Wall clock time and date at job start Thu Mar 4 2021 12:39:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42908 * 1 3 3 Si 1.86295 * 109.46983 * 2 1 4 4 C 1.50693 * 109.47181 * 240.00038 * 2 1 3 5 5 C 1.37984 * 120.32990 * 119.97781 * 4 2 1 6 6 N 1.32010 * 120.90511 * 179.74528 * 5 4 2 7 7 C 1.32336 * 121.64013 * 0.56627 * 6 5 4 8 8 N 1.39146 * 119.71370 * 179.71226 * 7 6 5 9 9 C 1.46500 * 120.00078 * 359.72293 * 8 7 6 10 10 H 1.08998 * 112.85068 * 23.80917 * 9 8 7 11 11 C 1.53777 * 113.61088 * 155.00188 * 9 8 7 12 12 C 1.53781 * 87.08336 * 89.11940 * 11 9 8 13 13 H 1.09002 * 113.61228 * 270.88201 * 12 11 9 14 14 C 1.53000 * 113.61707 * 140.06298 * 12 11 9 15 15 F 1.39893 * 109.47164 * 61.53046 * 14 12 11 16 16 F 1.39901 * 109.47101 * 181.53323 * 14 12 11 17 17 F 1.39902 * 109.47137 * 301.53064 * 14 12 11 18 18 C 1.53775 * 113.61823 * 252.49786 * 9 8 7 19 19 C 1.39340 * 120.56766 * 359.43373 * 7 6 5 20 20 F 1.35106 * 120.47136 * 180.24979 * 19 7 6 21 21 C 1.38441 * 119.05419 * 0.28029 * 19 7 6 22 22 H 0.96696 * 113.99823 * 59.99871 * 1 2 3 23 23 H 1.09003 * 109.46930 * 119.99648 * 2 1 3 24 24 H 1.48500 * 110.00163 * 298.68330 * 3 2 1 25 25 H 1.48502 * 110.00187 * 60.00157 * 3 2 1 26 26 H 1.07998 * 119.54720 * 0.02562 * 5 4 2 27 27 H 0.96999 * 120.00218 * 179.73128 * 8 7 6 28 28 H 1.08997 * 113.61941 * 334.56647 * 11 9 8 29 29 H 1.09005 * 113.61136 * 203.66812 * 11 9 8 30 30 H 1.08993 * 113.61636 * 156.33149 * 18 9 8 31 31 H 1.09008 * 113.61006 * 25.43391 * 18 9 8 32 32 H 1.08011 * 120.75631 * 180.02562 * 21 19 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 2.7247 -0.0462 -2.1434 6 7 3.1751 -0.6589 -3.2225 7 6 2.8780 -1.9229 -3.4781 8 7 3.3697 -2.5274 -4.6309 9 6 4.2073 -1.7632 -5.5585 10 1 4.7089 -0.9216 -5.0808 11 6 5.1453 -2.6390 -6.4058 12 6 4.0030 -2.7331 -7.4311 13 1 3.3239 -3.5669 -7.2528 14 6 4.4753 -2.6517 -8.8841 15 9 5.3322 -3.7234 -9.1566 16 9 3.3687 -2.7105 -9.7381 17 9 5.1567 -1.4467 -9.0862 18 6 3.4952 -1.3942 -6.8705 19 6 2.0819 -2.6552 -2.5998 20 9 1.7839 -3.9471 -2.8602 21 6 1.6000 -2.0401 -1.4570 22 1 -0.3933 0.4417 -0.7650 23 1 1.7924 -0.5138 0.8901 24 1 1.5879 2.4586 -1.2242 25 1 1.5615 2.4679 1.2085 26 1 2.9845 0.9877 -1.9704 27 1 3.1578 -3.4548 -4.8204 28 1 5.3927 -3.5924 -5.9390 29 1 6.0221 -2.1080 -6.7765 30 1 3.9207 -0.5229 -7.3682 31 1 2.4102 -1.3427 -6.7788 32 1 0.9809 -2.5820 -0.7573 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_27_15744636_17656566.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 12:39:51 Heat of formation + Delta-G solvation = -151.226634 kcal Electronic energy + Delta-G solvation = -23392.435258 eV Core-core repulsion = 19048.426905 eV Total energy + Delta-G solvation = -4344.008353 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 293.078 amu Computer time = 0.56 seconds Orbital eigenvalues (eV) -51.11434 -49.96417 -48.63193 -48.61002 -41.54239 -40.29216 -38.04191 -35.48954 -33.21561 -31.40198 -28.91153 -26.94592 -26.43903 -25.26446 -23.75885 -22.99888 -20.81381 -19.78974 -19.38264 -19.25822 -18.87082 -18.34105 -18.08527 -17.57653 -17.02760 -16.53750 -16.16622 -15.95348 -15.57881 -15.52436 -15.48826 -15.21674 -15.04571 -14.81895 -14.78755 -14.72970 -14.38905 -14.30943 -13.93332 -13.67703 -13.56714 -13.39389 -12.66747 -12.30182 -12.09656 -12.05359 -11.58847 -11.27178 -10.77678 -10.66272 -10.53410 -8.82216 -4.87960 -0.09405 0.08907 1.32702 1.64325 1.76135 1.89206 2.01543 2.51397 2.74288 2.79977 2.96454 3.00638 3.24315 3.41471 3.44758 3.59375 3.60702 3.71187 3.85595 3.93429 4.01095 4.42624 4.47288 4.54646 4.60381 4.65839 4.74260 4.81398 4.86845 4.97302 4.99312 5.40499 5.93304 6.14961 6.50736 6.92615 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.549 6.549 2 C -0.068 4.068 3 Si 0.765 3.235 4 C -0.201 4.201 5 C 0.148 3.852 6 N -0.522 5.522 7 C 0.385 3.615 8 N -0.698 5.698 9 C 0.143 3.857 10 H 0.117 0.883 11 C -0.126 4.126 12 C -0.163 4.163 13 H 0.143 0.857 14 C 0.456 3.544 15 F -0.190 7.190 16 F -0.195 7.195 17 F -0.186 7.186 18 C -0.139 4.139 19 C -0.034 4.034 20 F -0.140 7.140 21 C -0.041 4.041 22 H 0.387 0.613 23 H 0.130 0.870 24 H -0.277 1.277 25 H -0.302 1.302 26 H 0.184 0.816 27 H 0.417 0.583 28 H 0.100 0.900 29 H 0.114 0.886 30 H 0.109 0.891 31 H 0.081 0.919 32 H 0.154 0.846 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.314 1.118 2.260 3.422 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.357 6.357 2 C -0.177 4.177 3 Si 0.670 3.330 4 C -0.206 4.206 5 C -0.009 4.009 6 N -0.239 5.239 7 C 0.147 3.853 8 N -0.331 5.331 9 C 0.037 3.963 10 H 0.135 0.865 11 C -0.164 4.164 12 C -0.182 4.182 13 H 0.161 0.839 14 C 0.402 3.598 15 F -0.172 7.172 16 F -0.176 7.176 17 F -0.167 7.167 18 C -0.178 4.178 19 C -0.061 4.061 20 F -0.119 7.119 21 C -0.067 4.067 22 H 0.236 0.764 23 H 0.147 0.853 24 H -0.203 1.203 25 H -0.231 1.231 26 H 0.200 0.800 27 H 0.256 0.744 28 H 0.118 0.882 29 H 0.132 0.868 30 H 0.127 0.873 31 H 0.100 0.900 32 H 0.172 0.828 Dipole moment (debyes) X Y Z Total from point charges 2.842 2.129 2.039 4.095 hybrid contribution -1.908 -1.415 -0.548 2.437 sum 0.934 0.715 1.491 1.899 Atomic orbital electron populations 1.86589 1.18546 1.80331 1.50249 1.25045 0.83318 1.11613 0.97774 0.94193 0.90139 0.71744 0.76907 1.20918 1.04471 0.94703 1.00484 1.22708 0.91065 0.99956 0.87188 1.67347 1.26692 1.07412 1.22434 1.18493 0.90220 0.89297 0.87323 1.44245 1.54335 1.14551 1.19984 1.21646 0.90928 0.95433 0.88271 0.86472 1.23398 0.96358 1.02658 0.93998 1.24198 1.02866 1.04224 0.86951 0.83920 1.20777 0.74861 0.73086 0.91110 1.93181 1.71900 1.56857 1.95237 1.93178 1.53877 1.96079 1.74490 1.93157 1.80870 1.46627 1.96075 1.23560 1.02409 0.95313 0.96519 1.18122 1.07635 0.80842 0.99457 1.91476 1.92327 1.34065 1.94069 1.21439 0.96040 0.94741 0.94519 0.76401 0.85270 1.20297 1.23056 0.79952 0.74414 0.88188 0.86758 0.87297 0.90040 0.82839 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.28 12.78 -148.98 -1.90 -1.62 16 2 C -0.07 0.28 2.84 71.23 0.20 0.48 16 3 Si 0.77 -4.14 29.82 68.60 2.05 -2.09 16 4 C -0.20 0.57 5.40 -19.77 -0.11 0.46 16 5 C 0.15 -0.43 9.84 84.61 0.83 0.41 16 6 N -0.52 -0.13 9.13 -193.03 -1.76 -1.90 16 7 C 0.38 0.15 7.49 133.08 1.00 1.15 16 8 N -0.70 2.33 5.41 -321.80 -1.74 0.59 16 9 C 0.14 -0.74 4.36 45.51 0.20 -0.54 16 10 H 0.12 -0.46 7.40 -2.39 -0.02 -0.48 16 11 C -0.13 0.89 7.20 31.12 0.22 1.12 16 12 C -0.16 0.84 3.67 -10.27 -0.04 0.81 16 13 H 0.14 -1.09 8.14 -2.39 -0.02 -1.11 16 14 C 0.46 0.13 3.01 71.98 0.22 0.35 16 15 F -0.19 -0.51 17.20 44.97 0.77 0.26 16 16 F -0.19 -0.74 17.32 44.97 0.78 0.04 16 17 F -0.19 -0.32 15.75 44.97 0.71 0.38 16 18 C -0.14 0.67 7.32 31.12 0.23 0.90 16 19 C -0.03 -0.04 7.35 22.58 0.17 0.12 16 20 F -0.14 -0.40 16.65 44.97 0.75 0.35 16 21 C -0.04 0.02 9.75 22.48 0.22 0.24 16 22 H 0.39 -2.28 8.70 -74.06 -0.64 -2.92 16 23 H 0.13 -0.76 7.96 -2.39 -0.02 -0.78 16 24 H -0.28 0.53 7.11 99.48 0.71 1.24 16 25 H -0.30 -0.91 7.11 99.48 0.71 -0.20 16 26 H 0.18 -1.42 4.88 -2.91 -0.01 -1.43 16 27 H 0.42 -2.27 8.17 -92.71 -0.76 -3.03 16 28 H 0.10 -0.84 8.14 -2.39 -0.02 -0.86 16 29 H 0.11 -0.85 7.83 -2.38 -0.02 -0.87 16 30 H 0.11 -0.52 7.18 -2.39 -0.02 -0.53 16 31 H 0.08 -0.28 8.14 -2.38 -0.02 -0.30 16 32 H 0.15 -0.28 8.06 -2.91 -0.02 -0.30 16 Total: 0.00 -12.69 291.10 2.63 -10.06 By element: Atomic # 1 Polarization: -11.42 SS G_CDS: -0.16 Total: -11.58 kcal Atomic # 6 Polarization: 2.36 SS G_CDS: 3.14 Total: 5.50 kcal Atomic # 7 Polarization: 2.20 SS G_CDS: -3.50 Total: -1.30 kcal Atomic # 8 Polarization: 0.28 SS G_CDS: -1.90 Total: -1.62 kcal Atomic # 9 Polarization: -1.97 SS G_CDS: 3.01 Total: 1.04 kcal Atomic # 14 Polarization: -4.14 SS G_CDS: 2.05 Total: -2.09 kcal Total: -12.69 2.63 -10.06 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_27_15744636_17656566.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -141.167 kcal (2) G-P(sol) polarization free energy of solvation -12.689 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -153.856 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.629 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -10.060 kcal (6) G-S(sol) free energy of system = (1) + (5) -151.227 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.56 seconds