Wall clock time and date at job start Thu Mar 4 2021 12:39:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86296 * 109.47175 * 2 1 4 4 C 1.50706 * 109.46817 * 239.99906 * 2 1 3 5 5 C 1.38829 * 120.33710 * 299.72400 * 4 2 1 6 6 C 1.38349 * 118.50648 * 179.76017 * 5 4 2 7 7 C 1.39097 * 119.09247 * 0.55673 * 6 5 4 8 8 N 1.39010 * 119.70055 * 179.70699 * 7 6 5 9 9 C 1.46499 * 120.00380 * 359.97063 * 8 7 6 10 10 H 1.09001 * 112.84256 * 23.80972 * 9 8 7 11 11 C 1.53782 * 113.61402 * 155.00255 * 9 8 7 12 12 C 1.53775 * 87.07827 * 89.11852 * 11 9 8 13 13 H 1.08993 * 113.61927 * 270.87972 * 12 11 9 14 14 C 1.53009 * 113.61044 * 140.06560 * 12 11 9 15 15 F 1.39898 * 109.47031 * 59.99900 * 14 12 11 16 16 F 1.39897 * 109.46806 * 180.02562 * 14 12 11 17 17 F 1.39900 * 109.47026 * 299.99836 * 14 12 11 18 18 C 1.53777 * 113.61830 * 252.50239 * 9 8 7 19 19 N 1.32426 * 120.59194 * 359.68105 * 7 6 5 20 20 C 1.31933 * 121.62093 * 0.02562 * 19 7 6 21 21 H 0.96696 * 113.99586 * 59.99340 * 1 2 3 22 22 H 1.08998 * 109.46695 * 120.00489 * 2 1 3 23 23 H 1.48501 * 109.99808 * 60.00189 * 3 2 1 24 24 H 1.48505 * 109.99923 * 181.31759 * 3 2 1 25 25 H 1.08002 * 120.74991 * 0.02562 * 5 4 2 26 26 H 1.07994 * 120.45540 * 180.25540 * 6 5 4 27 27 H 0.97000 * 119.99755 * 179.97438 * 8 7 6 28 28 H 1.09002 * 113.61201 * 203.67166 * 11 9 8 29 29 H 1.09001 * 113.61423 * 334.48416 * 11 9 8 30 30 H 1.09004 * 113.61413 * 25.43167 * 18 9 8 31 31 H 1.09003 * 113.60978 * 156.33169 * 18 9 8 32 32 H 1.08007 * 119.57317 * 179.97438 * 20 19 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2305 5 6 1.6049 -2.0412 -1.4542 6 6 2.0823 -2.6547 -2.5987 7 6 2.8783 -1.9250 -3.4755 8 7 3.3697 -2.5307 -4.6261 9 6 3.0493 -3.9317 -4.9105 10 1 2.1344 -4.2644 -4.4202 11 6 3.1111 -4.2865 -6.4055 12 6 4.5970 -4.6156 -6.1853 13 1 5.2587 -3.7604 -6.3223 14 6 5.0682 -5.8586 -6.9430 15 9 4.8823 -5.6660 -8.3162 16 9 6.4251 -6.0774 -6.6818 17 9 4.3280 -6.9690 -6.5234 18 6 4.2379 -4.8875 -4.7150 19 7 3.1716 -0.6583 -3.2241 20 6 2.7256 -0.0462 -2.1439 21 1 -0.3932 0.4418 -0.7650 22 1 1.7923 -0.5139 0.8899 23 1 1.5615 2.4678 1.2085 24 1 3.5347 1.7702 -0.0321 25 1 0.9886 -2.5840 -0.7529 26 1 1.8442 -3.6875 -2.8060 27 1 3.9249 -2.0258 -5.2407 28 1 2.5070 -5.1532 -6.6739 29 1 2.9442 -3.4339 -7.0639 30 1 4.9822 -4.5199 -4.0086 31 1 3.9418 -5.9185 -4.5212 32 1 2.9856 0.9878 -1.9714 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_27_15744636_13915762.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 12:39:45 Heat of formation + Delta-G solvation = -106.803654 kcal Electronic energy + Delta-G solvation = -20966.512032 eV Core-core repulsion = 17093.883980 eV Total energy + Delta-G solvation = -3872.628052 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 275.087 amu Computer time = 0.49 seconds Orbital eigenvalues (eV) -51.11175 -48.63022 -48.60867 -41.55777 -40.25244 -37.84969 -35.32223 -33.39085 -31.31296 -28.90072 -26.93692 -26.28260 -24.99494 -23.93846 -22.66961 -20.67474 -19.59095 -19.37979 -19.15206 -18.41848 -18.20729 -17.41060 -16.51455 -16.36694 -16.04315 -15.70397 -15.54945 -15.47582 -15.30257 -15.04600 -14.80798 -14.78560 -14.74808 -14.31296 -14.17169 -14.01073 -13.70154 -13.56404 -13.33434 -12.41767 -12.22413 -12.14057 -12.00143 -11.57665 -11.14322 -10.75545 -10.41760 -10.36940 -8.73161 -4.98398 0.22156 0.40300 1.35132 1.64139 1.77422 1.98062 2.00592 2.72986 2.80461 2.83693 2.96814 3.39503 3.53962 3.58092 3.62979 3.70711 3.79256 3.90201 4.04456 4.09138 4.32366 4.42857 4.55168 4.60353 4.61865 4.75676 4.79286 4.88497 4.96148 5.03790 5.33386 5.53230 6.01172 6.50511 6.81198 7.12995 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.556 6.556 2 C -0.053 4.053 3 Si 0.765 3.235 4 C -0.234 4.234 5 C -0.013 4.013 6 C -0.239 4.239 7 C 0.397 3.603 8 N -0.703 5.703 9 C 0.139 3.861 10 H 0.122 0.878 11 C -0.125 4.125 12 C -0.163 4.163 13 H 0.141 0.859 14 C 0.455 3.545 15 F -0.191 7.191 16 F -0.196 7.196 17 F -0.186 7.186 18 C -0.143 4.143 19 N -0.563 5.563 20 C 0.145 3.855 21 H 0.394 0.606 22 H 0.107 0.893 23 H -0.298 1.298 24 H -0.287 1.287 25 H 0.145 0.855 26 H 0.154 0.846 27 H 0.408 0.592 28 H 0.116 0.884 29 H 0.099 0.901 30 H 0.083 0.917 31 H 0.113 0.887 32 H 0.166 0.834 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.773 0.604 -1.253 3.102 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.364 6.364 2 C -0.165 4.165 3 Si 0.672 3.328 4 C -0.240 4.240 5 C -0.039 4.039 6 C -0.263 4.263 7 C 0.161 3.839 8 N -0.335 5.335 9 C 0.033 3.967 10 H 0.140 0.860 11 C -0.163 4.163 12 C -0.183 4.183 13 H 0.159 0.841 14 C 0.401 3.599 15 F -0.172 7.172 16 F -0.177 7.177 17 F -0.167 7.167 18 C -0.182 4.182 19 N -0.280 5.280 20 C -0.012 4.012 21 H 0.244 0.756 22 H 0.124 0.876 23 H -0.226 1.226 24 H -0.214 1.214 25 H 0.163 0.837 26 H 0.172 0.828 27 H 0.245 0.755 28 H 0.134 0.866 29 H 0.117 0.883 30 H 0.102 0.898 31 H 0.131 0.869 32 H 0.183 0.817 Dipole moment (debyes) X Y Z Total from point charges -1.739 1.111 -0.933 2.265 hybrid contribution 0.309 -1.102 0.332 1.192 sum -1.431 0.009 -0.601 1.552 Atomic orbital electron populations 1.86456 1.17338 1.82084 1.50513 1.24823 0.85099 1.09987 0.96571 0.93872 0.77884 0.75941 0.85148 1.21054 1.05676 0.96843 1.00393 1.21410 0.93925 0.93285 0.95274 1.21723 1.04769 1.02827 0.96988 1.18566 0.89517 0.88404 0.87388 1.44194 1.55812 1.11186 1.22319 1.21768 0.98634 0.79834 0.96501 0.85992 1.23381 0.91876 1.04318 0.96726 1.24176 1.01244 0.94733 0.98098 0.84113 1.20809 0.74652 0.86573 0.77873 1.93183 1.94933 1.95222 1.33890 1.93178 1.34971 1.95765 1.93791 1.93154 1.76901 1.56836 1.89814 1.23643 0.99406 1.02269 0.92878 1.67119 1.28043 1.09939 1.22910 1.22444 0.91671 0.99243 0.87846 0.75580 0.87558 1.22561 1.21428 0.83685 0.82816 0.75489 0.86570 0.88277 0.89845 0.86872 0.81700 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 0.56 12.78 -148.98 -1.90 -1.34 16 2 C -0.05 0.08 2.83 71.24 0.20 0.28 16 3 Si 0.76 -1.81 29.82 68.60 2.05 0.24 16 4 C -0.23 0.09 5.39 -19.76 -0.11 -0.01 16 5 C -0.01 0.01 9.77 22.44 0.22 0.23 16 6 C -0.24 0.42 9.29 22.50 0.21 0.63 16 7 C 0.40 0.17 7.65 133.04 1.02 1.19 16 8 N -0.70 3.04 5.44 -322.06 -1.75 1.29 16 9 C 0.14 -1.14 4.11 45.52 0.19 -0.95 16 10 H 0.12 -1.25 6.10 -2.39 -0.01 -1.27 16 11 C -0.12 1.11 7.18 31.12 0.22 1.33 16 12 C -0.16 1.04 3.68 -10.27 -0.04 1.00 16 13 H 0.14 -1.13 8.14 -2.39 -0.02 -1.15 16 14 C 0.45 -0.29 3.02 71.99 0.22 -0.07 16 15 F -0.19 -0.39 17.18 44.97 0.77 0.38 16 16 F -0.20 -0.63 17.32 44.97 0.78 0.15 16 17 F -0.19 -0.09 15.76 44.97 0.71 0.62 16 18 C -0.14 1.03 7.32 31.12 0.23 1.26 16 19 N -0.56 -2.00 10.39 -193.26 -2.01 -4.01 16 20 C 0.14 0.13 9.84 84.64 0.83 0.97 16 21 H 0.39 -3.42 8.70 -74.06 -0.64 -4.07 16 22 H 0.11 -0.05 7.96 -2.39 -0.02 -0.07 16 23 H -0.30 -1.52 7.11 99.48 0.71 -0.81 16 24 H -0.29 -0.78 7.11 99.48 0.71 -0.08 16 25 H 0.15 -0.45 8.06 -2.91 -0.02 -0.48 16 26 H 0.15 -0.99 6.03 -2.91 -0.02 -1.01 16 27 H 0.41 -2.03 8.82 -92.71 -0.82 -2.85 16 28 H 0.12 -1.12 7.88 -2.39 -0.02 -1.14 16 29 H 0.10 -0.94 8.14 -2.39 -0.02 -0.96 16 30 H 0.08 -0.45 8.14 -2.38 -0.02 -0.47 16 31 H 0.11 -0.88 7.14 -2.39 -0.02 -0.90 16 32 H 0.17 -0.46 4.88 -2.91 -0.01 -0.47 16 Total: 0.00 -14.11 282.99 1.60 -12.51 By element: Atomic # 1 Polarization: -15.47 SS G_CDS: -0.23 Total: -15.70 kcal Atomic # 6 Polarization: 2.67 SS G_CDS: 3.19 Total: 5.86 kcal Atomic # 7 Polarization: 1.04 SS G_CDS: -3.76 Total: -2.72 kcal Atomic # 8 Polarization: 0.56 SS G_CDS: -1.90 Total: -1.34 kcal Atomic # 9 Polarization: -1.10 SS G_CDS: 2.26 Total: 1.16 kcal Atomic # 14 Polarization: -1.81 SS G_CDS: 2.05 Total: 0.24 kcal Total: -14.11 1.60 -12.51 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_27_15744636_13915762.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -94.297 kcal (2) G-P(sol) polarization free energy of solvation -14.110 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -108.407 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.603 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -12.507 kcal (6) G-S(sol) free energy of system = (1) + (5) -106.804 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.50 seconds