Wall clock time and date at job start Thu Mar 4 2021 12:33:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86305 * 109.47152 * 2 1 4 4 H 1.48494 * 109.47122 * 300.00105 * 3 2 1 5 5 H 1.48498 * 109.46989 * 60.00120 * 3 2 1 6 6 H 1.48498 * 109.47141 * 180.02562 * 3 2 1 7 7 C 1.50696 * 109.46986 * 240.00235 * 2 1 3 8 8 C 1.38605 * 120.71969 * 299.99613 * 7 2 1 9 9 N 1.32273 * 119.19655 * 180.02562 * 8 7 2 10 10 C 1.32493 * 120.74480 * 0.02562 * 9 8 7 11 11 N 1.38408 * 119.22280 * 179.97438 * 10 9 8 12 12 C 1.46497 * 119.99965 * 180.02562 * 11 10 9 13 13 C 1.52553 * 108.99296 * 205.00126 * 12 11 10 14 14 C 1.53961 * 109.47306 * 162.08677 * 13 12 11 15 15 Si 1.86525 * 107.22835 * 58.20859 * 14 13 12 16 16 C 1.86519 * 110.13125 * 75.93026 * 15 14 13 17 17 C 1.53960 * 107.22536 * 75.92859 * 16 15 14 18 18 C 1.52554 * 109.47390 * 58.21056 * 17 16 15 19 19 C 1.52554 * 111.83887 * 282.74859 * 18 17 16 20 20 C 1.53835 * 109.54429 * 77.33395 * 19 18 17 21 21 C 1.86518 * 108.14467 * 315.53238 * 15 14 13 22 22 C 1.52550 * 108.99404 * 82.61274 * 12 11 10 23 23 N 1.32499 * 121.56160 * 0.27958 * 10 9 8 24 24 C 1.32273 * 120.74204 * 359.43400 * 23 10 9 25 25 H 0.96701 * 114.00331 * 59.99217 * 1 2 3 26 26 H 1.08996 * 109.47458 * 119.99789 * 2 1 3 27 27 H 1.07994 * 120.40298 * 0.02562 * 8 7 2 28 28 H 0.97001 * 119.99880 * 0.02562 * 11 10 9 29 29 H 1.09002 * 108.91433 * 323.80377 * 12 11 10 30 30 H 1.09004 * 109.47423 * 42.08804 * 13 12 11 31 31 H 1.09004 * 109.47330 * 282.08620 * 13 12 11 32 32 H 1.09009 * 109.90250 * 298.78124 * 14 13 12 33 33 H 1.08995 * 109.90741 * 177.64109 * 14 13 12 34 34 H 1.08994 * 109.90496 * 316.50211 * 16 15 14 35 35 H 1.08999 * 109.90221 * 195.35583 * 16 15 14 36 36 H 1.08999 * 109.47427 * 298.21044 * 17 16 15 37 37 H 1.09001 * 109.46931 * 178.20824 * 17 16 15 38 38 H 1.09002 * 108.99526 * 43.33193 * 18 17 16 39 39 H 1.09001 * 108.99706 * 162.16560 * 18 17 16 40 40 H 1.08994 * 109.47726 * 197.24291 * 19 18 17 41 41 H 1.09003 * 109.46650 * 317.23929 * 19 18 17 42 42 H 1.08997 * 109.91671 * 182.32064 * 20 19 18 43 43 H 1.09005 * 109.93752 * 61.15488 * 20 19 18 44 44 H 1.09000 * 109.89815 * 163.89172 * 21 15 14 45 45 H 1.08997 * 109.90440 * 285.02429 * 21 15 14 46 46 H 1.08996 * 109.46695 * 317.89836 * 22 12 11 47 47 H 1.09000 * 109.46868 * 77.90042 * 22 12 11 48 48 H 1.07995 * 120.40780 * 180.25657 * 24 23 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 1 1.5550 2.4565 -1.2124 5 1 1.5550 2.4565 1.2125 6 1 3.5350 1.7565 -0.0006 7 6 1.9313 -0.7103 -1.2305 8 6 1.6056 -2.0371 -1.4646 9 7 2.0633 -2.6312 -2.5542 10 6 2.8248 -1.9728 -3.4156 11 7 3.2870 -2.6255 -4.5452 12 6 4.1305 -1.9139 -5.5087 13 6 3.9885 -2.5750 -6.8762 14 6 4.4859 -1.6094 -7.9673 15 14 6.2606 -1.1944 -7.5705 16 6 7.3707 -2.6232 -8.0234 17 6 7.5232 -2.6141 -9.5554 18 6 8.1022 -1.2749 -10.0010 19 6 7.0495 -0.1708 -9.9934 20 6 6.8053 0.2974 -8.5485 21 6 6.3802 -0.8427 -5.7426 22 6 5.5736 -1.9332 -5.0144 23 7 3.1592 -0.7060 -3.2183 24 6 2.7303 -0.0516 -2.1519 25 1 -0.3934 0.4418 -0.7650 26 1 1.7923 -0.5138 0.8899 27 1 0.9857 -2.5792 -0.7660 28 1 3.0524 -3.5541 -4.6989 29 1 3.7929 -0.8798 -5.5778 30 1 2.9410 -2.8174 -7.0556 31 1 4.5824 -3.4888 -6.9015 32 1 3.8826 -0.7015 -7.9625 33 1 4.4267 -2.0902 -8.9436 34 1 6.9186 -3.5611 -7.7011 35 1 8.3460 -2.4991 -7.5527 36 1 6.5474 -2.7602 -10.0186 37 1 8.1934 -3.4185 -9.8586 38 1 8.9127 -0.9970 -9.3272 39 1 8.5002 -1.3786 -11.0104 40 1 7.4006 0.6702 -10.5912 41 1 6.1195 -0.5527 -10.4144 42 1 6.0244 1.0577 -8.5315 43 1 7.7264 0.7009 -8.1278 44 1 7.4224 -0.8780 -5.4255 45 1 5.9583 0.1385 -5.5252 46 1 5.5926 -1.7436 -3.9413 47 1 6.0146 -2.9089 -5.2189 48 1 3.0028 0.9821 -1.9986 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_27_15739364_12175864.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 12:33:36 Heat of formation + Delta-G solvation = -34.039983 kcal Electronic energy + Delta-G solvation = -25324.250303 eV Core-core repulsion = 21922.667818 eV Total energy + Delta-G solvation = -3401.582486 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 321.174 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -42.04729 -39.08311 -37.84148 -37.41280 -34.89264 -34.53462 -32.14053 -32.02830 -31.90067 -27.77951 -27.04352 -25.98763 -25.36082 -23.62980 -23.36173 -22.98419 -21.46243 -21.11805 -19.35974 -18.68152 -18.04651 -16.63873 -16.56925 -16.43364 -16.22567 -15.95731 -15.92710 -15.66203 -15.20222 -15.10451 -14.95527 -14.73402 -14.29781 -13.88081 -13.78807 -13.43988 -13.35310 -13.25529 -13.07165 -12.81432 -12.72526 -12.40121 -12.27372 -12.24278 -12.19602 -12.05507 -11.99275 -11.76092 -11.66266 -11.65402 -11.54357 -11.24092 -10.56119 -10.34328 -10.21772 -10.18511 -9.93696 -9.03585 0.11514 0.22224 1.09902 1.37768 1.43969 1.72691 1.74126 1.80855 1.86563 1.90284 2.56209 2.89176 3.18134 3.41829 3.63449 3.71458 3.75213 3.80707 3.93816 4.02865 4.04796 4.17402 4.21602 4.25495 4.30832 4.38783 4.43503 4.53547 4.56898 4.61299 4.70952 4.72368 4.81277 4.84299 4.85898 4.94006 5.04414 5.13370 5.15009 5.16862 5.23135 5.27880 5.31180 5.33377 5.37520 5.39916 5.46859 5.55393 5.85323 6.08250 6.48016 6.49712 7.36399 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.539 6.539 2 C -0.058 4.058 3 Si 0.938 3.062 4 H -0.249 1.249 5 H -0.248 1.248 6 H -0.248 1.248 7 C -0.297 4.297 8 C 0.226 3.774 9 N -0.570 5.570 10 C 0.568 3.432 11 N -0.693 5.693 12 C 0.151 3.849 13 C -0.117 4.117 14 C -0.401 4.401 15 Si 0.997 3.003 16 C -0.405 4.405 17 C -0.109 4.109 18 C -0.132 4.132 19 C -0.109 4.109 20 C -0.407 4.407 21 C -0.403 4.403 22 C -0.115 4.115 23 N -0.559 5.559 24 C 0.191 3.809 25 H 0.376 0.624 26 H 0.119 0.881 27 H 0.172 0.828 28 H 0.413 0.587 29 H 0.093 0.907 30 H 0.071 0.929 31 H 0.071 0.929 32 H 0.079 0.921 33 H 0.081 0.919 34 H 0.073 0.927 35 H 0.075 0.925 36 H 0.062 0.938 37 H 0.061 0.939 38 H 0.064 0.936 39 H 0.061 0.939 40 H 0.061 0.939 41 H 0.063 0.937 42 H 0.074 0.926 43 H 0.075 0.925 44 H 0.077 0.923 45 H 0.080 0.920 46 H 0.067 0.933 47 H 0.063 0.937 48 H 0.159 0.841 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.809 0.814 -1.265 1.709 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.170 4.170 3 Si 0.761 3.239 4 H -0.173 1.173 5 H -0.172 1.172 6 H -0.172 1.172 7 C -0.306 4.306 8 C 0.057 3.943 9 N -0.292 5.292 10 C 0.212 3.788 11 N -0.328 5.328 12 C 0.046 3.954 13 C -0.155 4.155 14 C -0.488 4.488 15 Si 1.191 2.809 16 C -0.492 4.492 17 C -0.146 4.146 18 C -0.170 4.170 19 C -0.147 4.147 20 C -0.493 4.493 21 C -0.489 4.489 22 C -0.154 4.154 23 N -0.281 5.281 24 C 0.023 3.977 25 H 0.223 0.777 26 H 0.137 0.863 27 H 0.189 0.811 28 H 0.251 0.749 29 H 0.111 0.889 30 H 0.090 0.910 31 H 0.089 0.911 32 H 0.098 0.902 33 H 0.100 0.900 34 H 0.092 0.908 35 H 0.094 0.906 36 H 0.081 0.919 37 H 0.080 0.920 38 H 0.083 0.917 39 H 0.080 0.920 40 H 0.079 0.921 41 H 0.081 0.919 42 H 0.093 0.907 43 H 0.094 0.906 44 H 0.096 0.904 45 H 0.098 0.902 46 H 0.085 0.915 47 H 0.082 0.918 48 H 0.176 0.824 Dipole moment (debyes) X Y Z Total from point charges 1.672 0.946 -1.704 2.568 hybrid contribution -0.551 -0.145 0.225 0.613 sum 1.121 0.801 -1.479 2.021 Atomic orbital electron populations 1.86517 1.17218 1.81513 1.49149 1.24612 0.84951 1.10084 0.97363 0.85842 0.80675 0.75522 0.81877 1.17278 1.17195 1.17206 1.21679 1.08228 0.98621 1.02043 1.22827 0.90176 0.90476 0.90821 1.68004 1.16191 1.39309 1.05693 1.19412 0.86713 0.85627 0.87092 1.44403 1.53706 1.14681 1.19999 1.21092 0.89978 0.97682 0.86657 1.21520 1.02521 0.98921 0.92575 1.26171 1.18658 1.02844 1.01092 0.79485 0.67090 0.67706 0.66584 1.26254 1.10026 1.13463 0.99428 1.21238 1.01130 0.97154 0.95106 1.21507 0.98915 0.94850 1.01715 1.21214 0.98974 0.98110 0.96376 1.26222 1.05810 1.13340 1.03974 1.26190 1.02545 1.01686 1.18518 1.21616 0.93850 0.98887 1.01033 1.67946 1.28102 1.08554 1.23525 1.22798 0.88876 0.98895 0.87172 0.77668 0.86305 0.81114 0.74940 0.88879 0.91008 0.91070 0.90226 0.89979 0.90813 0.90624 0.91903 0.92046 0.91681 0.92017 0.92051 0.91866 0.90710 0.90584 0.90419 0.90153 0.91457 0.91827 0.82381 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.36 12.79 -35.23 -0.45 -0.09 16 2 C -0.06 0.08 2.85 36.00 0.10 0.18 16 3 Si 0.94 -1.32 25.15 -169.99 -4.28 -5.59 16 4 H -0.25 0.30 7.11 56.52 0.40 0.70 16 5 H -0.25 -0.03 7.11 56.52 0.40 0.38 16 6 H -0.25 0.20 7.11 56.52 0.40 0.61 16 7 C -0.30 -0.08 5.40 -104.35 -0.56 -0.65 16 8 C 0.23 0.28 10.92 -17.23 -0.19 0.09 16 9 N -0.57 -1.78 10.46 -13.93 -0.15 -1.92 16 10 C 0.57 1.71 8.20 -322.80 -2.65 -0.94 16 11 N -0.69 -0.70 5.19 -56.24 -0.29 -1.00 16 12 C 0.15 -0.02 1.99 -68.39 -0.14 -0.15 16 13 C -0.12 0.18 5.07 -26.46 -0.13 0.05 16 14 C -0.40 0.78 4.97 37.66 0.19 0.97 16 15 Si 1.00 -2.41 9.19 -169.99 -1.56 -3.97 16 16 C -0.41 0.61 4.97 37.66 0.19 0.80 16 17 C -0.11 0.11 5.64 -26.46 -0.15 -0.04 16 18 C -0.13 0.11 5.40 -27.19 -0.15 -0.03 16 19 C -0.11 0.10 5.62 -26.52 -0.15 -0.05 16 20 C -0.41 0.55 4.97 37.59 0.19 0.73 16 21 C -0.40 0.42 4.97 37.65 0.19 0.61 16 22 C -0.12 0.01 5.20 -26.46 -0.14 -0.13 16 23 N -0.56 -1.63 9.18 -13.93 -0.13 -1.76 16 24 C 0.19 0.23 9.92 -17.22 -0.17 0.06 16 25 H 0.38 -1.33 8.70 45.56 0.40 -0.94 16 26 H 0.12 -0.27 7.96 -51.93 -0.41 -0.68 16 27 H 0.17 -0.13 8.06 -52.49 -0.42 -0.55 16 28 H 0.41 -0.08 8.70 -40.82 -0.35 -0.43 16 29 H 0.09 0.09 7.26 -51.93 -0.38 -0.28 16 30 H 0.07 -0.09 8.13 -51.93 -0.42 -0.51 16 31 H 0.07 -0.17 7.72 -51.93 -0.40 -0.57 16 32 H 0.08 -0.14 7.98 -51.92 -0.41 -0.55 16 33 H 0.08 -0.18 7.98 -51.93 -0.41 -0.60 16 34 H 0.07 -0.12 7.98 -51.93 -0.41 -0.54 16 35 H 0.07 -0.10 7.98 -51.93 -0.41 -0.51 16 36 H 0.06 -0.10 7.72 -51.93 -0.40 -0.50 16 37 H 0.06 -0.04 8.14 -51.93 -0.42 -0.47 16 38 H 0.06 -0.05 7.89 -51.93 -0.41 -0.46 16 39 H 0.06 -0.05 8.14 -51.93 -0.42 -0.48 16 40 H 0.06 -0.04 8.14 -51.93 -0.42 -0.46 16 41 H 0.06 -0.09 7.71 -51.93 -0.40 -0.49 16 42 H 0.07 -0.11 7.98 -51.93 -0.41 -0.52 16 43 H 0.08 -0.09 7.98 -51.93 -0.41 -0.50 16 44 H 0.08 -0.09 7.98 -51.93 -0.41 -0.50 16 45 H 0.08 -0.05 7.98 -51.93 -0.41 -0.47 16 46 H 0.07 0.14 7.90 -51.93 -0.41 -0.27 16 47 H 0.06 -0.05 7.72 -51.93 -0.40 -0.45 16 48 H 0.16 -0.12 5.04 -52.49 -0.26 -0.39 16 LS Contribution 368.15 15.07 5.55 5.55 Total: 0.00 -5.18 368.15 -12.54 -17.72 By element: Atomic # 1 Polarization: -2.78 SS G_CDS: -7.66 Total: -10.44 kcal Atomic # 6 Polarization: 5.08 SS G_CDS: -3.57 Total: 1.50 kcal Atomic # 7 Polarization: -4.11 SS G_CDS: -0.57 Total: -4.67 kcal Atomic # 8 Polarization: 0.36 SS G_CDS: -0.45 Total: -0.09 kcal Atomic # 14 Polarization: -3.72 SS G_CDS: -5.84 Total: -9.56 kcal Total LS contribution 5.55 Total: 5.55 kcal Total: -5.18 -12.54 -17.72 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_27_15739364_12175864.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -16.318 kcal (2) G-P(sol) polarization free energy of solvation -5.182 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -21.501 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.539 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.722 kcal (6) G-S(sol) free energy of system = (1) + (5) -34.040 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.76 seconds