Wall clock time and date at job start Thu Mar 4 2021 12:39:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86296 * 109.47175 * 2 1 4 4 C 1.50706 * 109.46817 * 239.99906 * 2 1 3 5 5 C 1.38829 * 120.33710 * 299.72400 * 4 2 1 6 6 C 1.38349 * 118.50648 * 179.76017 * 5 4 2 7 7 C 1.39097 * 119.09247 * 0.55673 * 6 5 4 8 8 N 1.39010 * 119.70055 * 179.70699 * 7 6 5 9 9 C 1.46499 * 120.00380 * 359.97063 * 8 7 6 10 10 H 1.09001 * 112.84256 * 23.80972 * 9 8 7 11 11 C 1.53782 * 113.61402 * 155.00255 * 9 8 7 12 12 C 1.53775 * 87.07827 * 89.11852 * 11 9 8 13 13 H 1.08993 * 113.61927 * 270.87972 * 12 11 9 14 14 C 1.53009 * 113.61044 * 140.06560 * 12 11 9 15 15 F 1.39898 * 109.47031 * 59.99900 * 14 12 11 16 16 F 1.39897 * 109.46806 * 180.02562 * 14 12 11 17 17 F 1.39900 * 109.47026 * 299.99836 * 14 12 11 18 18 C 1.53777 * 113.61830 * 252.50239 * 9 8 7 19 19 N 1.32426 * 120.59194 * 359.68105 * 7 6 5 20 20 C 1.31933 * 121.62093 * 0.02562 * 19 7 6 21 21 H 0.96696 * 113.99586 * 59.99340 * 1 2 3 22 22 H 1.08998 * 109.46695 * 120.00489 * 2 1 3 23 23 H 1.48501 * 109.99808 * 60.00189 * 3 2 1 24 24 H 1.48505 * 109.99923 * 181.31759 * 3 2 1 25 25 H 1.08002 * 120.74991 * 0.02562 * 5 4 2 26 26 H 1.07994 * 120.45540 * 180.25540 * 6 5 4 27 27 H 0.97000 * 119.99755 * 179.97438 * 8 7 6 28 28 H 1.09002 * 113.61201 * 203.67166 * 11 9 8 29 29 H 1.09001 * 113.61423 * 334.48416 * 11 9 8 30 30 H 1.09004 * 113.61413 * 25.43167 * 18 9 8 31 31 H 1.09003 * 113.60978 * 156.33169 * 18 9 8 32 32 H 1.08007 * 119.57317 * 179.97438 * 20 19 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2305 5 6 1.6049 -2.0412 -1.4542 6 6 2.0823 -2.6547 -2.5987 7 6 2.8783 -1.9250 -3.4755 8 7 3.3697 -2.5307 -4.6261 9 6 3.0493 -3.9317 -4.9105 10 1 2.1344 -4.2644 -4.4202 11 6 3.1111 -4.2865 -6.4055 12 6 4.5970 -4.6156 -6.1853 13 1 5.2587 -3.7604 -6.3223 14 6 5.0682 -5.8586 -6.9430 15 9 4.8823 -5.6660 -8.3162 16 9 6.4251 -6.0774 -6.6818 17 9 4.3280 -6.9690 -6.5234 18 6 4.2379 -4.8875 -4.7150 19 7 3.1716 -0.6583 -3.2241 20 6 2.7256 -0.0462 -2.1439 21 1 -0.3932 0.4418 -0.7650 22 1 1.7923 -0.5139 0.8899 23 1 1.5615 2.4678 1.2085 24 1 3.5347 1.7702 -0.0321 25 1 0.9886 -2.5840 -0.7529 26 1 1.8442 -3.6875 -2.8060 27 1 3.9249 -2.0258 -5.2407 28 1 2.5070 -5.1532 -6.6739 29 1 2.9442 -3.4339 -7.0639 30 1 4.9822 -4.5199 -4.0086 31 1 3.9418 -5.9185 -4.5212 32 1 2.9856 0.9878 -1.9714 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_27_15744636_13915762.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 12:39:45 Heat of formation + Delta-G solvation = -110.079919 kcal Electronic energy + Delta-G solvation = -20966.654102 eV Core-core repulsion = 17093.883980 eV Total energy + Delta-G solvation = -3872.770121 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 275.087 amu Computer time = 0.42 seconds Orbital eigenvalues (eV) -51.10409 -48.61905 -48.57395 -41.66467 -40.44325 -37.92046 -35.45063 -33.44376 -31.40503 -29.03027 -27.21769 -26.35143 -25.08649 -24.03309 -22.75338 -20.85996 -19.66495 -19.37355 -19.22974 -18.49384 -18.30576 -17.53981 -16.58480 -16.53431 -16.11153 -15.81965 -15.53663 -15.48562 -15.39212 -15.01767 -14.90883 -14.75817 -14.74549 -14.33136 -14.25190 -14.09568 -13.90451 -13.82538 -13.40096 -12.54483 -12.36202 -12.24492 -12.03859 -11.80268 -11.28676 -10.80396 -10.45132 -10.42945 -8.84333 -5.06078 0.16556 0.35391 1.27973 1.60187 1.68881 1.83964 1.96025 2.56146 2.68299 2.77055 2.81951 3.22159 3.33208 3.43909 3.51270 3.58042 3.67009 3.73070 3.89345 3.99060 4.12880 4.26300 4.29417 4.34976 4.48197 4.50996 4.61291 4.65480 4.72502 4.94636 5.24440 5.42506 5.86621 6.37387 6.55780 7.05993 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.542 6.542 2 C -0.053 4.053 3 Si 0.682 3.318 4 C -0.232 4.232 5 C -0.005 4.005 6 C -0.237 4.237 7 C 0.408 3.592 8 N -0.707 5.707 9 C 0.137 3.863 10 H 0.111 0.889 11 C -0.132 4.132 12 C -0.167 4.167 13 H 0.133 0.867 14 C 0.460 3.540 15 F -0.182 7.182 16 F -0.183 7.183 17 F -0.181 7.181 18 C -0.146 4.146 19 N -0.537 5.537 20 C 0.156 3.844 21 H 0.379 0.621 22 H 0.112 0.888 23 H -0.253 1.253 24 H -0.256 1.256 25 H 0.137 0.863 26 H 0.135 0.865 27 H 0.407 0.593 28 H 0.110 0.890 29 H 0.093 0.907 30 H 0.090 0.910 31 H 0.109 0.891 32 H 0.156 0.844 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.170 0.861 -0.971 2.529 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.347 6.347 2 C -0.165 4.165 3 Si 0.584 3.416 4 C -0.237 4.237 5 C -0.031 4.031 6 C -0.261 4.261 7 C 0.173 3.827 8 N -0.340 5.340 9 C 0.029 3.971 10 H 0.129 0.871 11 C -0.171 4.171 12 C -0.186 4.186 13 H 0.151 0.849 14 C 0.406 3.594 15 F -0.163 7.163 16 F -0.164 7.164 17 F -0.163 7.163 18 C -0.186 4.186 19 N -0.254 5.254 20 C -0.002 4.002 21 H 0.226 0.774 22 H 0.130 0.870 23 H -0.178 1.178 24 H -0.181 1.181 25 H 0.155 0.845 26 H 0.153 0.847 27 H 0.244 0.756 28 H 0.128 0.872 29 H 0.112 0.888 30 H 0.108 0.892 31 H 0.127 0.873 32 H 0.172 0.828 Dipole moment (debyes) X Y Z Total from point charges -1.123 1.386 -0.619 1.888 hybrid contribution 0.104 -1.152 0.242 1.182 sum -1.019 0.234 -0.376 1.111 Atomic orbital electron populations 1.86495 1.17282 1.81657 1.49298 1.24792 0.85060 1.09700 0.96929 0.94857 0.81076 0.78075 0.87572 1.21029 1.05665 0.96612 1.00417 1.21212 0.93798 0.93183 0.94920 1.21510 1.05271 1.02003 0.97365 1.18319 0.89225 0.88502 0.86636 1.44115 1.56212 1.10668 1.22961 1.21711 0.98402 0.80802 0.96137 0.87147 1.23383 0.92775 1.03954 0.96942 1.24088 1.00445 0.95833 0.98262 0.84907 1.20383 0.75225 0.85802 0.78039 1.93205 1.94939 1.95171 1.32999 1.93206 1.33848 1.95615 1.93746 1.93168 1.76913 1.56343 1.89832 1.23653 0.99495 1.01992 0.93416 1.67116 1.27072 1.09027 1.22148 1.22233 0.91488 0.98610 0.87849 0.77401 0.87020 1.17769 1.18085 0.84515 0.84681 0.75621 0.87158 0.88808 0.89167 0.87287 0.82750 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.18 12.78 -35.23 -0.45 -0.27 16 2 C -0.05 0.04 2.83 36.01 0.10 0.14 16 3 Si 0.68 -0.97 29.82 -169.99 -5.07 -6.04 16 4 C -0.23 0.04 5.39 -104.46 -0.56 -0.52 16 5 C -0.01 0.00 9.77 -39.32 -0.38 -0.38 16 6 C -0.24 0.13 9.29 -39.22 -0.36 -0.24 16 7 C 0.41 0.15 7.65 -155.00 -1.19 -1.04 16 8 N -0.71 1.34 5.44 -53.15 -0.29 1.05 16 9 C 0.14 -0.49 4.11 -67.12 -0.28 -0.77 16 10 H 0.11 -0.48 6.10 -51.93 -0.32 -0.80 16 11 C -0.13 0.53 7.18 -25.92 -0.19 0.34 16 12 C -0.17 0.50 3.68 -89.81 -0.33 0.17 16 13 H 0.13 -0.51 8.14 -51.93 -0.42 -0.93 16 14 C 0.46 -0.17 3.02 37.16 0.11 -0.06 16 15 F -0.18 -0.17 17.18 2.25 0.04 -0.13 16 16 F -0.18 -0.25 17.32 2.25 0.04 -0.21 16 17 F -0.18 -0.05 15.76 2.25 0.04 -0.01 16 18 C -0.15 0.49 7.32 -25.92 -0.19 0.30 16 19 N -0.54 -0.91 10.39 -12.44 -0.13 -1.04 16 20 C 0.16 0.06 9.84 -17.57 -0.17 -0.11 16 21 H 0.38 -1.53 8.70 45.56 0.40 -1.13 16 22 H 0.11 -0.04 7.96 -51.93 -0.41 -0.45 16 23 H -0.25 -0.47 7.11 56.52 0.40 -0.07 16 24 H -0.26 -0.24 7.11 56.52 0.40 0.16 16 25 H 0.14 -0.17 8.06 -52.49 -0.42 -0.60 16 26 H 0.14 -0.34 6.03 -52.49 -0.32 -0.66 16 27 H 0.41 -0.95 8.82 -40.82 -0.36 -1.31 16 28 H 0.11 -0.47 7.88 -51.93 -0.41 -0.88 16 29 H 0.09 -0.39 8.14 -51.93 -0.42 -0.82 16 30 H 0.09 -0.23 8.14 -51.93 -0.42 -0.66 16 31 H 0.11 -0.39 7.14 -51.93 -0.37 -0.76 16 32 H 0.16 -0.23 4.88 -52.48 -0.26 -0.49 16 LS Contribution 282.99 15.07 4.26 4.26 Total: 0.00 -5.99 282.99 -7.93 -13.93 By element: Atomic # 1 Polarization: -6.45 SS G_CDS: -2.94 Total: -9.38 kcal Atomic # 6 Polarization: 1.27 SS G_CDS: -3.44 Total: -2.17 kcal Atomic # 7 Polarization: 0.43 SS G_CDS: -0.42 Total: 0.01 kcal Atomic # 8 Polarization: 0.18 SS G_CDS: -0.45 Total: -0.27 kcal Atomic # 9 Polarization: -0.46 SS G_CDS: 0.11 Total: -0.35 kcal Atomic # 14 Polarization: -0.97 SS G_CDS: -5.07 Total: -6.04 kcal Total LS contribution 4.26 Total: 4.26 kcal Total: -5.99 -7.93 -13.93 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_27_15744636_13915762.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -96.153 kcal (2) G-P(sol) polarization free energy of solvation -5.994 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -102.146 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.933 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -13.927 kcal (6) G-S(sol) free energy of system = (1) + (5) -110.080 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.42 seconds