4.159 18 C -0.156 4.156 19 C -0.494 4.494 20 C -0.493 4.493 21 C -0.154 4.154 22 C -0.265 4.265 23 C -0.029 4.029 24 H 0.222 0.778 25 H 0.133 0.867 26 H 0.165 0.835 27 H 0.241 0.759 28 H 0.101 0.899 29 H 0.088 0.912 30 H 0.089 0.911 31 H 0.098 0.902 32 H 0.101 0.899 33 H 0.097 0.903 34 H 0.096 0.904 35 H 0.082 0.918 36 H 0.083 0.917 37 H 0.081 0.919 38 H 0.080 0.920 39 H 0.096 0.904 40 H 0.097 0.903 41 H 0.099 0.901 42 H 0.103 0.897 43 H 0.093 0.907 44 H 0.092 0.908 45 H 0.153 0.847 46 H 0.155 0.845 Dipole moment (debyes) X Y Z Total from point charges 1.034 -1.373 1.115 2.049 hybrid contribution -0.504 -0.558 0.282 0.803 sum 0.531 -1.932 1.397 2.442 Atomic orbital electron populations 1.86505 1.17416 1.81574 1.49096 1.24705 0.84864 1.10140 0.97890 0.85807 0.80722 0.75620 0.81393 1.17255 1.17608 1.17403 1.20938 1.07183 0.96196 1.00009 1.22236 0.91776 0.98962 0.88018 1.67155 1.25887 1.09137 1.23616 1.18406 0.89126 0.88365 0.86762 1.44703 1.60391 1.09268 1.20770 1.21143 0.94753 0.80210 1.00016 1.21843 0.95968 0.96713 1.01870 1.26173 1.11771 1.03689 1.07797 0.79758 0.66713 0.66877 0.68128 1.26661 1.03627 0.99151 1.19676 1.22023 0.99644 0.94567 0.99701 1.21842 1.01150 0.98803 0.93848 1.26506 1.04565 1.19447 0.98930 1.26162 1.18089 0.98999 1.06027 1.21551 0.98473 0.95736 0.99650 1.21524 1.06689 1.01448 0.96813 1.21189 0.93022 0.93317 0.95350 0.77756 0.86679 0.83498 0.75942 0.89897 0.91157 0.91072 0.90221 0.89866 0.90326 0.90363 0.91838 0.91663 0.91918 0.92003 0.90407 0.90289 0.90116 0.89657 0.90738 0.90824 0.84728 0.84538 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.23 12.84 -35.23 -0.45 -0.69 16 2 C -0.06 0.02 2.82 36.00 0.10 0.12 16 3 Si 0.94 -0.34 25.16 -169.99 -4.28 -4.62 16 4 H -0.25 -0.09 7.11 56.52 0.40 0.31 16 5 H -0.25 -0.26 7.11 56.52 0.40 0.15 16 6 H -0.25 0.04 7.04 56.52 0.40 0.44 16 7 C -0.24 -0.25 5.36 -104.46 -0.56 -0.81 16 8 C 0.15 0.32 9.84 -17.57 -0.17 0.14 16 9 N -0.54 -1.90 10.39 -12.44 -0.13 -2.03 16 10 C 0.41 0.89 7.45 -155.03 -1.15 -0.27 16 11 N -0.72 -0.11 5.20 -54.37 -0.28 -0.39 16 12 C 0.14 -0.23 1.72 -68.38 -0.12 -0.35 16 13 C -0.13 0.21 4.95 -26.24 -0.13 0.08 16 14 C -0.41 1.05 4.96 37.87 0.19 1.23 16 15 Si 0.99 -3.22 10.57 -169.99 -1.80 -5.02 16 16 C -0.40 0.74 5.95 38.98 0.23 0.97 16 17 C -0.12 0.12 5.97 -24.50 -0.15 -0.02 16 18 C -0.12 0.11 6.10 -24.89 -0.15 -0.04 16 19 C -0.41 0.73 5.84 38.59 0.23 0.95 16 20 C -0.41 1.16 4.95 37.87 0.19 1.35 16 21 C -0.12 0.28 5.11 -26.25 -0.13 0.14 16 22 C -0.24 -0.25 8.65 -39.23 -0.34 -0.59 16 23 C 0.00 0.00 9.84 -39.32 -0.39 -0.39 16 24 H 0.38 -0.95 8.70 45.56 0.40 -0.55 16 25 H 0.12 -0.13 7.96 -51.93 -0.41 -0.54 16 26 H 0.15 0.10 4.87 -52.49 -0.26 -0.16 16 27 H 0.40 -0.13 8.70 -40.82 -0.36 -0.48 16 28 H 0.08 -0.14 6.19 -51.93 -0.32 -0.46 16 29 H 0.07 -0.14 7.76 -51.93 -0.40 -0.54 16 30 H 0.07 -0.01 7.44 -51.93 -0.39 -0.40 16 31 H 0.08 -0.23 7.97 -51.93 -0.41 -0.64 16 32 H 0.08 -0.20 7.97 -51.93 -0.41 -0.61 16 33 H 0.08 -0.14 8.04 -51.93 -0.42 -0.56 16 34 H 0.08 -0.14 8.04 -51.93 -0.42 -0.56 16 35 H 0.06 -0.08 8.14 -51.93 -0.42 -0.50 16 36 H 0.06 -0.05 8.14 -51.93 -0.42 -0.47 16 37 H 0.06 -0.04 8.14 -51.93 -0.42 -0.47 16 38 H 0.06 -0.06 8.14 -51.93 -0.42 -0.49 16 39 H 0.08 -0.14 8.03 -51.93 -0.42 -0.55 16 40 H 0.08 -0.15 8.03 -51.93 -0.42 -0.57 16 41 H 0.08 -0.23 7.97 -51.93 -0.41 -0.65 16 42 H 0.08 -0.25 7.97 -51.93 -0.41 -0.66 16 43 H 0.07 -0.14 8.13 -51.93 -0.42 -0.56 16 44 H 0.07 -0.22 7.76 -51.93 -0.40 -0.62 16 45 H 0.13 -0.08 6.09 -52.48 -0.32 -0.40 16 46 H 0.14 -0.08 8.06 -52.49 -0.42 -0.50 16 LS Contribution 353.17 15.07 5.32 5.32 Total: 0.00 -4.85 353.17 -11.10 -15.95 By element: Atomic # 1 Polarization: -3.92 SS G_CDS: -7.12 Total: -11.04 kcal Atomic # 6 Polarization: 4.88 SS G_CDS: -2.36 Total: 2.52 kcal Atomic # 7 Polarization: -2.01 SS G_CDS: -0.41 Total: -2.42 kcal Atomic # 8 Polarization: -0.23 SS G_CDS: -0.45 Total: -0.69 kcal Atomic # 14 Polarization: -3.56 SS G_CDS: -6.07 Total: -9.64 kcal Total LS contribution 5.32 Total: 5.32 kcal Total: -4.85 -11.10 -15.95 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_27_15739292_13915762.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -29.097 kcal (2) G-P(sol) polarization free energy of solvation -4.853 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -33.950 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.097 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.949 kcal (6) G-S(sol) free energy of system = (1) + (5) -45.047 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds